RNA–Protein interactions for RNA: ENST00000454134.1

NCKIPSD-208, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 998 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-208ENST00000454134 NSUN6Q8TEA1 469 aaKnown RBP19.12■□□□□ 0.65
NCKIPSD-208ENST00000454134 SCFD2Q8WU76 684 aa19.12■□□□□ 0.65
NCKIPSD-208ENST00000454134 PIGSQ96S52 555 aa19.12■□□□□ 0.65
NCKIPSD-208ENST00000454134 MYL10Q9BUA6 226 aa19.12■□□□□ 0.65
NCKIPSD-208ENST00000454134 PCDHA1Q9Y5I3 950 aa19.12■□□□□ 0.65
NCKIPSD-208ENST00000454134 TLR3O15455 904 aaKnown RBP19.11■□□□□ 0.65
NCKIPSD-208ENST00000454134 PRC1O43663 620 aa19.11■□□□□ 0.65
NCKIPSD-208ENST00000454134 ARIH2O95376 493 aa19.11■□□□□ 0.65
NCKIPSD-208ENST00000454134 CD4P01730 458 aa19.11■□□□□ 0.65
NCKIPSD-208ENST00000454134 MYL3P08590 195 aa19.11■□□□□ 0.65
NCKIPSD-208ENST00000454134 TXNP10599 105 aaKnown RBP19.11■□□□□ 0.65
NCKIPSD-208ENST00000454134 EIF2AK2P19525 551 aaKnown RBP19.11■□□□□ 0.65
NCKIPSD-208ENST00000454134 CREB3L3Q68CJ9 461 aa19.11■□□□□ 0.65
NCKIPSD-208ENST00000454134 SEPT14Q6ZU15 432 aa19.11■□□□□ 0.65
NCKIPSD-208ENST00000454134 PIBF1Q8WXW3 757 aa19.11■□□□□ 0.65
NCKIPSD-208ENST00000454134 PPP1R12CQ9BZL4 782 aa19.11■□□□□ 0.65
NCKIPSD-208ENST00000454134 MAF1Q9H063 256 aa19.11■□□□□ 0.65
NCKIPSD-208ENST00000454134 RIOX1Q9H6W3 641 aa19.11■□□□□ 0.65
NCKIPSD-208ENST00000454134 LY9Q9HBG7 655 aa19.11■□□□□ 0.65
NCKIPSD-208ENST00000454134 BAZ2BQ9UIF8 2168 aaKnown RBP19.1■□□□□ 0.65
NCKIPSD-208ENST00000454134 LAMA2P24043 3122 aaKnown RBP19.1■□□□□ 0.65
NCKIPSD-208ENST00000454134 CPT1AP50416 773 aa19.1■□□□□ 0.65
NCKIPSD-208ENST00000454134 HSD17B4P51659 736 aa19.1■□□□□ 0.65
NCKIPSD-208ENST00000454134 NECTIN1Q15223 517 aa19.1■□□□□ 0.65
NCKIPSD-208ENST00000454134 ARHGEF16Q5VV41 709 aa19.1■□□□□ 0.65
NCKIPSD-208ENST00000454134 ZNF654Q8IZM8 581 aa19.1■□□□□ 0.65
NCKIPSD-208ENST00000454134 TRPV6Q9H1D0 765 aa19.1■□□□□ 0.65
NCKIPSD-208ENST00000454134 HOXA13P31271 388 aaPredicted RBP19.09■□□□□ 0.65
NCKIPSD-208ENST00000454134 PURAQ00577 322 aaKnown RBP19.09■□□□□ 0.65
NCKIPSD-208ENST00000454134 TTLL4Q14679 1199 aa19.09■□□□□ 0.65
NCKIPSD-208ENST00000454134 MFSD5Q6N075 450 aa19.09■□□□□ 0.65
NCKIPSD-208ENST00000454134 CCDC62Q6P9F0 684 aa19.09■□□□□ 0.65
NCKIPSD-208ENST00000454134 CASC1Q6TDU7 716 aa19.09■□□□□ 0.65
NCKIPSD-208ENST00000454134 PPP1R13LQ8WUF5 828 aa19.09■□□□□ 0.65
NCKIPSD-208ENST00000454134 RNPC3Q96LT9 517 aaKnown RBP19.09■□□□□ 0.65
NCKIPSD-208ENST00000454134 IWS1Q96ST2 819 aa19.09■□□□□ 0.65
NCKIPSD-208ENST00000454134 PXMP2Q9NR77 195 aa19.09■□□□□ 0.65
NCKIPSD-208ENST00000454134 POLR3EQ9NVU0 708 aa19.09■□□□□ 0.65
NCKIPSD-208ENST00000454134 NKRFO15226 690 aaKnown RBP eCLIP19.08■□□□□ 0.64
NCKIPSD-208ENST00000454134 B4GALT4O60513 344 aa19.08■□□□□ 0.64
NCKIPSD-208ENST00000454134 CYP2C18P33260 490 aa19.08■□□□□ 0.64
NCKIPSD-208ENST00000454134 MCM5P33992 734 aa19.08■□□□□ 0.64
NCKIPSD-208ENST00000454134 STXBP2Q15833 593 aa19.08■□□□□ 0.64
NCKIPSD-208ENST00000454134 LY6KQ17RY6 165 aa19.08■□□□□ 0.64
NCKIPSD-208ENST00000454134 NFXL1Q6ZNB6 911 aa19.08■□□□□ 0.64
NCKIPSD-208ENST00000454134 LRRC2Q9BYS8 371 aa19.08■□□□□ 0.64
NCKIPSD-208ENST00000454134 MTMR10Q9NXD2 777 aa19.08■□□□□ 0.64
NCKIPSD-208ENST00000454134 UMODL1Q5DID0 1318 aa19.07■□□□□ 0.64
NCKIPSD-208ENST00000454134 PNMA6FA0A0J9YX94 578 aa19.07■□□□□ 0.64
NCKIPSD-208ENST00000454134 SH2B2O14492 632 aaPredicted RBP19.07■□□□□ 0.64
NCKIPSD-208ENST00000454134 NR3C2P08235 984 aa19.07■□□□□ 0.64
NCKIPSD-208ENST00000454134 CSF2RAP15509 400 aa19.07■□□□□ 0.64
NCKIPSD-208ENST00000454134 GHRHRQ02643 423 aa19.07■□□□□ 0.64
NCKIPSD-208ENST00000454134 RAB11FIP4Q86YS3 637 aa19.07■□□□□ 0.64
NCKIPSD-208ENST00000454134 CTCFLQ8NI51 663 aaPredicted RBP19.07■□□□□ 0.64
NCKIPSD-208ENST00000454134 FAM161BQ96MY7 647 aa19.07■□□□□ 0.64
NCKIPSD-208ENST00000454134 MTG1Q9BT17 334 aaPredicted RBP19.07■□□□□ 0.64
NCKIPSD-208ENST00000454134 A6NJR5 290 aa19.06■□□□□ 0.64
NCKIPSD-208ENST00000454134 DDAH1O94760 285 aa19.06■□□□□ 0.64
NCKIPSD-208ENST00000454134 MYCLP12524 364 aaPredicted RBP19.06■□□□□ 0.64
NCKIPSD-208ENST00000454134 RXRAP19793 462 aa19.06■□□□□ 0.64
NCKIPSD-208ENST00000454134 BRDTQ58F21 947 aaPredicted RBP19.06■□□□□ 0.64
NCKIPSD-208ENST00000454134 FCHSD1Q86WN1 690 aa19.06■□□□□ 0.64
NCKIPSD-208ENST00000454134 AFG1LQ8WV93 481 aa19.06■□□□□ 0.64
NCKIPSD-208ENST00000454134 CCDC136Q96JN2 1154 aa19.06■□□□□ 0.64
NCKIPSD-208ENST00000454134 TMEM87BQ96K49 555 aa19.06■□□□□ 0.64
NCKIPSD-208ENST00000454134 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.06■□□□□ 0.649e-8■■■■■ 41.1
NCKIPSD-208ENST00000454134 ALDH8A1Q9H2A2 487 aaPredicted RBP19.06■□□□□ 0.64
NCKIPSD-208ENST00000454134 HIPK3Q9H422 1215 aa19.06■□□□□ 0.64
NCKIPSD-208ENST00000454134 CCDC69A6NI79 296 aa19.05■□□□□ 0.64
NCKIPSD-208ENST00000454134 GCOM1H8Y6P7 765 aaPredicted RBP19.05■□□□□ 0.64
NCKIPSD-208ENST00000454134 EIF3JO75822 258 aaKnown RBP19.05■□□□□ 0.64
NCKIPSD-208ENST00000454134 PLEKHA8P1O95397 391 aa19.05■□□□□ 0.64
NCKIPSD-208ENST00000454134 POLR2MP0CAP2 368 aa19.05■□□□□ 0.64
NCKIPSD-208ENST00000454134 ACRP10323 421 aa19.05■□□□□ 0.64
NCKIPSD-208ENST00000454134 CHMP4BP1P59074 171 aa19.05■□□□□ 0.64
NCKIPSD-208ENST00000454134 ARHGAP1Q07960 439 aa19.05■□□□□ 0.64
NCKIPSD-208ENST00000454134 TRAF1Q13077 416 aa19.05■□□□□ 0.64
NCKIPSD-208ENST00000454134 PPIGQ13427 754 aaKnown RBP eCLIP19.05■□□□□ 0.647e-10■■■■■ 38.3
NCKIPSD-208ENST00000454134 NBPF20Q3BBV1 942 aa19.05■□□□□ 0.64
NCKIPSD-208ENST00000454134 FAM47CQ5HY64 1035 aa19.05■□□□□ 0.64
NCKIPSD-208ENST00000454134 C16orf59Q7L2K0 433 aa19.05■□□□□ 0.64
NCKIPSD-208ENST00000454134 CMTR1Q8N1G2 835 aaKnown RBP19.05■□□□□ 0.64
NCKIPSD-208ENST00000454134 TMEM199Q8N511 208 aa19.05■□□□□ 0.64
NCKIPSD-208ENST00000454134 IL31RAQ8NI17 732 aa19.05■□□□□ 0.64
NCKIPSD-208ENST00000454134 ZFP91Q96JP5 570 aaPredicted RBP19.05■□□□□ 0.64
NCKIPSD-208ENST00000454134 MAP3K14Q99558 947 aa19.05■□□□□ 0.64
NCKIPSD-208ENST00000454134 PDCD2LQ9BRP1 358 aa19.05■□□□□ 0.64
NCKIPSD-208ENST00000454134 MTA3Q9BTC8 594 aa19.05■□□□□ 0.64
NCKIPSD-208ENST00000454134 TRMT13Q9NUP7 481 aaKnown RBP19.05■□□□□ 0.64
NCKIPSD-208ENST00000454134 KIAA1217Q5T5P2 1943 aa19.05■□□□□ 0.64
NCKIPSD-208ENST00000454134 CDC45O75419 566 aa19.04■□□□□ 0.64
NCKIPSD-208ENST00000454134 GH1P01241 217 aa19.04■□□□□ 0.64
NCKIPSD-208ENST00000454134 KIF5BP33176 963 aa19.04■□□□□ 0.64
NCKIPSD-208ENST00000454134 CCL23P55773 120 aa19.04■□□□□ 0.64
NCKIPSD-208ENST00000454134 TMTC2Q8N394 836 aa19.04■□□□□ 0.64
NCKIPSD-208ENST00000454134 NOC4LQ9BVI4 516 aaKnown RBP19.04■□□□□ 0.64
NCKIPSD-208ENST00000454134 SPZ1Q9BXG8 430 aa19.04■□□□□ 0.64
NCKIPSD-208ENST00000454134 SEZ6LQ9BYH1 1024 aa19.04■□□□□ 0.64
NCKIPSD-208ENST00000454134 MAP3K20Q9NYL2 800 aaKnown RBP19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms