RNA–Protein interactions for RNA: ENST00000454258.2

AC006539.3-201, humanhuman

BASIC

Gene AC006539.3, Length 129 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006539.3-201ENST00000454258 GRAMD1AQ96CP6 724 aa3.81□□□□□ -1.8
AC006539.3-201ENST00000454258 CHMP6Q96FZ7 201 aa3.81□□□□□ -1.8
AC006539.3-201ENST00000454258 BICD1Q96G01 975 aa3.81□□□□□ -1.8
AC006539.3-201ENST00000454258 DHTKD1Q96HY7 919 aaPredicted RBP3.81□□□□□ -1.8
AC006539.3-201ENST00000454258 FAXDC2Q96IV6 333 aa3.81□□□□□ -1.8
AC006539.3-201ENST00000454258 ZNF512BQ96KM6 892 aaPredicted RBP3.81□□□□□ -1.8
AC006539.3-201ENST00000454258 SCLT1Q96NL6 688 aa3.81□□□□□ -1.8
AC006539.3-201ENST00000454258 CCT8L2Q96SF2 557 aa3.81□□□□□ -1.8
AC006539.3-201ENST00000454258 MAP3K14Q99558 947 aa3.81□□□□□ -1.8
AC006539.3-201ENST00000454258 RNF26Q9BY78 433 aaPredicted RBP3.81□□□□□ -1.8
AC006539.3-201ENST00000454258 IFIH1Q9BYX4 1025 aaKnown RBP3.81□□□□□ -1.8
AC006539.3-201ENST00000454258 NACAP1Q9BZK3 213 aa3.81□□□□□ -1.8
AC006539.3-201ENST00000454258 VCX3BQ9H321 246 aa3.81□□□□□ -1.8
AC006539.3-201ENST00000454258 BOLA2Q9H3K6 86 aa3.81□□□□□ -1.8
AC006539.3-201ENST00000454258 CENPHQ9H3R5 247 aa3.81□□□□□ -1.8
AC006539.3-201ENST00000454258 TAF1DQ9H5J8 278 aaPredicted RBP3.81□□□□□ -1.8
AC006539.3-201ENST00000454258 SLITRK6Q9H5Y7 841 aa3.81□□□□□ -1.8
AC006539.3-201ENST00000454258 CCDC134Q9H6E4 229 aa3.81□□□□□ -1.8
AC006539.3-201ENST00000454258 ZSWIM4Q9H7M6 989 aa3.81□□□□□ -1.8
AC006539.3-201ENST00000454258 VCX3AQ9NNX9 186 aa3.81□□□□□ -1.8
AC006539.3-201ENST00000454258 FAM114A2Q9NRY5 505 aa3.81□□□□□ -1.8
AC006539.3-201ENST00000454258 TXLNGQ9NUQ3 528 aa3.81□□□□□ -1.8
AC006539.3-201ENST00000454258 EXOC1Q9NV70 894 aa3.81□□□□□ -1.8
AC006539.3-201ENST00000454258 INTS13Q9NVM9 706 aa3.81□□□□□ -1.8
AC006539.3-201ENST00000454258 ANKIB1Q9P2G1 1089 aa3.81□□□□□ -1.8
AC006539.3-201ENST00000454258 RASAL2Q9UJF2 1139 aa3.81□□□□□ -1.8
AC006539.3-201ENST00000454258 METRNQ9UJH8 293 aa3.81□□□□□ -1.8
AC006539.3-201ENST00000454258 GUCA1BQ9UMX6 200 aa3.81□□□□□ -1.8
AC006539.3-201ENST00000454258 MAP3K2Q9Y2U5 619 aa3.81□□□□□ -1.8
AC006539.3-201ENST00000454258 NOC2LQ9Y3T9 749 aaKnown RBP3.81□□□□□ -1.8
AC006539.3-201ENST00000454258 SLC12A7Q9Y666 1083 aa3.81□□□□□ -1.8
AC006539.3-201ENST00000454258 CLIC4Q9Y696 253 aa3.81□□□□□ -1.8
AC006539.3-201ENST00000454258 CHD4Q14839 1912 aa3.81□□□□□ -1.8
AC006539.3-201ENST00000454258 ECM29Q5VYK3 1845 aa3.81□□□□□ -1.8
AC006539.3-201ENST00000454258 ARFGEF2Q9Y6D5 1785 aa3.81□□□□□ -1.8
AC006539.3-201ENST00000454258 UBR1Q8IWV7 1749 aa3.81□□□□□ -1.8
AC006539.3-201ENST00000454258 SIPA1L2Q9P2F8 1722 aaPredicted RBP3.81□□□□□ -1.8
AC006539.3-201ENST00000454258 TMEM2Q9UHN6 1383 aa3.8□□□□□ -1.8
AC006539.3-201ENST00000454258 MYH13Q9UKX3 1938 aa3.8□□□□□ -1.8
AC006539.3-201ENST00000454258 MAST3O60307 1309 aa3.8□□□□□ -1.8
AC006539.3-201ENST00000454258 RASSF10A6NK89 507 aa3.8□□□□□ -1.8
AC006539.3-201ENST00000454258 BTBD11A6QL63 1104 aa3.8□□□□□ -1.8
AC006539.3-201ENST00000454258 GOLGA8AA7E2F4 631 aa3.8□□□□□ -1.8
AC006539.3-201ENST00000454258 BTNL10A8MVZ5 291 aa3.8□□□□□ -1.8
AC006539.3-201ENST00000454258 TMEM232C9JQI7 657 aa3.8□□□□□ -1.8
AC006539.3-201ENST00000454258 STXBP3O00186 592 aa3.8□□□□□ -1.8
AC006539.3-201ENST00000454258 SH2B2O14492 632 aaPredicted RBP3.8□□□□□ -1.8
AC006539.3-201ENST00000454258 FANCGO15287 622 aa3.8□□□□□ -1.8
AC006539.3-201ENST00000454258 POLR2DO15514 142 aaKnown RBP3.8□□□□□ -1.8
AC006539.3-201ENST00000454258 PJA2O43164 708 aa3.8□□□□□ -1.8
AC006539.3-201ENST00000454258 PRPF3O43395 683 aaKnown RBP3.8□□□□□ -1.8
AC006539.3-201ENST00000454258 SLC26A4O43511 780 aa3.8□□□□□ -1.8
AC006539.3-201ENST00000454258 ACTN4O43707 911 aaKnown RBP3.8□□□□□ -1.8
AC006539.3-201ENST00000454258 LILRB3O75022 631 aa3.8□□□□□ -1.8
AC006539.3-201ENST00000454258 N4BP1O75113 896 aaKnown RBP3.8□□□□□ -1.8
AC006539.3-201ENST00000454258 HIP1RO75146 1068 aa3.8□□□□□ -1.8
AC006539.3-201ENST00000454258 GFPT2O94808 682 aa3.8□□□□□ -1.8
AC006539.3-201ENST00000454258 SUN1O94901 812 aa3.8□□□□□ -1.8
AC006539.3-201ENST00000454258 LCA5LO95447 670 aa3.8□□□□□ -1.8
AC006539.3-201ENST00000454258 GNA14O95837 355 aa3.8□□□□□ -1.8
AC006539.3-201ENST00000454258 POLR3DP05423 398 aaPredicted RBP3.8□□□□□ -1.8
AC006539.3-201ENST00000454258 ALADP13716 330 aa3.8□□□□□ -1.8
AC006539.3-201ENST00000454258 ATP2A2P16615 1042 aaKnown RBP3.8□□□□□ -1.8
AC006539.3-201ENST00000454258 VAMP1P23763 118 aa3.8□□□□□ -1.8
AC006539.3-201ENST00000454258 YY1P25490 414 aa3.8□□□□□ -1.8
AC006539.3-201ENST00000454258 HOXC9P31274 260 aa3.8□□□□□ -1.8
AC006539.3-201ENST00000454258 CTNNA1P35221 906 aaKnown RBP3.8□□□□□ -1.8
AC006539.3-201ENST00000454258 GJA5P36382 358 aa3.8□□□□□ -1.8
AC006539.3-201ENST00000454258 LONP1P36776 959 aaKnown RBP3.8□□□□□ -1.8
AC006539.3-201ENST00000454258 SCTRP47872 440 aa3.8□□□□□ -1.8
AC006539.3-201ENST00000454258 PPP2R2AP63151 447 aa3.8□□□□□ -1.8
AC006539.3-201ENST00000454258 CCT2P78371 535 aaKnown RBP3.8□□□□□ -1.8
AC006539.3-201ENST00000454258 UBXN1Q04323 297 aa3.8□□□□□ -1.8
AC006539.3-201ENST00000454258 RNASELQ05823 741 aaKnown RBP3.8□□□□□ -1.8
AC006539.3-201ENST00000454258 CCDC15Q0P6D6 951 aa3.8□□□□□ -1.8
AC006539.3-201ENST00000454258 SFSWAPQ12872 951 aaKnown RBP3.8□□□□□ -1.8
AC006539.3-201ENST00000454258 ITGB3BPQ13352 177 aaPredicted RBP3.8□□□□□ -1.8
AC006539.3-201ENST00000454258 PDCLQ13371 301 aa3.8□□□□□ -1.8
AC006539.3-201ENST00000454258 CUL4BQ13620 913 aa3.8□□□□□ -1.8
AC006539.3-201ENST00000454258 BYSLQ13895 437 aaKnown RBP3.8□□□□□ -1.8
AC006539.3-201ENST00000454258 LBRQ14739 615 aaKnown RBP3.8□□□□□ -1.8
AC006539.3-201ENST00000454258 KRT31Q15323 416 aa3.8□□□□□ -1.8
AC006539.3-201ENST00000454258 LONRF3Q496Y0 759 aa3.8□□□□□ -1.8
AC006539.3-201ENST00000454258 ODF2Q5BJF6 829 aa3.8□□□□□ -1.8
AC006539.3-201ENST00000454258 NUGGCQ68CJ6 796 aa3.8□□□□□ -1.8
AC006539.3-201ENST00000454258 GALNT17Q6IS24 598 aa3.8□□□□□ -1.8
AC006539.3-201ENST00000454258 CNNM4Q6P4Q7 775 aa3.8□□□□□ -1.8
AC006539.3-201ENST00000454258 APOA5Q6Q788 366 aa3.8□□□□□ -1.8
AC006539.3-201ENST00000454258 C6orf89Q6UWU4 347 aa3.8□□□□□ -1.8
AC006539.3-201ENST00000454258 BTNL9Q6UXG8 535 aa3.8□□□□□ -1.8
AC006539.3-201ENST00000454258 NFXL1Q6ZNB6 911 aa3.8□□□□□ -1.8
AC006539.3-201ENST00000454258 SH3RF1Q7Z6J0 888 aa3.8□□□□□ -1.8
AC006539.3-201ENST00000454258 CPLX4Q7Z7G2 160 aa3.8□□□□□ -1.8
AC006539.3-201ENST00000454258 ARHGAP24Q8N264 748 aa3.8□□□□□ -1.8
AC006539.3-201ENST00000454258 DRAXINQ8NBI3 349 aaPredicted RBP3.8□□□□□ -1.8
AC006539.3-201ENST00000454258 NOA1Q8NC60 698 aaKnown RBP3.8□□□□□ -1.8
AC006539.3-201ENST00000454258 PRR7Q8TB68 274 aa3.8□□□□□ -1.8
AC006539.3-201ENST00000454258 PIP4K2CQ8TBX8 421 aa3.8□□□□□ -1.8
AC006539.3-201ENST00000454258 WDR66Q8TBY9 1149 aa3.8□□□□□ -1.8
AC006539.3-201ENST00000454258 NUP133Q8WUM0 1156 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms