RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 CCDC62Q6P9F0 684 aa18.8■□□□□ 0.6
GPC1-206ENST00000455111 RGS22Q8NE09 1264 aa18.8■□□□□ 0.6
GPC1-206ENST00000455111 OR6J1Q8NGC5 347 aa18.8■□□□□ 0.6
GPC1-206ENST00000455111 SYTL5Q8TDW5 730 aaPredicted RBP18.8■□□□□ 0.6
GPC1-206ENST00000455111 CTAGE1Q96RT6 745 aa18.8■□□□□ 0.6
GPC1-206ENST00000455111 ZNF576Q9H609 170 aa18.8■□□□□ 0.6
GPC1-206ENST00000455111 YBX2Q9Y2T7 364 aaKnown RBP18.8■□□□□ 0.6
GPC1-206ENST00000455111 MYH7BA7E2Y1 1941 aa18.8■□□□□ 0.6
GPC1-206ENST00000455111 A6NJR5 290 aa18.79■□□□□ 0.6
GPC1-206ENST00000455111 MYL3P08590 195 aa18.79■□□□□ 0.6
GPC1-206ENST00000455111 FOSL2P15408 326 aa18.79■□□□□ 0.6
GPC1-206ENST00000455111 PTH1RQ03431 593 aa18.79■□□□□ 0.6
GPC1-206ENST00000455111 DNERQ8NFT8 737 aa18.79■□□□□ 0.6
GPC1-206ENST00000455111 TIFAQ96CG3 184 aa18.79■□□□□ 0.6
GPC1-206ENST00000455111 SUPT16HQ9Y5B9 1047 aaKnown RBP18.79■□□□□ 0.6
GPC1-206ENST00000455111 TET1Q8NFU7 2136 aa18.79■□□□□ 0.6
GPC1-206ENST00000455111 PDE4DQ08499 809 aa18.78■□□□□ 0.6
GPC1-206ENST00000455111 COL9A3Q14050 684 aaPredicted RBP18.78■□□□□ 0.6
GPC1-206ENST00000455111 NBPF20Q3BBV1 942 aa18.78■□□□□ 0.6
GPC1-206ENST00000455111 PSRC1Q6PGN9 363 aaPredicted RBP18.78■□□□□ 0.6
GPC1-206ENST00000455111 MTMR8Q96EF0 704 aa18.78■□□□□ 0.6
GPC1-206ENST00000455111 KAT14Q9H8E8 782 aa18.78■□□□□ 0.6
GPC1-206ENST00000455111 PRDM6Q9NQX0 595 aa18.78■□□□□ 0.6
GPC1-206ENST00000455111 TRIP12Q14669 1992 aaPredicted RBP18.78■□□□□ 0.6
GPC1-206ENST00000455111 ZEB2O60315 1214 aa18.77■□□□□ 0.6
GPC1-206ENST00000455111 CYP21A2P08686 494 aa18.77■□□□□ 0.6
GPC1-206ENST00000455111 IRX6P78412 446 aaPredicted RBP18.77■□□□□ 0.6
GPC1-206ENST00000455111 ARHGAP1Q07960 439 aa18.77■□□□□ 0.6
GPC1-206ENST00000455111 ADGRE1Q14246 886 aa18.77■□□□□ 0.6
GPC1-206ENST00000455111 IMMTQ16891 758 aaKnown RBP18.77■□□□□ 0.6
GPC1-206ENST00000455111 STOX1Q6ZVD7 989 aa18.77■□□□□ 0.6
GPC1-206ENST00000455111 OTOP2Q7RTS6 562 aa18.77■□□□□ 0.6
GPC1-206ENST00000455111 IQCA1Q86XH1 822 aa18.77■□□□□ 0.6
GPC1-206ENST00000455111 VAT1LQ9HCJ6 419 aa18.77■□□□□ 0.6
GPC1-206ENST00000455111 MAD2L2Q9UI95 211 aa18.77■□□□□ 0.6
GPC1-206ENST00000455111 ABCB11O95342 1321 aa18.76■□□□□ 0.59
GPC1-206ENST00000455111 HIP1O00291 1037 aa18.76■□□□□ 0.59
GPC1-206ENST00000455111 FGBP02675 491 aa18.76■□□□□ 0.59
GPC1-206ENST00000455111 TXNP10599 105 aaKnown RBP18.76■□□□□ 0.59
GPC1-206ENST00000455111 MYOGP15173 224 aa18.76■□□□□ 0.59
GPC1-206ENST00000455111 GHRHRQ02643 423 aa18.76■□□□□ 0.59
GPC1-206ENST00000455111 GPNMBQ14956 572 aa18.76■□□□□ 0.59
GPC1-206ENST00000455111 PPP2R5BQ15173 497 aa18.76■□□□□ 0.59
GPC1-206ENST00000455111 LY6KQ17RY6 165 aa18.76■□□□□ 0.59
GPC1-206ENST00000455111 ASPRV1Q53RT3 343 aa18.76■□□□□ 0.59
GPC1-206ENST00000455111 SCFD2Q8WU76 684 aa18.76■□□□□ 0.59
GPC1-206ENST00000455111 KAT2BQ92831 832 aa18.76■□□□□ 0.59
GPC1-206ENST00000455111 MTG1Q9BT17 334 aaPredicted RBP18.76■□□□□ 0.59
GPC1-206ENST00000455111 POLR3EQ9NVU0 708 aa18.76■□□□□ 0.59
GPC1-206ENST00000455111 DOCK5Q9H7D0 1870 aa18.75■□□□□ 0.59
GPC1-206ENST00000455111 PALM3A6NDB9 673 aaPredicted RBP18.75■□□□□ 0.59
GPC1-206ENST00000455111 RGS20O76081 388 aa18.75■□□□□ 0.59
GPC1-206ENST00000455111 CHMLP26374 656 aa18.75■□□□□ 0.59
GPC1-206ENST00000455111 CPT1AP50416 773 aa18.75■□□□□ 0.59
GPC1-206ENST00000455111 RABGGTBP53611 331 aa18.75■□□□□ 0.59
GPC1-206ENST00000455111 TTLL4Q14679 1199 aa18.75■□□□□ 0.59
GPC1-206ENST00000455111 SEZ6LQ9BYH1 1024 aa18.75■□□□□ 0.59
GPC1-206ENST00000455111 NKX2-4Q9H2Z4 354 aa18.75■□□□□ 0.59
GPC1-206ENST00000455111 PRDM12Q9H4Q4 367 aa18.75■□□□□ 0.59
GPC1-206ENST00000455111 PNMA2Q9UL42 364 aa18.75■□□□□ 0.59
GPC1-206ENST00000455111 BAZ2BQ9UIF8 2168 aaKnown RBP18.75■□□□□ 0.59
GPC1-206ENST00000455111 NKRFO15226 690 aaKnown RBP eCLIP18.74■□□□□ 0.59
GPC1-206ENST00000455111 CYTH3O43739 400 aa18.74■□□□□ 0.59
GPC1-206ENST00000455111 MMP3P08254 477 aa18.74■□□□□ 0.59
GPC1-206ENST00000455111 PARP1P09874 1014 aaKnown RBP18.74■□□□□ 0.59
GPC1-206ENST00000455111 NT5C2P49902 561 aa18.74■□□□□ 0.59
GPC1-206ENST00000455111 HSD17B4P51659 736 aa18.74■□□□□ 0.59
GPC1-206ENST00000455111 AFG1LQ8WV93 481 aa18.74■□□□□ 0.59
GPC1-206ENST00000455111 KRT23Q9C075 422 aa18.74■□□□□ 0.59
GPC1-206ENST00000455111 ARHGEF15O94989 841 aa18.73■□□□□ 0.59
GPC1-206ENST00000455111 EIF2AK2P19525 551 aaKnown RBP18.73■□□□□ 0.59
GPC1-206ENST00000455111 ANTXR2P58335 489 aa18.73■□□□□ 0.59
GPC1-206ENST00000455111 HIC1Q14526 733 aa18.73■□□□□ 0.59
GPC1-206ENST00000455111 TCTN1Q2MV58 587 aa18.73■□□□□ 0.59
GPC1-206ENST00000455111 CCDC178Q5BJE1 867 aa18.73■□□□□ 0.59
GPC1-206ENST00000455111 SEPT14Q6ZU15 432 aa18.73■□□□□ 0.59
GPC1-206ENST00000455111 FBXO11Q86XK2 927 aa18.73■□□□□ 0.59
GPC1-206ENST00000455111 IL31RAQ8NI17 732 aa18.73■□□□□ 0.59
GPC1-206ENST00000455111 DHX38Q92620 1227 aaKnown RBP18.73■□□□□ 0.59
GPC1-206ENST00000455111 CTNNA3Q9UI47 895 aa18.73■□□□□ 0.59
GPC1-206ENST00000455111 DDX41Q9UJV9 622 aaKnown RBP18.73■□□□□ 0.59
GPC1-206ENST00000455111 IFIT1BQ5T764 474 aaKnown RBP18.72■□□□□ 0.59
GPC1-206ENST00000455111 NFRKBQ6P4R8 1299 aa18.72■□□□□ 0.59
GPC1-206ENST00000455111 CHST3Q7LGC8 479 aa18.72■□□□□ 0.59
GPC1-206ENST00000455111 GPKOWQ92917 476 aaPredicted RBP eCLIP18.72■□□□□ 0.59
GPC1-206ENST00000455111 ZFP91Q96JP5 570 aaPredicted RBP18.72■□□□□ 0.59
GPC1-206ENST00000455111 RMDN3Q96TC7 470 aa18.72■□□□□ 0.59
GPC1-206ENST00000455111 PXMP2Q9NR77 195 aa18.72■□□□□ 0.59
GPC1-206ENST00000455111 CUL9Q8IWT3 2517 aa18.72■□□□□ 0.59
GPC1-206ENST00000455111 RAD50Q92878 1312 aa18.72■□□□□ 0.59
GPC1-206ENST00000455111 KLRF2D3W0D1 207 aa18.71■□□□□ 0.59
GPC1-206ENST00000455111 IQCF3P0C7M6 154 aa18.71■□□□□ 0.59
GPC1-206ENST00000455111 GRM4Q14833 912 aa18.71■□□□□ 0.59
GPC1-206ENST00000455111 GDF6Q6KF10 455 aaPredicted RBP18.71■□□□□ 0.59
GPC1-206ENST00000455111 DEFB128Q7Z7B8 93 aa18.71■□□□□ 0.59
GPC1-206ENST00000455111 NSUN6Q8TEA1 469 aaKnown RBP18.71■□□□□ 0.59
GPC1-206ENST00000455111 MAF1Q9H063 256 aa18.71■□□□□ 0.59
GPC1-206ENST00000455111 BCAS3Q9H6U6 928 aa18.71■□□□□ 0.59
GPC1-206ENST00000455111 CNNM2Q9H8M5 875 aa18.71■□□□□ 0.59
GPC1-206ENST00000455111 GPHNQ9NQX3 736 aaPredicted RBP18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms