RNA–Protein interactions for RNA: ENST00000455496.1

NIPSNAP1-204, Transcript of nipsnap homolog 1, humanhuman

TSL 3

Gene NIPSNAP1, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP1-204ENST00000455496 INCENPQ9NQS7 918 aa11.5□□□□□ -0.57
NIPSNAP1-204ENST00000455496 FBXO40Q9UH90 709 aa11.5□□□□□ -0.57
NIPSNAP1-204ENST00000455496 RIPK3Q9Y572 518 aa11.5□□□□□ -0.57
NIPSNAP1-204ENST00000455496 PTPRSQ13332 1948 aa11.5□□□□□ -0.57
NIPSNAP1-204ENST00000455496 LINC01565O15544 149 aa11.49□□□□□ -0.57
NIPSNAP1-204ENST00000455496 SRGAP3O43295 1099 aa11.49□□□□□ -0.57
NIPSNAP1-204ENST00000455496 IGSF3O75054 1194 aa11.49□□□□□ -0.57
NIPSNAP1-204ENST00000455496 PTGS1P23219 599 aa11.49□□□□□ -0.57
NIPSNAP1-204ENST00000455496 ARID4AP29374 1257 aaPredicted RBP11.49□□□□□ -0.57
NIPSNAP1-204ENST00000455496 CPT1AP50416 773 aa11.49□□□□□ -0.57
NIPSNAP1-204ENST00000455496 PLCD1P51178 756 aa11.49□□□□□ -0.57
NIPSNAP1-204ENST00000455496 DYNLL1P63167 89 aaKnown RBP11.49□□□□□ -0.57
NIPSNAP1-204ENST00000455496 IRX6P78412 446 aaPredicted RBP11.49□□□□□ -0.57
NIPSNAP1-204ENST00000455496 ICA1Q05084 483 aa11.49□□□□□ -0.57
NIPSNAP1-204ENST00000455496 COASYQ13057 564 aa11.49□□□□□ -0.57
NIPSNAP1-204ENST00000455496 BRDTQ58F21 947 aaPredicted RBP11.49□□□□□ -0.57
NIPSNAP1-204ENST00000455496 CEP85Q6P2H3 762 aa11.49□□□□□ -0.57
NIPSNAP1-204ENST00000455496 UBALD2Q8IYN6 164 aa11.49□□□□□ -0.57
NIPSNAP1-204ENST00000455496 MYOCDQ8IZQ8 938 aa11.49□□□□□ -0.57
NIPSNAP1-204ENST00000455496 RUBCNQ92622 972 aa11.49□□□□□ -0.57
NIPSNAP1-204ENST00000455496 MFSD1Q9H3U5 465 aa11.49□□□□□ -0.57
NIPSNAP1-204ENST00000455496 USP15Q9Y4E8 981 aaPredicted RBP11.49□□□□□ -0.57
NIPSNAP1-204ENST00000455496 CTDP1Q9Y5B0 961 aaPredicted RBP11.49□□□□□ -0.57
NIPSNAP1-204ENST00000455496 PNMA6EA0A0J9YXQ4 647 aa11.48□□□□□ -0.57
NIPSNAP1-204ENST00000455496 USP17L12C9JPN9 530 aa11.48□□□□□ -0.57
NIPSNAP1-204ENST00000455496 USP17L21D6R901 530 aa11.48□□□□□ -0.57
NIPSNAP1-204ENST00000455496 NBNO60934 754 aa11.48□□□□□ -0.57
NIPSNAP1-204ENST00000455496 POLR3DP05423 398 aaPredicted RBP11.48□□□□□ -0.57
NIPSNAP1-204ENST00000455496 RB1P06400 928 aa11.48□□□□□ -0.57
NIPSNAP1-204ENST00000455496 UQCRFS1P1P0C7P4 283 aa11.48□□□□□ -0.57
NIPSNAP1-204ENST00000455496 ATF7P17544 494 aaPredicted RBP11.48□□□□□ -0.57
NIPSNAP1-204ENST00000455496 GTF2F1P35269 517 aaKnown RBP eCLIP11.48□□□□□ -0.576e-7■■■■□ 26
NIPSNAP1-204ENST00000455496 GABPAQ06546 454 aa11.48□□□□□ -0.57
NIPSNAP1-204ENST00000455496 DMWDQ09019 674 aa11.48□□□□□ -0.57
NIPSNAP1-204ENST00000455496 ANGPT1Q15389 498 aa11.48□□□□□ -0.57
NIPSNAP1-204ENST00000455496 PTGISQ16647 500 aa11.48□□□□□ -0.57
NIPSNAP1-204ENST00000455496 CHST13Q8NET6 341 aa11.48□□□□□ -0.57
NIPSNAP1-204ENST00000455496 C11orf84Q9BUA3 381 aaPredicted RBP11.48□□□□□ -0.57
NIPSNAP1-204ENST00000455496 ATP2A1O14983 1001 aa11.47□□□□□ -0.57
NIPSNAP1-204ENST00000455496 ADRB1P08588 477 aa11.47□□□□□ -0.57
NIPSNAP1-204ENST00000455496 ATP8B2P98198 1209 aa11.47□□□□□ -0.57
NIPSNAP1-204ENST00000455496 CNTN2Q02246 1040 aa11.47□□□□□ -0.57
NIPSNAP1-204ENST00000455496 MTMR3Q13615 1198 aa11.47□□□□□ -0.57
NIPSNAP1-204ENST00000455496 AAMPQ13685 434 aa11.47□□□□□ -0.57
NIPSNAP1-204ENST00000455496 TCTN1Q2MV58 587 aa11.47□□□□□ -0.57
NIPSNAP1-204ENST00000455496 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.47□□□□□ -0.57
NIPSNAP1-204ENST00000455496 KIAA1211Q6ZU35 1233 aa11.47□□□□□ -0.57
NIPSNAP1-204ENST00000455496 SIAH1Q8IUQ4 282 aa11.47□□□□□ -0.57
NIPSNAP1-204ENST00000455496 CPXCR1Q8N123 301 aa11.47□□□□□ -0.57
NIPSNAP1-204ENST00000455496 EXOC6Q8TAG9 804 aa11.47□□□□□ -0.57
NIPSNAP1-204ENST00000455496 CYP2W1Q8TAV3 490 aa11.47□□□□□ -0.57
NIPSNAP1-204ENST00000455496 PDGFCQ9NRA1 345 aa11.47□□□□□ -0.57
NIPSNAP1-204ENST00000455496 PA2G4Q9UQ80 394 aaKnown RBP11.47□□□□□ -0.57
NIPSNAP1-204ENST00000455496 TANC1Q9C0D5 1861 aa11.46□□□□□ -0.57
NIPSNAP1-204ENST00000455496 C5orf67F2Z3F1 127 aa11.46□□□□□ -0.57
NIPSNAP1-204ENST00000455496 KPNA6O60684 536 aa11.46□□□□□ -0.57
NIPSNAP1-204ENST00000455496 ZBED4O75132 1171 aa11.46□□□□□ -0.57
NIPSNAP1-204ENST00000455496 HMMRO75330 724 aa11.46□□□□□ -0.57
NIPSNAP1-204ENST00000455496 CYP7A1P22680 504 aa11.46□□□□□ -0.57
NIPSNAP1-204ENST00000455496 CTNNB1P35222 781 aa11.46□□□□□ -0.57
NIPSNAP1-204ENST00000455496 ATXN1P54253 815 aaKnown RBP11.46□□□□□ -0.57
NIPSNAP1-204ENST00000455496 POLA2Q14181 598 aa11.46□□□□□ -0.57
NIPSNAP1-204ENST00000455496 DUSP28Q4G0W2 176 aa11.46□□□□□ -0.57
NIPSNAP1-204ENST00000455496 FAM83BQ5T0W9 1011 aa11.46□□□□□ -0.57
NIPSNAP1-204ENST00000455496 TAPT1Q6NXT6 567 aa11.46□□□□□ -0.57
NIPSNAP1-204ENST00000455496 RPAP2Q8IXW5 612 aaPredicted RBP11.46□□□□□ -0.57
NIPSNAP1-204ENST00000455496 EFHBQ8N7U6 833 aa11.46□□□□□ -0.57
NIPSNAP1-204ENST00000455496 FAM133AQ8N9E0 248 aa11.46□□□□□ -0.57
NIPSNAP1-204ENST00000455496 KREMEN2Q8NCW0 462 aa11.46□□□□□ -0.57
NIPSNAP1-204ENST00000455496 SSH3Q8TE77 659 aa11.46□□□□□ -0.57
NIPSNAP1-204ENST00000455496 SLF1Q9BQI6 1058 aa11.46□□□□□ -0.57
NIPSNAP1-204ENST00000455496 GOPCQ9HD26 462 aa11.46□□□□□ -0.57
NIPSNAP1-204ENST00000455496 COPRSQ9NQ92 184 aa11.46□□□□□ -0.57
NIPSNAP1-204ENST00000455496 CLEC1BQ9P126 229 aa11.46□□□□□ -0.57
NIPSNAP1-204ENST00000455496 DACH1Q9UI36 760 aa11.46□□□□□ -0.57
NIPSNAP1-204ENST00000455496 RWDD3Q9Y3V2 267 aa11.46□□□□□ -0.57
NIPSNAP1-204ENST00000455496 MCM3APO60318 1980 aa11.46□□□□□ -0.58
NIPSNAP1-204ENST00000455496 FOCADQ5VW36 1801 aa11.45□□□□□ -0.58
NIPSNAP1-204ENST00000455496 GRM6O15303 877 aa11.45□□□□□ -0.58
NIPSNAP1-204ENST00000455496 RAD21O60216 631 aa11.45□□□□□ -0.58
NIPSNAP1-204ENST00000455496 NEFLP07196 543 aa11.45□□□□□ -0.58
NIPSNAP1-204ENST00000455496 RBL2Q08999 1139 aa11.45□□□□□ -0.58
NIPSNAP1-204ENST00000455496 TFCP2Q12800 502 aa11.45□□□□□ -0.58
NIPSNAP1-204ENST00000455496 EEPD1Q7L9B9 569 aa11.45□□□□□ -0.58
NIPSNAP1-204ENST00000455496 FBXO16Q8IX29 292 aaPredicted RBP11.45□□□□□ -0.58
NIPSNAP1-204ENST00000455496 PRPF38AQ8NAV1 312 aaKnown RBP11.45□□□□□ -0.58
NIPSNAP1-204ENST00000455496 SORCS3Q9UPU3 1222 aa11.45□□□□□ -0.58
NIPSNAP1-204ENST00000455496 RAD50Q92878 1312 aa11.44□□□□□ -0.58
NIPSNAP1-204ENST00000455496 SOBPA7XYQ1 873 aa11.44□□□□□ -0.58
NIPSNAP1-204ENST00000455496 LGR5O75473 907 aa11.44□□□□□ -0.58
NIPSNAP1-204ENST00000455496 CKBP12277 381 aa11.44□□□□□ -0.58
NIPSNAP1-204ENST00000455496 BMPR1AP36894 532 aa11.44□□□□□ -0.58
NIPSNAP1-204ENST00000455496 COL9A3Q14050 684 aaPredicted RBP11.44□□□□□ -0.58
NIPSNAP1-204ENST00000455496 TMEM63BQ5T3F8 832 aa11.44□□□□□ -0.58
NIPSNAP1-204ENST00000455496 CCDC105Q8IYK2 499 aa11.44□□□□□ -0.58
NIPSNAP1-204ENST00000455496 FIBCD1Q8N539 461 aa11.44□□□□□ -0.58
NIPSNAP1-204ENST00000455496 MIGA1Q8NAN2 632 aa11.44□□□□□ -0.58
NIPSNAP1-204ENST00000455496 PPP1R13LQ8WUF5 828 aa11.44□□□□□ -0.58
NIPSNAP1-204ENST00000455496 TOP1MTQ969P6 601 aa11.44□□□□□ -0.58
NIPSNAP1-204ENST00000455496 RAVER2Q9HCJ3 691 aaKnown RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms