RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 DCAF4Q8WV16 495 aa7.07□□□□□ -1.28
HLA-DPA3-207ENST00000454398 DHX38Q92620 1227 aaKnown RBP7.07□□□□□ -1.28
HLA-DPA3-207ENST00000454398 WNT8BQ93098 351 aa7.07□□□□□ -1.28
HLA-DPA3-207ENST00000454398 OSBPL7Q9BZF2 842 aa7.07□□□□□ -1.28
HLA-DPA3-207ENST00000454398 FTOQ9C0B1 505 aaKnown RBP eCLIP7.07□□□□□ -1.28
HLA-DPA3-207ENST00000454398 CD320Q9NPF0 282 aa7.07□□□□□ -1.28
HLA-DPA3-207ENST00000454398 C11orf16Q9NQ32 467 aa7.07□□□□□ -1.28
HLA-DPA3-207ENST00000454398 COL20A1Q9P218 1284 aa7.07□□□□□ -1.28
HLA-DPA3-207ENST00000454398 SYNPO2Q9UMS6 1093 aa7.07□□□□□ -1.28
HLA-DPA3-207ENST00000454398 PCDHA11Q9Y5I1 949 aa7.07□□□□□ -1.28
HLA-DPA3-207ENST00000454398 MTCH2Q9Y6C9 303 aa7.07□□□□□ -1.28
HLA-DPA3-207ENST00000454398 ATG2AQ2TAZ0 1938 aa7.07□□□□□ -1.28
HLA-DPA3-207ENST00000454398 KIAA1217Q5T5P2 1943 aa7.07□□□□□ -1.28
HLA-DPA3-207ENST00000454398 DOCK5Q9H7D0 1870 aa7.07□□□□□ -1.28
HLA-DPA3-207ENST00000454398 TTC41PQ6P2S7 1318 aa7.06□□□□□ -1.28
HLA-DPA3-207ENST00000454398 ERC2O15083 957 aa7.06□□□□□ -1.28
HLA-DPA3-207ENST00000454398 ZEB2O60315 1214 aa7.06□□□□□ -1.28
HLA-DPA3-207ENST00000454398 BMP1P13497 986 aa7.06□□□□□ -1.28
HLA-DPA3-207ENST00000454398 CPT1AP50416 773 aa7.06□□□□□ -1.28
HLA-DPA3-207ENST00000454398 NMIQ13287 307 aaPredicted RBP7.06□□□□□ -1.28
HLA-DPA3-207ENST00000454398 GRB10Q13322 594 aa7.06□□□□□ -1.28
HLA-DPA3-207ENST00000454398 HIC1Q14526 733 aa7.06□□□□□ -1.28
HLA-DPA3-207ENST00000454398 GDF6Q6KF10 455 aaPredicted RBP7.06□□□□□ -1.28
HLA-DPA3-207ENST00000454398 RNF207Q6ZRF8 634 aa7.06□□□□□ -1.28
HLA-DPA3-207ENST00000454398 SEPT14Q6ZU15 432 aa7.06□□□□□ -1.28
HLA-DPA3-207ENST00000454398 HERC6Q8IVU3 1022 aa7.06□□□□□ -1.28
HLA-DPA3-207ENST00000454398 AFG1LQ8WV93 481 aa7.06□□□□□ -1.28
HLA-DPA3-207ENST00000454398 TBC1D5Q92609 795 aa7.06□□□□□ -1.28
HLA-DPA3-207ENST00000454398 ZFP91Q96JP5 570 aaPredicted RBP7.06□□□□□ -1.28
HLA-DPA3-207ENST00000454398 MTG1Q9BT17 334 aaPredicted RBP7.06□□□□□ -1.28
HLA-DPA3-207ENST00000454398 EPHX3Q9H6B9 360 aa7.06□□□□□ -1.28
HLA-DPA3-207ENST00000454398 NOD1Q9Y239 953 aa7.06□□□□□ -1.28
HLA-DPA3-207ENST00000454398 MICAL3Q7RTP6 2002 aa7.06□□□□□ -1.28
HLA-DPA3-207ENST00000454398 ORC4O43929 436 aa7.05□□□□□ -1.28
HLA-DPA3-207ENST00000454398 MMP3P08254 477 aa7.05□□□□□ -1.28
HLA-DPA3-207ENST00000454398 IQCF3P0C7M6 154 aa7.05□□□□□ -1.28
HLA-DPA3-207ENST00000454398 TXNP10599 105 aaKnown RBP7.05□□□□□ -1.28
HLA-DPA3-207ENST00000454398 TOP1P11387 765 aaKnown RBP7.05□□□□□ -1.28
HLA-DPA3-207ENST00000454398 EIF2AK2P19525 551 aaKnown RBP7.05□□□□□ -1.28
HLA-DPA3-207ENST00000454398 EDNRBP24530 442 aa7.05□□□□□ -1.28
HLA-DPA3-207ENST00000454398 PLA2G5P39877 138 aa7.05□□□□□ -1.28
HLA-DPA3-207ENST00000454398 WDR5P61964 334 aaKnown RBP7.05□□□□□ -1.28
HLA-DPA3-207ENST00000454398 ZNF200P98182 395 aaPredicted RBP7.05□□□□□ -1.28
HLA-DPA3-207ENST00000454398 ZNF543Q08ER8 600 aa7.05□□□□□ -1.28
HLA-DPA3-207ENST00000454398 CDC37Q16543 378 aaPredicted RBP7.05□□□□□ -1.28
HLA-DPA3-207ENST00000454398 PTGISQ16647 500 aa7.05□□□□□ -1.28
HLA-DPA3-207ENST00000454398 LY6KQ17RY6 165 aa7.05□□□□□ -1.28
HLA-DPA3-207ENST00000454398 SLC35G1Q2M3R5 365 aa7.05□□□□□ -1.28
HLA-DPA3-207ENST00000454398 IQSEC1Q6DN90 963 aa7.05□□□□□ -1.28
HLA-DPA3-207ENST00000454398 TRAF7Q6Q0C0 670 aa7.05□□□□□ -1.28
HLA-DPA3-207ENST00000454398 CRBNQ96SW2 442 aa7.05□□□□□ -1.28
HLA-DPA3-207ENST00000454398 UBA5Q9GZZ9 404 aa7.05□□□□□ -1.28
HLA-DPA3-207ENST00000454398 GPHNQ9NQX3 736 aaPredicted RBP7.05□□□□□ -1.28
HLA-DPA3-207ENST00000454398 POLR3EQ9NVU0 708 aa7.05□□□□□ -1.28
HLA-DPA3-207ENST00000454398 ADD3Q9UEY8 706 aaKnown RBP7.05□□□□□ -1.28
HLA-DPA3-207ENST00000454398 BAZ2BQ9UIF8 2168 aaKnown RBP7.05□□□□□ -1.28
HLA-DPA3-207ENST00000454398 TRIOO75962 3097 aa7.04□□□□□ -1.28
HLA-DPA3-207ENST00000454398 CCDC171Q6TFL3 1326 aa7.04□□□□□ -1.28
HLA-DPA3-207ENST00000454398 RAD50Q92878 1312 aa7.04□□□□□ -1.28
HLA-DPA3-207ENST00000454398 RBM47A0AV96 593 aaKnown RBP7.04□□□□□ -1.28
HLA-DPA3-207ENST00000454398 GTPBP6O43824 516 aaPredicted RBP7.04□□□□□ -1.28
HLA-DPA3-207ENST00000454398 TLL1O43897 1013 aa7.04□□□□□ -1.28
HLA-DPA3-207ENST00000454398 PLA2G6O60733 806 aa7.04□□□□□ -1.28
HLA-DPA3-207ENST00000454398 NBNO60934 754 aa7.04□□□□□ -1.28
HLA-DPA3-207ENST00000454398 FGAP02671 866 aa7.04□□□□□ -1.28
HLA-DPA3-207ENST00000454398 FGRP09769 529 aa7.04□□□□□ -1.28
HLA-DPA3-207ENST00000454398 FDX1P10109 184 aa7.04□□□□□ -1.28
HLA-DPA3-207ENST00000454398 KCNJ6P48051 423 aa7.04□□□□□ -1.28
HLA-DPA3-207ENST00000454398 ARHGAP1Q07960 439 aa7.04□□□□□ -1.28
HLA-DPA3-207ENST00000454398 MBTPS1Q14703 1052 aa7.04□□□□□ -1.28
HLA-DPA3-207ENST00000454398 LRRFIP1Q32MZ4 808 aaKnown RBP7.04□□□□□ -1.28
HLA-DPA3-207ENST00000454398 ANKRD45Q5TZF3 282 aa7.04□□□□□ -1.28
HLA-DPA3-207ENST00000454398 BTNL9Q6UXG8 535 aa7.04□□□□□ -1.28
HLA-DPA3-207ENST00000454398 LRRC8DQ7L1W4 858 aa7.04□□□□□ -1.28
HLA-DPA3-207ENST00000454398 RPUSD2Q8IZ73 545 aaKnown RBP7.04□□□□□ -1.28
HLA-DPA3-207ENST00000454398 IL31RAQ8NI17 732 aa7.04□□□□□ -1.28
HLA-DPA3-207ENST00000454398 SCFD2Q8WU76 684 aa7.04□□□□□ -1.28
HLA-DPA3-207ENST00000454398 KAT2BQ92831 832 aa7.04□□□□□ -1.28
HLA-DPA3-207ENST00000454398 FAM122AQ96E09 287 aa7.04□□□□□ -1.28
HLA-DPA3-207ENST00000454398 SLC9A7Q96T83 725 aa7.04□□□□□ -1.28
HLA-DPA3-207ENST00000454398 ALG1Q9BT22 464 aa7.04□□□□□ -1.28
HLA-DPA3-207ENST00000454398 LNPKQ9C0E8 428 aa7.04□□□□□ -1.28
HLA-DPA3-207ENST00000454398 IL25Q9H293 177 aa7.04□□□□□ -1.28
HLA-DPA3-207ENST00000454398 CHMP4BQ9H444 224 aaKnown RBP7.04□□□□□ -1.28
HLA-DPA3-207ENST00000454398 ANAPC4Q9UJX5 808 aa7.04□□□□□ -1.28
HLA-DPA3-207ENST00000454398 TELO2Q9Y4R8 837 aa7.04□□□□□ -1.28
HLA-DPA3-207ENST00000454398 WDR19Q8NEZ3 1342 aa7.03□□□□□ -1.28
HLA-DPA3-207ENST00000454398 MYH7BA7E2Y1 1941 aa7.03□□□□□ -1.28
HLA-DPA3-207ENST00000454398 NLRC5Q86WI3 1866 aa7.03□□□□□ -1.28
HLA-DPA3-207ENST00000454398 A6NJR5 290 aa7.03□□□□□ -1.28
HLA-DPA3-207ENST00000454398 PITPNM1O00562 1244 aa7.03□□□□□ -1.28
HLA-DPA3-207ENST00000454398 DHX16O60231 1041 aaKnown RBP7.03□□□□□ -1.28
HLA-DPA3-207ENST00000454398 KDM4AO75164 1064 aa7.03□□□□□ -1.28
HLA-DPA3-207ENST00000454398 PFKMP08237 780 aa7.03□□□□□ -1.28
HLA-DPA3-207ENST00000454398 CTSHP09668 335 aa7.03□□□□□ -1.28
HLA-DPA3-207ENST00000454398 SUPT20HL2P0C7V6 817 aa7.03□□□□□ -1.28
HLA-DPA3-207ENST00000454398 HSPD1P10809 573 aaKnown RBP7.03□□□□□ -1.28
HLA-DPA3-207ENST00000454398 ACTN1P12814 892 aa7.03□□□□□ -1.28
HLA-DPA3-207ENST00000454398 PDE1AP54750 535 aa7.03□□□□□ -1.28
HLA-DPA3-207ENST00000454398 MKRN4PQ13434 485 aaPredicted RBP7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms