RNA–Protein interactions for RNA: ENST00000454181.6

LYSMD2-202, Transcript of LysM domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LYSMD2, Length 1,228 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-202ENST00000454181 SNHG28P0DPA3 235 aa27.82■■■□□ 2.04
LYSMD2-202ENST00000454181 RFC2P35250 354 aa27.82■■■□□ 2.04
LYSMD2-202ENST00000454181 TMEM67Q5HYA8 995 aa27.82■■■□□ 2.04
LYSMD2-202ENST00000454181 MICALL1Q8N3F8 863 aa27.82■■■□□ 2.04
LYSMD2-202ENST00000454181 A6NJR5 290 aa27.81■■■□□ 2.04
LYSMD2-202ENST00000454181 ZNF213O14771 459 aa27.81■■■□□ 2.04
LYSMD2-202ENST00000454181 GOLGA8HP0CJ92 632 aa27.81■■■□□ 2.04
LYSMD2-202ENST00000454181 MYOGP15173 224 aa27.81■■■□□ 2.04
LYSMD2-202ENST00000454181 EDNRBP24530 442 aa27.81■■■□□ 2.04
LYSMD2-202ENST00000454181 PTPN11Q06124 597 aaPredicted RBP27.81■■■□□ 2.04
LYSMD2-202ENST00000454181 BFSP2Q13515 415 aa27.81■■■□□ 2.04
LYSMD2-202ENST00000454181 CCDC178Q5BJE1 867 aa27.81■■■□□ 2.04
LYSMD2-202ENST00000454181 IQCA1Q86XH1 822 aa27.81■■■□□ 2.04
LYSMD2-202ENST00000454181 RGS22Q8NE09 1264 aa27.81■■■□□ 2.04
LYSMD2-202ENST00000454181 ZKSCAN3Q9BRR0 538 aa27.81■■■□□ 2.04
LYSMD2-202ENST00000454181 FTOQ9C0B1 505 aaKnown RBP eCLIP27.81■■■□□ 2.04
LYSMD2-202ENST00000454181 LNPKQ9C0E8 428 aa27.81■■■□□ 2.04
LYSMD2-202ENST00000454181 LCTP09848 1927 aa27.8■■■□□ 2.04
LYSMD2-202ENST00000454181 SPTBN5Q9NRC6 3674 aaKnown RBP27.8■■■□□ 2.04
LYSMD2-202ENST00000454181 DGKHQ86XP1 1220 aa27.8■■■□□ 2.04
LYSMD2-202ENST00000454181 TBC1D10CQ8IV04 446 aa27.8■■■□□ 2.04
LYSMD2-202ENST00000454181 COPS5Q92905 334 aa27.8■■■□□ 2.04
LYSMD2-202ENST00000454181 UBA5Q9GZZ9 404 aa27.8■■■□□ 2.04
LYSMD2-202ENST00000454181 PITPNM1O00562 1244 aa27.79■■■□□ 2.04
LYSMD2-202ENST00000454181 NT5C2P49902 561 aa27.79■■■□□ 2.04
LYSMD2-202ENST00000454181 KAT14Q9H8E8 782 aa27.79■■■□□ 2.04
LYSMD2-202ENST00000454181 ADAMTS19Q8TE59 1207 aa27.78■■■□□ 2.04
LYSMD2-202ENST00000454181 PPP1R13LQ8WUF5 828 aa27.78■■■□□ 2.04
LYSMD2-202ENST00000454181 VWCEQ96DN2 955 aa27.78■■■□□ 2.04
LYSMD2-202ENST00000454181 SLC9A7Q96T83 725 aa27.78■■■□□ 2.04
LYSMD2-202ENST00000454181 ABCB11O95342 1321 aa27.77■■■□□ 2.04
LYSMD2-202ENST00000454181 KIF28PB7ZC32 967 aa27.77■■■□□ 2.04
LYSMD2-202ENST00000454181 GTPBP6O43824 516 aaPredicted RBP27.77■■■□□ 2.04
LYSMD2-202ENST00000454181 DHX16O60231 1041 aaKnown RBP27.77■■■□□ 2.04
LYSMD2-202ENST00000454181 IQCF3P0C7M6 154 aa27.77■■■□□ 2.04
LYSMD2-202ENST00000454181 SDSP20132 328 aa27.77■■■□□ 2.04
LYSMD2-202ENST00000454181 CDC37Q16543 378 aaPredicted RBP27.77■■■□□ 2.04
LYSMD2-202ENST00000454181 MCF2L2Q86YR7 1114 aa27.77■■■□□ 2.04
LYSMD2-202ENST00000454181 CCDC155Q8N6L0 562 aa27.77■■■□□ 2.04
LYSMD2-202ENST00000454181 PNMA1Q8ND90 353 aa27.77■■■□□ 2.04
LYSMD2-202ENST00000454181 PHOSPHO2Q8TCD6 241 aa27.77■■■□□ 2.04
LYSMD2-202ENST00000454181 MAF1Q9H063 256 aa27.77■■■□□ 2.04
LYSMD2-202ENST00000454181 NEDD4P46934 1319 aa27.76■■■□□ 2.03
LYSMD2-202ENST00000454181 CA3P07451 260 aa27.76■■■□□ 2.03
LYSMD2-202ENST00000454181 SKIV2LQ15477 1246 aaKnown RBP27.76■■■□□ 2.03
LYSMD2-202ENST00000454181 B4GALNT3Q6L9W6 998 aa27.76■■■□□ 2.03
LYSMD2-202ENST00000454181 SEPT14Q6ZU15 432 aa27.76■■■□□ 2.03
LYSMD2-202ENST00000454181 NSUN6Q8TEA1 469 aaKnown RBP27.76■■■□□ 2.03
LYSMD2-202ENST00000454181 CPVLQ9H3G5 476 aa27.76■■■□□ 2.03
LYSMD2-202ENST00000454181 CHD9Q3L8U1 2897 aa27.76■■■□□ 2.03
LYSMD2-202ENST00000454181 KDM4AO75164 1064 aa27.75■■■□□ 2.03
LYSMD2-202ENST00000454181 GH1P01241 217 aa27.75■■■□□ 2.03
LYSMD2-202ENST00000454181 PTGISQ16647 500 aa27.75■■■□□ 2.03
LYSMD2-202ENST00000454181 UHRF1Q96T88 793 aaPredicted RBP27.75■■■□□ 2.03
LYSMD2-202ENST00000454181 DIAPH3Q9NSV4 1193 aa27.75■■■□□ 2.03
LYSMD2-202ENST00000454181 ARIH2O95376 493 aa27.74■■■□□ 2.03
LYSMD2-202ENST00000454181 STXBP2Q15833 593 aa27.74■■■□□ 2.03
LYSMD2-202ENST00000454181 AAK1Q2M2I8 961 aa27.74■■■□□ 2.03
LYSMD2-202ENST00000454181 ASPRV1Q53RT3 343 aa27.74■■■□□ 2.03
LYSMD2-202ENST00000454181 CHST3Q7LGC8 479 aa27.74■■■□□ 2.03
LYSMD2-202ENST00000454181 ADGRF4Q8IZF3 695 aa27.74■■■□□ 2.03
LYSMD2-202ENST00000454181 AFG1LQ8WV93 481 aa27.74■■■□□ 2.03
LYSMD2-202ENST00000454181 RWDD1Q9H446 243 aaPredicted RBP27.74■■■□□ 2.03
LYSMD2-202ENST00000454181 GBF1Q92538 1859 aa27.74■■■□□ 2.03
LYSMD2-202ENST00000454181 CASTP20810 708 aaKnown RBP27.73■■■□□ 2.03
LYSMD2-202ENST00000454181 CCDC62Q6P9F0 684 aa27.73■■■□□ 2.03
LYSMD2-202ENST00000454181 CWC27Q6UX04 472 aaKnown RBP27.73■■■□□ 2.03
LYSMD2-202ENST00000454181 SYTL5Q8TDW5 730 aaPredicted RBP27.73■■■□□ 2.03
LYSMD2-202ENST00000454181 TAAR1Q96RJ0 339 aa27.73■■■□□ 2.03
LYSMD2-202ENST00000454181 IWS1Q96ST2 819 aa27.73■■■□□ 2.03
LYSMD2-202ENST00000454181 ZSCAN10Q96SZ4 725 aaPredicted RBP27.73■■■□□ 2.03
LYSMD2-202ENST00000454181 RMDN3Q96TC7 470 aa27.73■■■□□ 2.03
LYSMD2-202ENST00000454181 CERS4Q9HA82 394 aa27.73■■■□□ 2.03
LYSMD2-202ENST00000454181 VAT1LQ9HCJ6 419 aa27.73■■■□□ 2.03
LYSMD2-202ENST00000454181 MRPL11Q9Y3B7 192 aaKnown RBP27.73■■■□□ 2.03
LYSMD2-202ENST00000454181 KCNJ6P48051 423 aa27.72■■■□□ 2.03
LYSMD2-202ENST00000454181 AAMPQ13685 434 aa27.72■■■□□ 2.03
LYSMD2-202ENST00000454181 LY6KQ17RY6 165 aa27.72■■■□□ 2.03
LYSMD2-202ENST00000454181 ARHGEF16Q5VV41 709 aa27.72■■■□□ 2.03
LYSMD2-202ENST00000454181 CAGE1Q8TC20 777 aa27.72■■■□□ 2.03
LYSMD2-202ENST00000454181 TBC1D5Q92609 795 aa27.72■■■□□ 2.03
LYSMD2-202ENST00000454181 B4E1Z4 1266 aa27.71■■■□□ 2.03
LYSMD2-202ENST00000454181 HIP1O00291 1037 aa27.71■■■□□ 2.03
LYSMD2-202ENST00000454181 BAIAP3O94812 1187 aa27.71■■■□□ 2.03
LYSMD2-202ENST00000454181 MMP3P08254 477 aa27.71■■■□□ 2.03
LYSMD2-202ENST00000454181 PARP1P09874 1014 aaKnown RBP27.71■■■□□ 2.03
LYSMD2-202ENST00000454181 FBXO11Q86XK2 927 aa27.71■■■□□ 2.03
LYSMD2-202ENST00000454181 HERC6Q8IVU3 1022 aa27.71■■■□□ 2.03
LYSMD2-202ENST00000454181 ANKS1AQ92625 1134 aa27.71■■■□□ 2.03
LYSMD2-202ENST00000454181 SCN10AQ9Y5Y9 1956 aa27.71■■■□□ 2.03
LYSMD2-202ENST00000454181 RFXAPO00287 272 aa27.7■■■□□ 2.02
LYSMD2-202ENST00000454181 IMMTQ16891 758 aaKnown RBP27.7■■■□□ 2.02
LYSMD2-202ENST00000454181 CHD1LQ86WJ1 897 aa27.7■■■□□ 2.02
LYSMD2-202ENST00000454181 AFAP1L1Q8TED9 768 aa27.7■■■□□ 2.02
LYSMD2-202ENST00000454181 ARNTL2Q8WYA1 636 aa27.7■■■□□ 2.02
LYSMD2-202ENST00000454181 CTNNA3Q9UI47 895 aa27.7■■■□□ 2.02
LYSMD2-202ENST00000454181 ARHGAP1Q07960 439 aa27.69■■■□□ 2.02
LYSMD2-202ENST00000454181 DGKDQ16760 1214 aa27.69■■■□□ 2.02
LYSMD2-202ENST00000454181 QRICH1Q2TAL8 776 aa27.69■■■□□ 2.02
LYSMD2-202ENST00000454181 SMC5Q8IY18 1101 aa27.69■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms