RNA–Protein interactions for RNA: ENST00000456019.1

COL13A1-206, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 2

Gene COL13A1, Length 749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-206ENST00000456019 CPT1AP50416 773 aa20.56■□□□□ 0.88
COL13A1-206ENST00000456019 HOMER1Q86YM7 354 aa20.56■□□□□ 0.88
COL13A1-206ENST00000456019 TMTC2Q8N394 836 aa20.56■□□□□ 0.88
COL13A1-206ENST00000456019 SAMD3Q8N6K7 520 aa20.56■□□□□ 0.88
COL13A1-206ENST00000456019 OR6J1Q8NGC5 347 aa20.56■□□□□ 0.88
COL13A1-206ENST00000456019 TMEM87BQ96K49 555 aa20.56■□□□□ 0.88
COL13A1-206ENST00000456019 MAP3K14Q99558 947 aa20.56■□□□□ 0.88
COL13A1-206ENST00000456019 MAP3K20Q9NYL2 800 aaKnown RBP20.56■□□□□ 0.88
COL13A1-206ENST00000456019 TBX21Q9UL17 535 aa20.56■□□□□ 0.88
COL13A1-206ENST00000456019 MYH6P13533 1939 aa20.55■□□□□ 0.88
COL13A1-206ENST00000456019 DDAH1O94760 285 aa20.55■□□□□ 0.88
COL13A1-206ENST00000456019 HSD17B4P51659 736 aa20.55■□□□□ 0.88
COL13A1-206ENST00000456019 GHRHRQ02643 423 aa20.55■□□□□ 0.88
COL13A1-206ENST00000456019 TTLL4Q14679 1199 aa20.55■□□□□ 0.88
COL13A1-206ENST00000456019 SLC35G1Q2M3R5 365 aa20.55■□□□□ 0.88
COL13A1-206ENST00000456019 BRDTQ58F21 947 aaPredicted RBP20.55■□□□□ 0.88
COL13A1-206ENST00000456019 RNF20Q5VTR2 975 aa20.55■□□□□ 0.88
COL13A1-206ENST00000456019 ARHGEF16Q5VV41 709 aa20.55■□□□□ 0.88
COL13A1-206ENST00000456019 FAM126BQ8IXS8 530 aa20.55■□□□□ 0.88
COL13A1-206ENST00000456019 ZNF654Q8IZM8 581 aa20.55■□□□□ 0.88
COL13A1-206ENST00000456019 SLC43A3Q8NBI5 491 aa20.55■□□□□ 0.88
COL13A1-206ENST00000456019 PIGSQ96S52 555 aa20.55■□□□□ 0.88
COL13A1-206ENST00000456019 POLR3EQ9NVU0 708 aa20.55■□□□□ 0.88
COL13A1-206ENST00000456019 SZT2Q5T011 3432 aa20.55■□□□□ 0.88
COL13A1-206ENST00000456019 PNMA6FA0A0J9YX94 578 aa20.54■□□□□ 0.88
COL13A1-206ENST00000456019 OPLAHO14841 1288 aa20.54■□□□□ 0.88
COL13A1-206ENST00000456019 CYTH3O43739 400 aa20.54■□□□□ 0.88
COL13A1-206ENST00000456019 CDC45O75419 566 aa20.54■□□□□ 0.88
COL13A1-206ENST00000456019 TIMP1P01033 207 aa20.54■□□□□ 0.88
COL13A1-206ENST00000456019 TXNP10599 105 aaKnown RBP20.54■□□□□ 0.88
COL13A1-206ENST00000456019 KIF5BP33176 963 aa20.54■□□□□ 0.88
COL13A1-206ENST00000456019 ITGA7Q13683 1181 aa20.54■□□□□ 0.88
COL13A1-206ENST00000456019 STXBP2Q15833 593 aa20.54■□□□□ 0.88
COL13A1-206ENST00000456019 CTCFLQ8NI51 663 aaPredicted RBP20.54■□□□□ 0.88
COL13A1-206ENST00000456019 LAMA3Q16787 3333 aa20.53■□□□□ 0.88
COL13A1-206ENST00000456019 SH2B2O14492 632 aaPredicted RBP20.53■□□□□ 0.88
COL13A1-206ENST00000456019 FPGSQ05932 587 aa20.53■□□□□ 0.88
COL13A1-206ENST00000456019 SHHQ15465 462 aa20.53■□□□□ 0.88
COL13A1-206ENST00000456019 NFXL1Q6ZNB6 911 aa20.53■□□□□ 0.88
COL13A1-206ENST00000456019 GPHNQ9NQX3 736 aaPredicted RBP20.53■□□□□ 0.88
COL13A1-206ENST00000456019 PXMP2Q9NR77 195 aa20.53■□□□□ 0.88
COL13A1-206ENST00000456019 GRIN2DO15399 1336 aa20.53■□□□□ 0.88
COL13A1-206ENST00000456019 CCDC69A6NI79 296 aa20.52■□□□□ 0.88
COL13A1-206ENST00000456019 CD4P01730 458 aa20.52■□□□□ 0.88
COL13A1-206ENST00000456019 EIF2AK2P19525 551 aaKnown RBP20.52■□□□□ 0.88
COL13A1-206ENST00000456019 LIFRP42702 1097 aa20.52■□□□□ 0.88
COL13A1-206ENST00000456019 C9orf50Q5SZB4 431 aa20.52■□□□□ 0.88
COL13A1-206ENST00000456019 SEPT14Q6ZU15 432 aa20.52■□□□□ 0.88
COL13A1-206ENST00000456019 LZTS2Q9BRK4 669 aa20.52■□□□□ 0.88
COL13A1-206ENST00000456019 MYL10Q9BUA6 226 aa20.52■□□□□ 0.88
COL13A1-206ENST00000456019 A6NJR5 290 aa20.51■□□□□ 0.87
COL13A1-206ENST00000456019 GCOM1H8Y6P7 765 aaPredicted RBP20.51■□□□□ 0.87
COL13A1-206ENST00000456019 KPNA6O60684 536 aa20.51■□□□□ 0.87
COL13A1-206ENST00000456019 EIF3JO75822 258 aaKnown RBP20.51■□□□□ 0.87
COL13A1-206ENST00000456019 ARIH2O95376 493 aa20.51■□□□□ 0.87
COL13A1-206ENST00000456019 NR3C2P08235 984 aa20.51■□□□□ 0.87
COL13A1-206ENST00000456019 MYL3P08590 195 aa20.51■□□□□ 0.87
COL13A1-206ENST00000456019 POLR2MP0CAP2 368 aa20.51■□□□□ 0.87
COL13A1-206ENST00000456019 SMARCA1P28370 1054 aa20.51■□□□□ 0.87
COL13A1-206ENST00000456019 GNAQP50148 359 aa20.51■□□□□ 0.87
COL13A1-206ENST00000456019 PSMC6P62333 389 aa20.51■□□□□ 0.87
COL13A1-206ENST00000456019 PURAQ00577 322 aaKnown RBP20.51■□□□□ 0.87
COL13A1-206ENST00000456019 MFSD5Q6N075 450 aa20.51■□□□□ 0.87
COL13A1-206ENST00000456019 CCDC62Q6P9F0 684 aa20.51■□□□□ 0.87
COL13A1-206ENST00000456019 COPS5Q92905 334 aa20.51■□□□□ 0.87
COL13A1-206ENST00000456019 SPZ1Q9BXG8 430 aa20.51■□□□□ 0.87
COL13A1-206ENST00000456019 CALM1P0DP23 149 aa20.5■□□□□ 0.87
COL13A1-206ENST00000456019 CALM2P0DP24 149 aa20.5■□□□□ 0.87
COL13A1-206ENST00000456019 CALM3P0DP25 149 aa20.5■□□□□ 0.87
COL13A1-206ENST00000456019 HOXA13P31271 388 aaPredicted RBP20.5■□□□□ 0.87
COL13A1-206ENST00000456019 RRP36Q96EU6 259 aaKnown RBP20.5■□□□□ 0.87
COL13A1-206ENST00000456019 PDCD2LQ9BRP1 358 aa20.5■□□□□ 0.87
COL13A1-206ENST00000456019 MTG1Q9BT17 334 aaPredicted RBP20.5■□□□□ 0.87
COL13A1-206ENST00000456019 GH1P01241 217 aa20.49■□□□□ 0.87
COL13A1-206ENST00000456019 EPHB4P54760 987 aa20.49■□□□□ 0.87
COL13A1-206ENST00000456019 COL9A3Q14050 684 aaPredicted RBP20.49■□□□□ 0.87
COL13A1-206ENST00000456019 LY6KQ17RY6 165 aa20.49■□□□□ 0.87
COL13A1-206ENST00000456019 DEFB123Q8N688 67 aa20.49■□□□□ 0.87
COL13A1-206ENST00000456019 PIBF1Q8WXW3 757 aa20.49■□□□□ 0.87
COL13A1-206ENST00000456019 SLC12A7Q9Y666 1083 aa20.49■□□□□ 0.87
COL13A1-206ENST00000456019 PPIGQ13427 754 aaKnown RBP eCLIP20.48■□□□□ 0.87
COL13A1-206ENST00000456019 TMEM199Q8N511 208 aa20.48■□□□□ 0.87
COL13A1-206ENST00000456019 RNPC3Q96LT9 517 aaKnown RBP20.48■□□□□ 0.87
COL13A1-206ENST00000456019 NEK1Q96PY6 1258 aa20.48■□□□□ 0.87
COL13A1-206ENST00000456019 LRRC2Q9BYS8 371 aa20.48■□□□□ 0.87
COL13A1-206ENST00000456019 PPP1R12CQ9BZL4 782 aa20.48■□□□□ 0.87
COL13A1-206ENST00000456019 TRPV6Q9H1D0 765 aa20.48■□□□□ 0.87
COL13A1-206ENST00000456019 ALDH8A1Q9H2A2 487 aaPredicted RBP20.48■□□□□ 0.87
COL13A1-206ENST00000456019 SEC63Q9UGP8 760 aaKnown RBP20.48■□□□□ 0.87
COL13A1-206ENST00000456019 B4GALT4O60513 344 aa20.47■□□□□ 0.87
COL13A1-206ENST00000456019 NEFLP07196 543 aa20.47■□□□□ 0.87
COL13A1-206ENST00000456019 MYCLP12524 364 aaPredicted RBP20.47■□□□□ 0.87
COL13A1-206ENST00000456019 ARHGAP1Q07960 439 aa20.47■□□□□ 0.87
COL13A1-206ENST00000456019 PGM5Q15124 567 aa20.47■□□□□ 0.87
COL13A1-206ENST00000456019 TSGA10IPQ3SY00 556 aa20.47■□□□□ 0.87
COL13A1-206ENST00000456019 VSIG10LQ86VR7 867 aa20.47■□□□□ 0.87
COL13A1-206ENST00000456019 SGMS1Q86VZ5 419 aa20.47■□□□□ 0.87
COL13A1-206ENST00000456019 FCHSD1Q86WN1 690 aa20.47■□□□□ 0.87
COL13A1-206ENST00000456019 HIPK3Q9H422 1215 aa20.47■□□□□ 0.87
COL13A1-206ENST00000456019 DDX41Q9UJV9 622 aaKnown RBP20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms