RNA–Protein interactions for RNA: ENST00000453963.5

SEC16A-207, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 4,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-207ENST00000453963 LARP4BQ92615 738 aaKnown RBP13.14□□□□□ -0.31
SEC16A-207ENST00000453963 ATG3Q9NT62 314 aa13.14□□□□□ -0.31
SEC16A-207ENST00000453963 ARHGAP31Q2M1Z3 1444 aa13.14□□□□□ -0.31
SEC16A-207ENST00000453963 SETSIPP0DME0 302 aa13.14□□□□□ -0.31
SEC16A-207ENST00000453963 PHKA1P46020 1223 aa13.14□□□□□ -0.31
SEC16A-207ENST00000453963 IFNAR2P48551 515 aa13.14□□□□□ -0.31
SEC16A-207ENST00000453963 EIF3BP55884 814 aaKnown RBP13.14□□□□□ -0.31
SEC16A-207ENST00000453963 C10orf76Q5T2E6 689 aa13.14□□□□□ -0.31
SEC16A-207ENST00000453963 ICE2Q659A1 982 aa13.14□□□□□ -0.31
SEC16A-207ENST00000453963 RSAD2Q8WXG1 361 aa13.14□□□□□ -0.31
SEC16A-207ENST00000453963 KLHL29Q96CT2 875 aa13.14□□□□□ -0.31
SEC16A-207ENST00000453963 PSTPIP2Q9H939 334 aa13.14□□□□□ -0.31
SEC16A-207ENST00000453963 M0R2C6 588 aa13.14□□□□□ -0.31
SEC16A-207ENST00000453963 ADAT2Q7Z6V5 191 aaKnown RBP13.14□□□□□ -0.31
SEC16A-207ENST00000453963 CCDC125Q86Z20 511 aa13.14□□□□□ -0.31
SEC16A-207ENST00000453963 Q9H521 79 aa13.14□□□□□ -0.31
SEC16A-207ENST00000453963 ZNF804BA4D1E1 1349 aa13.13□□□□□ -0.31
SEC16A-207ENST00000453963 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.13□□□□□ -0.31
SEC16A-207ENST00000453963 DDX39AO00148 427 aaKnown RBP13.13□□□□□ -0.31
SEC16A-207ENST00000453963 GAS7O60861 476 aa13.13□□□□□ -0.31
SEC16A-207ENST00000453963 PEX19P40855 299 aa13.13□□□□□ -0.31
SEC16A-207ENST00000453963 VPS41P49754 854 aa13.13□□□□□ -0.31
SEC16A-207ENST00000453963 RBBP5Q15291 538 aaKnown RBP13.13□□□□□ -0.31
SEC16A-207ENST00000453963 GLE1Q53GS7 698 aaKnown RBP13.13□□□□□ -0.31
SEC16A-207ENST00000453963 NAA35Q5VZE5 725 aa13.13□□□□□ -0.31
SEC16A-207ENST00000453963 EEF2KMTQ96G04 330 aa13.13□□□□□ -0.31
SEC16A-207ENST00000453963 PCDHA4Q9UN74 947 aa13.13□□□□□ -0.31
SEC16A-207ENST00000453963 ARHGAP42A6NI28 874 aa13.13□□□□□ -0.31
SEC16A-207ENST00000453963 CYP2E1P05181 493 aaPredicted RBP13.13□□□□□ -0.31
SEC16A-207ENST00000453963 E2F5Q15329 346 aa13.13□□□□□ -0.31
SEC16A-207ENST00000453963 CFAP61Q8NHU2 1237 aa13.13□□□□□ -0.31
SEC16A-207ENST00000453963 ADD2P35612 726 aa13.13□□□□□ -0.31
SEC16A-207ENST00000453963 PSMD6Q15008 389 aa13.13□□□□□ -0.31
SEC16A-207ENST00000453963 CCDC144BQ3MJ40 725 aa13.13□□□□□ -0.31
SEC16A-207ENST00000453963 RASIP1Q5U651 963 aa13.13□□□□□ -0.31
SEC16A-207ENST00000453963 PPP4R1Q8TF05 950 aa13.13□□□□□ -0.31
SEC16A-207ENST00000453963 JPH2Q9BR39 696 aaPredicted RBP13.13□□□□□ -0.31
SEC16A-207ENST00000453963 PUS3Q9BZE2 481 aaKnown RBP13.13□□□□□ -0.31
SEC16A-207ENST00000453963 STK17AQ9UEE5 414 aa13.13□□□□□ -0.31
SEC16A-207ENST00000453963 DDX25Q9UHL0 483 aaKnown RBP13.13□□□□□ -0.31
SEC16A-207ENST00000453963 COBLO75128 1261 aa13.13□□□□□ -0.31
SEC16A-207ENST00000453963 ADORA1P30542 326 aa13.13□□□□□ -0.31
SEC16A-207ENST00000453963 PDE6CP51160 858 aa13.13□□□□□ -0.31
SEC16A-207ENST00000453963 DHX9Q08211 1270 aaKnown RBP13.13□□□□□ -0.31
SEC16A-207ENST00000453963 NR5A1Q13285 461 aa13.13□□□□□ -0.31
SEC16A-207ENST00000453963 TOB2Q14106 344 aaPredicted RBP13.13□□□□□ -0.31
SEC16A-207ENST00000453963 RESP18Q5W5W9 173 aa13.13□□□□□ -0.31
SEC16A-207ENST00000453963 FAM196AQ6ZSG2 479 aa13.13□□□□□ -0.31
SEC16A-207ENST00000453963 FAM178BQ8IXR5 827 aa13.13□□□□□ -0.31
SEC16A-207ENST00000453963 PAGE5Q96GU1 130 aa13.13□□□□□ -0.31
SEC16A-207ENST00000453963 PFDN4Q9NQP4 134 aa13.13□□□□□ -0.31
SEC16A-207ENST00000453963 SASH1O94885 1247 aa13.12□□□□□ -0.31
SEC16A-207ENST00000453963 RPSAP08865 295 aaKnown RBP13.12□□□□□ -0.31
SEC16A-207ENST00000453963 EIF4A3P38919 411 aaKnown RBP13.12□□□□□ -0.31
SEC16A-207ENST00000453963 YWHAEP62258 255 aaKnown RBP13.12□□□□□ -0.31
SEC16A-207ENST00000453963 LMNB2Q03252 620 aa13.12□□□□□ -0.31
SEC16A-207ENST00000453963 DOK7Q18PE1 504 aa13.12□□□□□ -0.31
SEC16A-207ENST00000453963 ANKRD35Q8N283 1001 aa13.12□□□□□ -0.31
SEC16A-207ENST00000453963 ATP8A1Q9Y2Q0 1164 aa13.12□□□□□ -0.31
SEC16A-207ENST00000453963 MOCS3O95396 460 aa13.12□□□□□ -0.31
SEC16A-207ENST00000453963 KRT31Q15323 416 aa13.12□□□□□ -0.31
SEC16A-207ENST00000453963 CASC4Q6P4E1 433 aa13.12□□□□□ -0.31
SEC16A-207ENST00000453963 ARHGEF18Q6ZSZ5 1173 aa13.12□□□□□ -0.31
SEC16A-207ENST00000453963 OSBP2Q969R2 916 aa13.12□□□□□ -0.31
SEC16A-207ENST00000453963 ANO9A1A5B4 782 aa13.12□□□□□ -0.31
SEC16A-207ENST00000453963 ZWINTO95229 277 aa13.12□□□□□ -0.31
SEC16A-207ENST00000453963 TNNI1P19237 187 aa13.12□□□□□ -0.31
SEC16A-207ENST00000453963 SCNN1DP51172 638 aa13.12□□□□□ -0.31
SEC16A-207ENST00000453963 CUL1Q13616 776 aa13.12□□□□□ -0.31
SEC16A-207ENST00000453963 TCP11X2Q5H9J9 407 aa13.12□□□□□ -0.31
SEC16A-207ENST00000453963 FMR1NBQ8N0W7 255 aaPredicted RBP13.12□□□□□ -0.31
SEC16A-207ENST00000453963 UIMC1Q96RL1 719 aa13.12□□□□□ -0.31
SEC16A-207ENST00000453963 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.12□□□□□ -0.311e-7■□□□□ 11.2
SEC16A-207ENST00000453963 PCDHA13Q9Y5I0 950 aa13.12□□□□□ -0.31
SEC16A-207ENST00000453963 ANKARQ7Z5J8 1434 aa13.11□□□□□ -0.31
SEC16A-207ENST00000453963 OPHN1O60890 802 aa13.11□□□□□ -0.31
SEC16A-207ENST00000453963 GUCY2CP25092 1073 aa13.11□□□□□ -0.31
SEC16A-207ENST00000453963 NLRX1Q86UT6 975 aa13.11□□□□□ -0.31
SEC16A-207ENST00000453963 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.11□□□□□ -0.31
SEC16A-207ENST00000453963 TACC3Q9Y6A5 838 aa13.11□□□□□ -0.31
SEC16A-207ENST00000453963 EIF3CLB5ME19 914 aaKnown RBP13.11□□□□□ -0.31
SEC16A-207ENST00000453963 BAG2O95816 211 aa13.11□□□□□ -0.31
SEC16A-207ENST00000453963 PTPN12Q05209 780 aaKnown RBP13.11□□□□□ -0.31
SEC16A-207ENST00000453963 SLMAPQ14BN4 828 aa13.11□□□□□ -0.31
SEC16A-207ENST00000453963 E2F4Q16254 413 aa13.11□□□□□ -0.31
SEC16A-207ENST00000453963 HADHQ16836 314 aaKnown RBP13.11□□□□□ -0.31
SEC16A-207ENST00000453963 HIBCHQ6NVY1 386 aaPredicted RBP13.11□□□□□ -0.31
SEC16A-207ENST00000453963 EIF3CQ99613 913 aaKnown RBP13.11□□□□□ -0.31
SEC16A-207ENST00000453963 PRPF3O43395 683 aaKnown RBP13.11□□□□□ -0.31
SEC16A-207ENST00000453963 NR2F2P24468 414 aa13.11□□□□□ -0.31
SEC16A-207ENST00000453963 CXCR5P32302 372 aa13.11□□□□□ -0.31
SEC16A-207ENST00000453963 KIF11P52732 1056 aa13.11□□□□□ -0.31
SEC16A-207ENST00000453963 PLTPP55058 493 aa13.11□□□□□ -0.31
SEC16A-207ENST00000453963 AOC3Q16853 763 aa13.11□□□□□ -0.31
SEC16A-207ENST00000453963 PRR16Q569H4 304 aa13.11□□□□□ -0.31
SEC16A-207ENST00000453963 MB21D1Q8N884 522 aa13.11□□□□□ -0.31
SEC16A-207ENST00000453963 GBP7Q8N8V2 638 aaPredicted RBP13.11□□□□□ -0.31
SEC16A-207ENST00000453963 TRIM4Q9C037 500 aa13.11□□□□□ -0.31
SEC16A-207ENST00000453963 VCX3AQ9NNX9 186 aa13.11□□□□□ -0.31
SEC16A-207ENST00000453963 LEMD3Q9Y2U8 911 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms