RNA–Protein interactions for RNA: ENST00000455228.1

LINC01940-201, Transcript of long intergenic non-protein coding RNA 1940, humanhuman

TSL 2 BASIC

Gene LINC01940, Length 3,489 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01940-201ENST00000455228 CDC23Q9UJX2 597 aa10.66□□□□□ -0.7
LINC01940-201ENST00000455228 CLASP2O75122 1294 aaKnown RBP10.66□□□□□ -0.7
LINC01940-201ENST00000455228 AFMP43652 599 aa10.66□□□□□ -0.7
LINC01940-201ENST00000455228 APLP1P51693 650 aa10.66□□□□□ -0.7
LINC01940-201ENST00000455228 TRIML1Q8N9V2 468 aa10.66□□□□□ -0.7
LINC01940-201ENST00000455228 PANX2Q96RD6 677 aa10.66□□□□□ -0.7
LINC01940-201ENST00000455228 GINM1Q9NU53 330 aa10.66□□□□□ -0.7
LINC01940-201ENST00000455228 CEP131Q9UPN4 1083 aa10.66□□□□□ -0.7
LINC01940-201ENST00000455228 BICDL2A1A5D9 508 aa10.65□□□□□ -0.7
LINC01940-201ENST00000455228 LUC7L3O95232 432 aaKnown RBP10.65□□□□□ -0.7
LINC01940-201ENST00000455228 PLCD1P51178 756 aa10.65□□□□□ -0.7
LINC01940-201ENST00000455228 GRIN1Q05586 938 aa10.65□□□□□ -0.7
LINC01940-201ENST00000455228 RBL2Q08999 1139 aa10.65□□□□□ -0.7
LINC01940-201ENST00000455228 COL19A1Q14993 1142 aa10.65□□□□□ -0.7
LINC01940-201ENST00000455228 PPP1R15BQ5SWA1 713 aa10.65□□□□□ -0.7
LINC01940-201ENST00000455228 NCCRP1Q6ZVX7 275 aaPredicted RBP10.65□□□□□ -0.7
LINC01940-201ENST00000455228 ZNF570Q96NI8 536 aa10.65□□□□□ -0.7
LINC01940-201ENST00000455228 NUP58Q9BVL2 599 aa10.65□□□□□ -0.7
LINC01940-201ENST00000455228 NAA15Q9BXJ9 866 aaKnown RBP10.65□□□□□ -0.7
LINC01940-201ENST00000455228 TEX33O43247 280 aa10.65□□□□□ -0.7
LINC01940-201ENST00000455228 RANBP6O60518 1105 aaKnown RBP10.65□□□□□ -0.7
LINC01940-201ENST00000455228 MTRF1O75570 445 aaKnown RBP10.65□□□□□ -0.7
LINC01940-201ENST00000455228 PDGFRBP09619 1106 aa10.65□□□□□ -0.7
LINC01940-201ENST00000455228 ALDH3A1P30838 453 aa10.65□□□□□ -0.7
LINC01940-201ENST00000455228 MDM2Q00987 491 aaPredicted RBP10.65□□□□□ -0.7
LINC01940-201ENST00000455228 MORC3Q14149 939 aa10.65□□□□□ -0.7
LINC01940-201ENST00000455228 NR1I3Q14994 352 aa10.65□□□□□ -0.7
LINC01940-201ENST00000455228 TTF1Q15361 905 aaPredicted RBP10.65□□□□□ -0.7
LINC01940-201ENST00000455228 CHRNA2Q15822 529 aa10.65□□□□□ -0.7
LINC01940-201ENST00000455228 PARP10Q53GL7 1025 aa10.65□□□□□ -0.7
LINC01940-201ENST00000455228 LDHAL6AQ6ZMR3 332 aa10.65□□□□□ -0.7
LINC01940-201ENST00000455228 C3orf62Q6ZUJ4 267 aa10.65□□□□□ -0.7
LINC01940-201ENST00000455228 P3H4Q92791 437 aa10.65□□□□□ -0.7
LINC01940-201ENST00000455228 FAM89AQ96GI7 184 aa10.65□□□□□ -0.7
LINC01940-201ENST00000455228 CGREF1Q99674 301 aa10.65□□□□□ -0.7
LINC01940-201ENST00000455228 NAPBQ9H115 298 aa10.65□□□□□ -0.7
LINC01940-201ENST00000455228 CNNM1Q9NRU3 951 aa10.65□□□□□ -0.7
LINC01940-201ENST00000455228 ADGRG1Q9Y653 693 aa10.65□□□□□ -0.7
LINC01940-201ENST00000455228 CTAGE15A4D2H0 777 aa10.64□□□□□ -0.71
LINC01940-201ENST00000455228 PHACTR2O75167 634 aa10.64□□□□□ -0.71
LINC01940-201ENST00000455228 DNAJC8O75937 253 aaPredicted RBP10.64□□□□□ -0.71
LINC01940-201ENST00000455228 CTAGE8P0CG41 777 aa10.64□□□□□ -0.71
LINC01940-201ENST00000455228 PTPREP23469 700 aa10.64□□□□□ -0.71
LINC01940-201ENST00000455228 ERCC5P28715 1186 aaPredicted RBP10.64□□□□□ -0.71
LINC01940-201ENST00000455228 NEK2P51955 445 aa10.64□□□□□ -0.71
LINC01940-201ENST00000455228 CASP8Q14790 479 aa10.64□□□□□ -0.71
LINC01940-201ENST00000455228 CTAGE6Q86UF2 777 aa10.64□□□□□ -0.71
LINC01940-201ENST00000455228 CTAGE4Q8IX94 777 aa10.64□□□□□ -0.71
LINC01940-201ENST00000455228 MTRQ99707 1265 aa10.64□□□□□ -0.71
LINC01940-201ENST00000455228 ZFATQ9P243 1243 aa10.64□□□□□ -0.71
LINC01940-201ENST00000455228 TIMM22Q9Y584 194 aa10.64□□□□□ -0.71
LINC01940-201ENST00000455228 SIPA1L3O60292 1781 aaPredicted RBP10.64□□□□□ -0.71
LINC01940-201ENST00000455228 CCDC162PA2VCL2 907 aa10.64□□□□□ -0.71
LINC01940-201ENST00000455228 BIRC5O15392 142 aa10.64□□□□□ -0.71
LINC01940-201ENST00000455228 TBC1D12O60347 775 aa10.64□□□□□ -0.71
LINC01940-201ENST00000455228 EPB41P11171 864 aaKnown RBP10.64□□□□□ -0.71
LINC01940-201ENST00000455228 ADD2P35612 726 aa10.64□□□□□ -0.71
LINC01940-201ENST00000455228 KIF5AQ12840 1032 aa10.64□□□□□ -0.71
LINC01940-201ENST00000455228 TRAPPC9Q96Q05 1148 aa10.64□□□□□ -0.71
LINC01940-201ENST00000455228 CTAGE1Q96RT6 745 aa10.64□□□□□ -0.71
LINC01940-201ENST00000455228 GBP3Q9H0R5 595 aa10.64□□□□□ -0.71
LINC01940-201ENST00000455228 MYO1AQ9UBC5 1043 aa10.64□□□□□ -0.71
LINC01940-201ENST00000455228 A0A1B0GTH6 734 aa10.64□□□□□ -0.71
LINC01940-201ENST00000455228 MARCH6O60337 910 aa10.64□□□□□ -0.71
LINC01940-201ENST00000455228 RNF40O75150 1001 aa10.64□□□□□ -0.71
LINC01940-201ENST00000455228 MMP1P03956 469 aa10.64□□□□□ -0.71
LINC01940-201ENST00000455228 RPL17P18621 184 aaKnown RBP10.64□□□□□ -0.71
LINC01940-201ENST00000455228 MCAMP43121 646 aa10.64□□□□□ -0.71
LINC01940-201ENST00000455228 AKAP17AQ02040 695 aaKnown RBP10.64□□□□□ -0.71
LINC01940-201ENST00000455228 EIF2B5Q13144 721 aaKnown RBP10.64□□□□□ -0.71
LINC01940-201ENST00000455228 CAMK2BQ13554 666 aa10.64□□□□□ -0.71
LINC01940-201ENST00000455228 BYSLQ13895 437 aaKnown RBP10.64□□□□□ -0.71
LINC01940-201ENST00000455228 CNGA3Q16281 694 aa10.64□□□□□ -0.71
LINC01940-201ENST00000455228 NTRK3Q16288 839 aa10.64□□□□□ -0.71
LINC01940-201ENST00000455228 RAD9BQ6WBX8 426 aa10.64□□□□□ -0.71
LINC01940-201ENST00000455228 EXOC3L1Q86VI1 746 aa10.64□□□□□ -0.71
LINC01940-201ENST00000455228 CNGA4Q8IV77 575 aa10.64□□□□□ -0.71
LINC01940-201ENST00000455228 IGDCC4Q8TDY8 1250 aa10.64□□□□□ -0.71
LINC01940-201ENST00000455228 SMC6Q96SB8 1091 aa10.64□□□□□ -0.71
LINC01940-201ENST00000455228 LY9Q9HBG7 655 aa10.64□□□□□ -0.71
LINC01940-201ENST00000455228 FBXO2Q9UK22 296 aaPredicted RBP10.64□□□□□ -0.71
LINC01940-201ENST00000455228 PCDHB6Q9Y5E3 794 aa10.64□□□□□ -0.71
LINC01940-201ENST00000455228 ZNF532Q9HCE3 1301 aa10.63□□□□□ -0.71
LINC01940-201ENST00000455228 A0A1B0GVG6 124 aa10.63□□□□□ -0.71
LINC01940-201ENST00000455228 TMEM110-MUSTN1A8MSY1 372 aa10.63□□□□□ -0.71
LINC01940-201ENST00000455228 TTI1O43156 1089 aa10.63□□□□□ -0.71
LINC01940-201ENST00000455228 GBP2P32456 591 aaPredicted RBP10.63□□□□□ -0.71
LINC01940-201ENST00000455228 RTN1Q16799 776 aa10.63□□□□□ -0.71
LINC01940-201ENST00000455228 ABCB6Q9NP58 842 aa10.63□□□□□ -0.71
LINC01940-201ENST00000455228 CABP5Q9NP86 173 aa10.63□□□□□ -0.71
LINC01940-201ENST00000455228 ATP6V0A2Q9Y487 856 aa10.63□□□□□ -0.71
LINC01940-201ENST00000455228 SLIT3O75094 1523 aa10.63□□□□□ -0.71
LINC01940-201ENST00000455228 PDHBP11177 359 aa10.63□□□□□ -0.71
LINC01940-201ENST00000455228 CASP14P31944 242 aa10.63□□□□□ -0.71
LINC01940-201ENST00000455228 GUCY1A2P33402 732 aa10.63□□□□□ -0.71
LINC01940-201ENST00000455228 PIP4K2BP78356 416 aa10.63□□□□□ -0.71
LINC01940-201ENST00000455228 NR5A1Q13285 461 aa10.63□□□□□ -0.71
LINC01940-201ENST00000455228 SPATA1Q5VX52 437 aa10.63□□□□□ -0.71
LINC01940-201ENST00000455228 ANKRD13AQ8IZ07 590 aa10.63□□□□□ -0.71
LINC01940-201ENST00000455228 CMTR1Q8N1G2 835 aaKnown RBP10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms