RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 MCF2L2Q86YR7 1114 aa17.93■□□□□ 0.46
SNX17-204ENST00000453453 JMYQ8N9B5 988 aa17.93■□□□□ 0.46
SNX17-204ENST00000453453 KCNG4Q8TDN1 519 aa17.93■□□□□ 0.46
SNX17-204ENST00000453453 AGBL1Q96MI9 1066 aa17.93■□□□□ 0.46
SNX17-204ENST00000453453 RCOR1Q9UKL0 485 aa17.93■□□□□ 0.46
SNX17-204ENST00000453453 CCL15-CCL14A0A0B4J2E2 113 aa17.92■□□□□ 0.46
SNX17-204ENST00000453453 FAM205CA6NFA0 338 aa17.92■□□□□ 0.46
SNX17-204ENST00000453453 FOSP01100 380 aaPredicted RBP17.92■□□□□ 0.46
SNX17-204ENST00000453453 STX1AQ16623 288 aa17.92■□□□□ 0.46
SNX17-204ENST00000453453 CCL15Q16663 113 aa17.92■□□□□ 0.46
SNX17-204ENST00000453453 UBE2SQ16763 222 aa17.92■□□□□ 0.46
SNX17-204ENST00000453453 TPD52L1Q16890 204 aaPredicted RBP17.92■□□□□ 0.46
SNX17-204ENST00000453453 EARS2Q5JPH6 523 aaKnown RBP17.92■□□□□ 0.46
SNX17-204ENST00000453453 TTC38Q5R3I4 469 aa17.92■□□□□ 0.46
SNX17-204ENST00000453453 CEP135Q66GS9 1140 aa17.92■□□□□ 0.46
SNX17-204ENST00000453453 FTOQ9C0B1 505 aaKnown RBP eCLIP17.92■□□□□ 0.46
SNX17-204ENST00000453453 CLIC4Q9Y696 253 aa17.92■□□□□ 0.46
SNX17-204ENST00000453453 SMCHD1A6NHR9 2005 aa17.91■□□□□ 0.46
SNX17-204ENST00000453453 SPDYE3A6NKU9 549 aa17.91■□□□□ 0.46
SNX17-204ENST00000453453 GCOM1H8Y6P7 765 aaPredicted RBP17.91■□□□□ 0.46
SNX17-204ENST00000453453 ATP2A1O14983 1001 aa17.91■□□□□ 0.46
SNX17-204ENST00000453453 ADAMTS3O15072 1205 aa17.91■□□□□ 0.46
SNX17-204ENST00000453453 POLR2MP0CAP2 368 aa17.91■□□□□ 0.46
SNX17-204ENST00000453453 KCNJ6P48051 423 aa17.91■□□□□ 0.46
SNX17-204ENST00000453453 CLK2P49760 499 aaKnown RBP17.91■□□□□ 0.46
SNX17-204ENST00000453453 TOB1P50616 345 aaPredicted RBP17.91■□□□□ 0.46
SNX17-204ENST00000453453 FSTL1Q12841 308 aa17.91■□□□□ 0.46
SNX17-204ENST00000453453 MKRN3Q13064 507 aaKnown RBP17.91■□□□□ 0.46
SNX17-204ENST00000453453 MOGSQ13724 837 aa17.91■□□□□ 0.46
SNX17-204ENST00000453453 TKFCQ3LXA3 575 aa17.91■□□□□ 0.46
SNX17-204ENST00000453453 RGMBQ6NW40 437 aa17.91■□□□□ 0.46
SNX17-204ENST00000453453 NYAP1Q6ZVC0 841 aa17.91■□□□□ 0.46
SNX17-204ENST00000453453 SAPCD2Q86UD0 394 aa17.91■□□□□ 0.46
SNX17-204ENST00000453453 GTF3C2Q8WUA4 911 aaPredicted RBP17.91■□□□□ 0.46
SNX17-204ENST00000453453 ERO1AQ96HE7 468 aa17.91■□□□□ 0.46
SNX17-204ENST00000453453 TEX13BQ9BXU2 312 aa17.91■□□□□ 0.46
SNX17-204ENST00000453453 ASCC2Q9H1I8 757 aaPredicted RBP17.91■□□□□ 0.46
SNX17-204ENST00000453453 TMEM260Q9NX78 707 aa17.91■□□□□ 0.46
SNX17-204ENST00000453453 FAM53CQ9NYF3 392 aa17.91■□□□□ 0.46
SNX17-204ENST00000453453 SLC45A1Q9Y2W3 748 aa17.91■□□□□ 0.46
SNX17-204ENST00000453453 GOLGA6L19H0YKK7 550 aa17.9■□□□□ 0.46
SNX17-204ENST00000453453 PIK3CDO00329 1044 aa17.9■□□□□ 0.46
SNX17-204ENST00000453453 SPTLC2O15270 562 aa17.9■□□□□ 0.46
SNX17-204ENST00000453453 CFBP00751 764 aa17.9■□□□□ 0.46
SNX17-204ENST00000453453 GSDMDP57764 484 aa17.9■□□□□ 0.46
SNX17-204ENST00000453453 PLS1Q14651 629 aa17.9■□□□□ 0.46
SNX17-204ENST00000453453 SLC39A14Q15043 492 aa17.9■□□□□ 0.46
SNX17-204ENST00000453453 INF2Q27J81 1249 aa17.9■□□□□ 0.46
SNX17-204ENST00000453453 NOM1Q5C9Z4 860 aaKnown RBP17.9■□□□□ 0.46
SNX17-204ENST00000453453 SNRNP48Q6IEG0 339 aaKnown RBP17.9■□□□□ 0.46
SNX17-204ENST00000453453 USP17L6PQ6QN14 398 aa17.9■□□□□ 0.46
SNX17-204ENST00000453453 LBX2Q6XYB7 198 aa17.9■□□□□ 0.46
SNX17-204ENST00000453453 SAMD3Q8N6K7 520 aa17.9■□□□□ 0.46
SNX17-204ENST00000453453 LINC00301Q8NCQ3 95 aa17.9■□□□□ 0.46
SNX17-204ENST00000453453 REPS2Q8NFH8 660 aa17.9■□□□□ 0.46
SNX17-204ENST00000453453 C16orf45Q96MC5 204 aaPredicted RBP17.9■□□□□ 0.46
SNX17-204ENST00000453453 EHMT1Q9H9B1 1298 aa17.9■□□□□ 0.46
SNX17-204ENST00000453453 ABT1Q9ULW3 272 aaKnown RBP17.9■□□□□ 0.46
SNX17-204ENST00000453453 TLL2Q9Y6L7 1015 aa17.9■□□□□ 0.46
SNX17-204ENST00000453453 TAL1P17542 331 aaPredicted RBP17.9■□□□□ 0.46
SNX17-204ENST00000453453 ME1P48163 572 aa17.9■□□□□ 0.46
SNX17-204ENST00000453453 HERVK_113P62684 666 aa17.9■□□□□ 0.46
SNX17-204ENST00000453453 IQCB1Q15051 598 aa17.9■□□□□ 0.46
SNX17-204ENST00000453453 GPAT2Q6NUI2 795 aa17.9■□□□□ 0.46
SNX17-204ENST00000453453 NEK8Q86SG6 692 aa17.9■□□□□ 0.46
SNX17-204ENST00000453453 RASAL3Q86YV0 1011 aa17.9■□□□□ 0.46
SNX17-204ENST00000453453 KRT222Q8N1A0 295 aa17.9■□□□□ 0.46
SNX17-204ENST00000453453 KIF18AQ8NI77 898 aa17.9■□□□□ 0.46
SNX17-204ENST00000453453 TBCKQ8TEA7 893 aa17.9■□□□□ 0.46
SNX17-204ENST00000453453 CACTINQ8WUQ7 758 aaKnown RBP17.9■□□□□ 0.46
SNX17-204ENST00000453453 MS4A4AQ96JQ5 239 aa17.9■□□□□ 0.46
SNX17-204ENST00000453453 TRERF1Q96PN7 1200 aa17.9■□□□□ 0.46
SNX17-204ENST00000453453 P2RX7Q99572 595 aaKnown RBP17.9■□□□□ 0.46
SNX17-204ENST00000453453 NAP1L4Q99733 375 aaKnown RBP17.9■□□□□ 0.46
SNX17-204ENST00000453453 HOMER2Q9NSB8 354 aa17.9■□□□□ 0.46
SNX17-204ENST00000453453 PCDHB6Q9Y5E3 794 aa17.9■□□□□ 0.46
SNX17-204ENST00000453453 TMEM88BA6NKF7 163 aa17.89■□□□□ 0.45
SNX17-204ENST00000453453 SPDYE4A6NLX3 237 aa17.89■□□□□ 0.45
SNX17-204ENST00000453453 MEIS2O14770 477 aa17.89■□□□□ 0.45
SNX17-204ENST00000453453 STAT3P40763 770 aa17.89■□□□□ 0.45
SNX17-204ENST00000453453 ORC2Q13416 577 aaPredicted RBP17.89■□□□□ 0.45
SNX17-204ENST00000453453 TMEM132BQ14DG7 1078 aa17.89■□□□□ 0.45
SNX17-204ENST00000453453 ANKRD23Q86SG2 305 aa17.89■□□□□ 0.45
SNX17-204ENST00000453453 LRRC8AQ8IWT6 810 aa17.89■□□□□ 0.45
SNX17-204ENST00000453453 ANO3Q9BYT9 981 aa17.89■□□□□ 0.45
SNX17-204ENST00000453453 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.89■□□□□ 0.45
SNX17-204ENST00000453453 RNF146Q9NTX7 359 aa17.89■□□□□ 0.45
SNX17-204ENST00000453453 MAP3K20Q9NYL2 800 aaKnown RBP17.89■□□□□ 0.45
SNX17-204ENST00000453453 IMPACTQ9P2X3 320 aa17.89■□□□□ 0.45
SNX17-204ENST00000453453 ZNF214Q9UL59 606 aaPredicted RBP17.89■□□□□ 0.45
SNX17-204ENST00000453453 MYH7BA7E2Y1 1941 aa17.88■□□□□ 0.45
SNX17-204ENST00000453453 MANSC4A6NHS7 340 aaPredicted RBP17.88■□□□□ 0.45
SNX17-204ENST00000453453 OPLAHO14841 1288 aa17.88■□□□□ 0.45
SNX17-204ENST00000453453 PPP6R2O75170 966 aa17.88■□□□□ 0.45
SNX17-204ENST00000453453 LRMPQ12912 555 aa17.88■□□□□ 0.45
SNX17-204ENST00000453453 ZNF174Q15697 407 aa17.88■□□□□ 0.45
SNX17-204ENST00000453453 CKAP2LQ8IYA6 745 aa17.88■□□□□ 0.45
SNX17-204ENST00000453453 CCDC66A2RUB6 948 aa17.87■□□□□ 0.45
SNX17-204ENST00000453453 HOXA13P31271 388 aaPredicted RBP17.87■□□□□ 0.45
SNX17-204ENST00000453453 MCM7P33993 719 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms