RNA–Protein interactions for RNA: ENST00000455362.1

HMGB1P4-201, Transcript of high mobility group box 1 pseudogene 4, humanhuman

BASIC

Gene HMGB1P4, Length 567 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P4-201ENST00000455362 FAM187AA6NFU0 413 aa6.16□□□□□ -1.42
HMGB1P4-201ENST00000455362 AKAP10O43572 662 aa6.16□□□□□ -1.42
HMGB1P4-201ENST00000455362 NRDCO43847 1150 aa6.16□□□□□ -1.42
HMGB1P4-201ENST00000455362 GSPT1P15170 499 aaKnown RBP6.16□□□□□ -1.42
HMGB1P4-201ENST00000455362 SDSP20132 328 aa6.16□□□□□ -1.42
HMGB1P4-201ENST00000455362 PDE6BP35913 854 aa6.16□□□□□ -1.42
HMGB1P4-201ENST00000455362 TIMM10P62072 90 aa6.16□□□□□ -1.42
HMGB1P4-201ENST00000455362 CLCQ05315 142 aa6.16□□□□□ -1.42
HMGB1P4-201ENST00000455362 TSHZ3Q63HK5 1081 aa6.16□□□□□ -1.42
HMGB1P4-201ENST00000455362 PRR5LQ6MZQ0 368 aa6.16□□□□□ -1.42
HMGB1P4-201ENST00000455362 PRICKLE2Q7Z3G6 844 aa6.16□□□□□ -1.42
HMGB1P4-201ENST00000455362 LRRC47Q8N1G4 583 aaKnown RBP6.16□□□□□ -1.42
HMGB1P4-201ENST00000455362 LINC00528Q8N1L1 170 aa6.16□□□□□ -1.42
HMGB1P4-201ENST00000455362 PAF1Q8N7H5 531 aa6.16□□□□□ -1.42
HMGB1P4-201ENST00000455362 C19orf47Q8N9M1 422 aaKnown RBP6.16□□□□□ -1.42
HMGB1P4-201ENST00000455362 CNBD1Q8NA66 436 aa6.16□□□□□ -1.42
HMGB1P4-201ENST00000455362 SLC39A13Q96H72 371 aa6.16□□□□□ -1.42
HMGB1P4-201ENST00000455362 NECAB3Q96P71 396 aaPredicted RBP6.16□□□□□ -1.42
HMGB1P4-201ENST00000455362 ASPSCR1Q9BZE9 553 aa6.16□□□□□ -1.42
HMGB1P4-201ENST00000455362 CCDC8Q9H0W5 538 aaPredicted RBP6.16□□□□□ -1.42
HMGB1P4-201ENST00000455362 CHST12Q9NRB3 414 aa6.16□□□□□ -1.42
HMGB1P4-201ENST00000455362 AAASQ9NRG9 546 aa6.16□□□□□ -1.42
HMGB1P4-201ENST00000455362 CNNM1Q9NRU3 951 aa6.16□□□□□ -1.42
HMGB1P4-201ENST00000455362 ECHDC1Q9NTX5 307 aa6.16□□□□□ -1.42
HMGB1P4-201ENST00000455362 DZANK1Q9NVP4 752 aa6.16□□□□□ -1.42
HMGB1P4-201ENST00000455362 DACH1Q9UI36 760 aa6.16□□□□□ -1.42
HMGB1P4-201ENST00000455362 FPGT-TNNI3KV9GXZ4 949 aa6.16□□□□□ -1.42
HMGB1P4-201ENST00000455362 TTC41PQ6P2S7 1318 aa6.16□□□□□ -1.42
HMGB1P4-201ENST00000455362 A0A1W2PNR3 127 aa6.15□□□□□ -1.42
HMGB1P4-201ENST00000455362 E2F8A0AVK6 867 aa6.15□□□□□ -1.42
HMGB1P4-201ENST00000455362 KLRG2A4D1S0 409 aaPredicted RBP6.15□□□□□ -1.42
HMGB1P4-201ENST00000455362 IQCA1LA6NCM1 817 aa6.15□□□□□ -1.42
HMGB1P4-201ENST00000455362 ENC1O14682 589 aa6.15□□□□□ -1.42
HMGB1P4-201ENST00000455362 KHNYNO15037 678 aaKnown RBP6.15□□□□□ -1.42
HMGB1P4-201ENST00000455362 MMP10P09238 476 aa6.15□□□□□ -1.42
HMGB1P4-201ENST00000455362 ATP4AP20648 1035 aa6.15□□□□□ -1.42
HMGB1P4-201ENST00000455362 MSX1P28360 303 aa6.15□□□□□ -1.42
HMGB1P4-201ENST00000455362 IGHMBP2P38935 993 aaKnown RBP6.15□□□□□ -1.42
HMGB1P4-201ENST00000455362 RPS8P62241 208 aaKnown RBP6.15□□□□□ -1.42
HMGB1P4-201ENST00000455362 POU5F1BQ06416 359 aa6.15□□□□□ -1.42
HMGB1P4-201ENST00000455362 TYRO3Q06418 890 aa6.15□□□□□ -1.42
HMGB1P4-201ENST00000455362 ITKQ08881 620 aa6.15□□□□□ -1.42
HMGB1P4-201ENST00000455362 CBX2Q14781 532 aaPredicted RBP6.15□□□□□ -1.42
HMGB1P4-201ENST00000455362 METTL24Q5JXM2 366 aa6.15□□□□□ -1.42
HMGB1P4-201ENST00000455362 HGSNATQ68CP4 663 aa6.15□□□□□ -1.42
HMGB1P4-201ENST00000455362 CNNM4Q6P4Q7 775 aa6.15□□□□□ -1.42
HMGB1P4-201ENST00000455362 Q6ZNB5 142 aa6.15□□□□□ -1.42
HMGB1P4-201ENST00000455362 DDX46Q7L014 1031 aaKnown RBP6.15□□□□□ -1.42
HMGB1P4-201ENST00000455362 REC114Q7Z4M0 266 aa6.15□□□□□ -1.42
HMGB1P4-201ENST00000455362 TMTC2Q8N394 836 aa6.15□□□□□ -1.42
HMGB1P4-201ENST00000455362 AFAP1L2Q8N4X5 818 aa6.15□□□□□ -1.42
HMGB1P4-201ENST00000455362 VGLL2Q8N8G2 317 aa6.15□□□□□ -1.42
HMGB1P4-201ENST00000455362 PI4K2BQ8TCG2 481 aa6.15□□□□□ -1.42
HMGB1P4-201ENST00000455362 MTMR8Q96EF0 704 aa6.15□□□□□ -1.42
HMGB1P4-201ENST00000455362 NEUROD6Q96NK8 337 aa6.15□□□□□ -1.42
HMGB1P4-201ENST00000455362 CDC5LQ99459 802 aaKnown RBP6.15□□□□□ -1.42
HMGB1P4-201ENST00000455362 MPHOSPH8Q99549 860 aa6.15□□□□□ -1.42
HMGB1P4-201ENST00000455362 KIF2CQ99661 725 aa6.15□□□□□ -1.42
HMGB1P4-201ENST00000455362 PLCD4Q9BRC7 762 aa6.15□□□□□ -1.42
HMGB1P4-201ENST00000455362 RUSC1Q9BVN2 902 aa6.15□□□□□ -1.42
HMGB1P4-201ENST00000455362 BRD7Q9NPI1 651 aa6.15□□□□□ -1.42
HMGB1P4-201ENST00000455362 AVENQ9NQS1 362 aaPredicted RBP6.15□□□□□ -1.42
HMGB1P4-201ENST00000455362 AASDHPPTQ9NRN7 309 aa6.15□□□□□ -1.42
HMGB1P4-201ENST00000455362 TLR7Q9NYK1 1049 aaKnown RBP6.15□□□□□ -1.42
HMGB1P4-201ENST00000455362 GPN3Q9UHW5 284 aaPredicted RBP6.15□□□□□ -1.42
HMGB1P4-201ENST00000455362 DBNLQ9UJU6 430 aaKnown RBP6.15□□□□□ -1.42
HMGB1P4-201ENST00000455362 SAMM50Q9Y512 469 aa6.15□□□□□ -1.42
HMGB1P4-201ENST00000455362 PCDHB5Q9Y5E4 795 aa6.15□□□□□ -1.42
HMGB1P4-201ENST00000455362 MROH5Q6ZUA9 1318 aa6.15□□□□□ -1.43
HMGB1P4-201ENST00000455362 SPEF2Q9C093 1822 aa6.15□□□□□ -1.43
HMGB1P4-201ENST00000455362 RIC1Q4ADV7 1423 aa6.15□□□□□ -1.43
HMGB1P4-201ENST00000455362 AK9Q5TCS8 1911 aa6.15□□□□□ -1.43
HMGB1P4-201ENST00000455362 A0A1W2PQH9 124 aa6.14□□□□□ -1.43
HMGB1P4-201ENST00000455362 FAM221AA4D161 298 aa6.14□□□□□ -1.43
HMGB1P4-201ENST00000455362 GSG1L2A8MUP6 293 aa6.14□□□□□ -1.43
HMGB1P4-201ENST00000455362 ERC2O15083 957 aa6.14□□□□□ -1.43
HMGB1P4-201ENST00000455362 ST8SIA5O15466 376 aa6.14□□□□□ -1.43
HMGB1P4-201ENST00000455362 GLRX3O76003 335 aaKnown RBP6.14□□□□□ -1.43
HMGB1P4-201ENST00000455362 PDE8BO95263 885 aa6.14□□□□□ -1.43
HMGB1P4-201ENST00000455362 CYP2E1P05181 493 aaPredicted RBP6.14□□□□□ -1.43
HMGB1P4-201ENST00000455362 BMP2P12643 396 aa6.14□□□□□ -1.43
HMGB1P4-201ENST00000455362 ATP5JP18859 108 aa6.14□□□□□ -1.43
HMGB1P4-201ENST00000455362 HOXA10P31260 410 aaPredicted RBP6.14□□□□□ -1.43
HMGB1P4-201ENST00000455362 CTSOP43234 321 aaPredicted RBP6.14□□□□□ -1.43
HMGB1P4-201ENST00000455362 ST5P78524 1137 aa6.14□□□□□ -1.43
HMGB1P4-201ENST00000455362 PIN1Q13526 163 aaPredicted RBP6.14□□□□□ -1.43
HMGB1P4-201ENST00000455362 MLC1Q15049 377 aa6.14□□□□□ -1.43
HMGB1P4-201ENST00000455362 ATP2B3Q16720 1220 aa6.14□□□□□ -1.43
HMGB1P4-201ENST00000455362 CRY2Q49AN0 593 aa6.14□□□□□ -1.43
HMGB1P4-201ENST00000455362 C10orf62Q5T681 223 aaPredicted RBP6.14□□□□□ -1.43
HMGB1P4-201ENST00000455362 MSL1Q68DK7 614 aa6.14□□□□□ -1.43
HMGB1P4-201ENST00000455362 MRM1Q6IN84 353 aaKnown RBP6.14□□□□□ -1.43
HMGB1P4-201ENST00000455362 RUFY4Q6ZNE9 571 aa6.14□□□□□ -1.43
HMGB1P4-201ENST00000455362 NECAB2Q7Z6G3 386 aa6.14□□□□□ -1.43
HMGB1P4-201ENST00000455362 TTC6Q86TZ1 520 aa6.14□□□□□ -1.43
HMGB1P4-201ENST00000455362 ZBTB46Q86UZ6 589 aa6.14□□□□□ -1.43
HMGB1P4-201ENST00000455362 PASD1Q8IV76 773 aa6.14□□□□□ -1.43
HMGB1P4-201ENST00000455362 ANKRD18AQ8IVF6 992 aa6.14□□□□□ -1.43
HMGB1P4-201ENST00000455362 SVIPQ8NHG7 77 aa6.14□□□□□ -1.43
HMGB1P4-201ENST00000455362 CELF1Q92879 486 aaKnown RBP6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms