RNA–Protein interactions for RNA: ENST00000456150.5

CSPG5-203, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 1 (best) BASIC

Gene CSPG5, Length 2,089 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-203ENST00000456150 PLA2G4AP47712 749 aa22.42■■□□□ 1.18
CSPG5-203ENST00000456150 KRT83P78385 493 aa22.42■■□□□ 1.18
CSPG5-203ENST00000456150 TTYH3Q9C0H2 523 aa22.42■■□□□ 1.18
CSPG5-203ENST00000456150 LRRC27Q9C0I9 530 aa22.42■■□□□ 1.18
CSPG5-203ENST00000456150 ZNF543Q08ER8 600 aa22.41■■□□□ 1.18
CSPG5-203ENST00000456150 UNC13DQ70J99 1090 aa22.41■■□□□ 1.18
CSPG5-203ENST00000456150 ZNF771Q7L3S4 317 aaPredicted RBP22.41■■□□□ 1.18
CSPG5-203ENST00000456150 LARP4BQ92615 738 aaKnown RBP22.41■■□□□ 1.18
CSPG5-203ENST00000456150 NOC4LQ9BVI4 516 aaKnown RBP22.41■■□□□ 1.18
CSPG5-203ENST00000456150 RIC8AQ9NPQ8 531 aa22.41■■□□□ 1.18
CSPG5-203ENST00000456150 PUF60Q9UHX1 559 aaKnown RBP22.41■■□□□ 1.18
CSPG5-203ENST00000456150 REXO2Q9Y3B8 237 aaKnown RBP22.41■■□□□ 1.18
CSPG5-203ENST00000456150 RIMBP2O15034 1052 aa22.4■■□□□ 1.18
CSPG5-203ENST00000456150 CYLC1P35663 651 aaPredicted RBP22.4■■□□□ 1.18
CSPG5-203ENST00000456150 ZBED6P86452 979 aa22.4■■□□□ 1.18
CSPG5-203ENST00000456150 FKBP15Q5T1M5 1219 aa22.4■■□□□ 1.18
CSPG5-203ENST00000456150 ZNF662Q6ZS27 426 aa22.4■■□□□ 1.18
CSPG5-203ENST00000456150 ZSCAN29Q8IWY8 852 aaPredicted RBP22.4■■□□□ 1.18
CSPG5-203ENST00000456150 KIAA0895Q8NCT3 520 aa22.4■■□□□ 1.18
CSPG5-203ENST00000456150 GPCPD1Q9NPB8 672 aa22.4■■□□□ 1.18
CSPG5-203ENST00000456150 BLOC1S4Q9NUP1 217 aa22.4■■□□□ 1.18
CSPG5-203ENST00000456150 TBC1D8O95759 1140 aa22.4■■□□□ 1.18
CSPG5-203ENST00000456150 ALDH1B1P30837 517 aa22.4■■□□□ 1.18
CSPG5-203ENST00000456150 FIGNQ5HY92 759 aa22.4■■□□□ 1.18
CSPG5-203ENST00000456150 GPATCH4Q5T3I0 446 aaKnown RBP22.4■■□□□ 1.18
CSPG5-203ENST00000456150 KRT79Q5XKE5 535 aa22.4■■□□□ 1.18
CSPG5-203ENST00000456150 PPP4R3AQ6IN85 833 aa22.4■■□□□ 1.18
CSPG5-203ENST00000456150 CENPPQ6IPU0 288 aa22.4■■□□□ 1.18
CSPG5-203ENST00000456150 WDR59Q6PJI9 974 aa22.4■■□□□ 1.18
CSPG5-203ENST00000456150 ERGIC2Q96RQ1 377 aa22.4■■□□□ 1.18
CSPG5-203ENST00000456150 ZSWIM4Q9H7M6 989 aa22.4■■□□□ 1.18
CSPG5-203ENST00000456150 MYH4Q9Y623 1939 aa22.39■■□□□ 1.18
CSPG5-203ENST00000456150 A0A1W2PQJ5 194 aa22.39■■□□□ 1.17
CSPG5-203ENST00000456150 SLC37A4O43826 429 aa22.39■■□□□ 1.17
CSPG5-203ENST00000456150 TDP2O95551 362 aa22.39■■□□□ 1.17
CSPG5-203ENST00000456150 FGFR1OPO95684 399 aaKnown RBP22.39■■□□□ 1.17
CSPG5-203ENST00000456150 ABL1P00519 1130 aa22.39■■□□□ 1.17
CSPG5-203ENST00000456150 EIF6P56537 245 aaKnown RBP22.39■■□□□ 1.17
CSPG5-203ENST00000456150 CCDC170Q8IYT3 715 aa22.39■■□□□ 1.17
CSPG5-203ENST00000456150 EHBP1Q8NDI1 1231 aa22.39■■□□□ 1.17
CSPG5-203ENST00000456150 PNMA5Q96PV4 448 aa22.39■■□□□ 1.17
CSPG5-203ENST00000456150 ZC3H12CQ9C0D7 883 aaKnown RBP22.39■■□□□ 1.17
CSPG5-203ENST00000456150 JMJD4Q9H9V9 463 aa22.39■■□□□ 1.17
CSPG5-203ENST00000456150 DDX4Q9NQI0 724 aaKnown RBP22.39■■□□□ 1.17
CSPG5-203ENST00000456150 USP40Q9NVE5 1235 aa22.39■■□□□ 1.17
CSPG5-203ENST00000456150 F8W031 263 aaPredicted RBP22.38■■□□□ 1.17
CSPG5-203ENST00000456150 H0YIN7 160 aa22.38■■□□□ 1.17
CSPG5-203ENST00000456150 HLA-DOAP06340 250 aa22.38■■□□□ 1.17
CSPG5-203ENST00000456150 MCM6Q14566 821 aa22.38■■□□□ 1.17
CSPG5-203ENST00000456150 ADGRF4Q8IZF3 695 aa22.38■■□□□ 1.17
CSPG5-203ENST00000456150 CUL5Q93034 780 aa22.38■■□□□ 1.17
CSPG5-203ENST00000456150 PCMTD1Q96MG8 357 aaPredicted RBP22.38■■□□□ 1.17
CSPG5-203ENST00000456150 GUCA1BQ9UMX6 200 aa22.38■■□□□ 1.17
CSPG5-203ENST00000456150 GREB1LQ9C091 1923 aaPredicted RBP22.38■■□□□ 1.17
CSPG5-203ENST00000456150 CTAGE15A4D2H0 777 aa22.38■■□□□ 1.17
CSPG5-203ENST00000456150 MYMKA6NI61 221 aa22.38■■□□□ 1.17
CSPG5-203ENST00000456150 IPO7O95373 1038 aaKnown RBP22.38■■□□□ 1.17
CSPG5-203ENST00000456150 CTAGE8P0CG41 777 aa22.38■■□□□ 1.17
CSPG5-203ENST00000456150 MIIPQ5JXC2 388 aa22.38■■□□□ 1.17
CSPG5-203ENST00000456150 CTAGE6Q86UF2 777 aa22.38■■□□□ 1.17
CSPG5-203ENST00000456150 CTAGE4Q8IX94 777 aa22.38■■□□□ 1.17
CSPG5-203ENST00000456150 MSANTD4Q8NCY6 345 aa22.38■■□□□ 1.17
CSPG5-203ENST00000456150 SNX29Q8TEQ0 813 aa22.38■■□□□ 1.17
CSPG5-203ENST00000456150 RAD54LQ92698 747 aa22.38■■□□□ 1.17
CSPG5-203ENST00000456150 SLC39A2Q9NP94 309 aa22.38■■□□□ 1.17
CSPG5-203ENST00000456150 MYO6Q9UM54 1294 aa22.38■■□□□ 1.17
CSPG5-203ENST00000456150 ABCB11O95342 1321 aa22.37■■□□□ 1.17
CSPG5-203ENST00000456150 PSMD14O00487 310 aa22.37■■□□□ 1.17
CSPG5-203ENST00000456150 TNNI2P48788 182 aa22.37■■□□□ 1.17
CSPG5-203ENST00000456150 GUF1Q8N442 669 aaKnown RBP22.37■■□□□ 1.17
CSPG5-203ENST00000456150 CERS5Q8N5B7 392 aa22.37■■□□□ 1.17
CSPG5-203ENST00000456150 SEMA6BQ9H3T3 888 aa22.37■■□□□ 1.17
CSPG5-203ENST00000456150 SHMT1P34896 483 aa22.37■■□□□ 1.17
CSPG5-203ENST00000456150 CLK2P49760 499 aaKnown RBP22.37■■□□□ 1.17
CSPG5-203ENST00000456150 MRPL12P52815 198 aaKnown RBP22.37■■□□□ 1.17
CSPG5-203ENST00000456150 HERVK_113P62684 666 aa22.37■■□□□ 1.17
CSPG5-203ENST00000456150 CDK17Q00537 523 aa22.37■■□□□ 1.17
CSPG5-203ENST00000456150 AMPD2Q01433 879 aa22.37■■□□□ 1.17
CSPG5-203ENST00000456150 HHIPL2Q6UWX4 724 aa22.37■■□□□ 1.17
CSPG5-203ENST00000456150 KIAA1328Q86T90 577 aa22.37■■□□□ 1.17
CSPG5-203ENST00000456150 HNRNPLLQ8WVV9 542 aaKnown RBP22.37■■□□□ 1.17
CSPG5-203ENST00000456150 NAP1L4Q99733 375 aaKnown RBP22.37■■□□□ 1.17
CSPG5-203ENST00000456150 ANKZF1Q9H8Y5 726 aa22.37■■□□□ 1.17
CSPG5-203ENST00000456150 ST7Q9NRC1 585 aa22.37■■□□□ 1.17
CSPG5-203ENST00000456150 AGPAT5Q9NUQ2 364 aa22.37■■□□□ 1.17
CSPG5-203ENST00000456150 KRT86O43790 486 aa22.36■■□□□ 1.17
CSPG5-203ENST00000456150 ZBTB7AO95365 584 aa22.36■■□□□ 1.17
CSPG5-203ENST00000456150 GCFC2P16383 781 aaKnown RBP22.36■■□□□ 1.17
CSPG5-203ENST00000456150 LRRC63Q05C16 580 aa22.36■■□□□ 1.17
CSPG5-203ENST00000456150 PSMD2Q13200 908 aa22.36■■□□□ 1.17
CSPG5-203ENST00000456150 TMEM119Q4V9L6 283 aa22.36■■□□□ 1.17
CSPG5-203ENST00000456150 CCDC122Q5T0U0 273 aa22.36■■□□□ 1.17
CSPG5-203ENST00000456150 ZNF219Q9P2Y4 722 aaPredicted RBP22.36■■□□□ 1.17
CSPG5-203ENST00000456150 RAB21Q9UL25 225 aa22.36■■□□□ 1.17
CSPG5-203ENST00000456150 GOLGB1Q14789 3259 aaKnown RBP22.36■■□□□ 1.17
CSPG5-203ENST00000456150 POTEMA6NI47 508 aa22.35■■□□□ 1.17
CSPG5-203ENST00000456150 RASSF10A6NK89 507 aa22.35■■□□□ 1.17
CSPG5-203ENST00000456150 EIF3CLB5ME19 914 aaKnown RBP22.35■■□□□ 1.17
CSPG5-203ENST00000456150 EDIL3O43854 480 aa22.35■■□□□ 1.17
CSPG5-203ENST00000456150 ERLIN1O75477 346 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms