RNA–Protein interactions for RNA: ENST00000453341.1

TNFRSF25-208, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 1 (best)

Gene TNFRSF25, Length 798 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-208ENST00000453341 PPP2R5BQ15173 497 aa25.72■■□□□ 1.71
TNFRSF25-208ENST00000453341 CTAGE1Q96RT6 745 aa25.72■■□□□ 1.71
TNFRSF25-208ENST00000453341 TSPY2A6NKD2 308 aa25.71■■□□□ 1.71
TNFRSF25-208ENST00000453341 KCNJ6P48051 423 aa25.71■■□□□ 1.71
TNFRSF25-208ENST00000453341 DEFB103AP81534 67 aa25.71■■□□□ 1.71
TNFRSF25-208ENST00000453341 CTDSPL2Q05D32 466 aa25.71■■□□□ 1.71
TNFRSF25-208ENST00000453341 CCDC96Q2M329 555 aa25.71■■□□□ 1.71
TNFRSF25-208ENST00000453341 PPP4R3BQ5MIZ7 849 aa25.71■■□□□ 1.71
TNFRSF25-208ENST00000453341 CLEC4DQ8WXI8 215 aa25.71■■□□□ 1.71
TNFRSF25-208ENST00000453341 LMCD1Q9NZU5 365 aa25.71■■□□□ 1.71
TNFRSF25-208ENST00000453341 RAD50Q92878 1312 aa25.7■■□□□ 1.71
TNFRSF25-208ENST00000453341 NKRFO15226 690 aaKnown RBP eCLIP25.7■■□□□ 1.7
TNFRSF25-208ENST00000453341 FOXP2O15409 715 aa25.7■■□□□ 1.7
TNFRSF25-208ENST00000453341 EDNRBP24530 442 aa25.7■■□□□ 1.7
TNFRSF25-208ENST00000453341 CALML3P27482 149 aa25.7■■□□□ 1.7
TNFRSF25-208ENST00000453341 NOVP48745 357 aa25.7■■□□□ 1.7
TNFRSF25-208ENST00000453341 BRDTQ58F21 947 aaPredicted RBP25.7■■□□□ 1.7
TNFRSF25-208ENST00000453341 BTNL9Q6UXG8 535 aa25.7■■□□□ 1.7
TNFRSF25-208ENST00000453341 NOD1Q9Y239 953 aa25.7■■□□□ 1.7
TNFRSF25-208ENST00000453341 KPNA6O60684 536 aa25.69■■□□□ 1.7
TNFRSF25-208ENST00000453341 ARIH2O95376 493 aa25.69■■□□□ 1.7
TNFRSF25-208ENST00000453341 TCTN1Q2MV58 587 aa25.69■■□□□ 1.7
TNFRSF25-208ENST00000453341 DCAF4Q8WV16 495 aa25.69■■□□□ 1.7
TNFRSF25-208ENST00000453341 GPATCH3Q96I76 525 aa25.69■■□□□ 1.7
TNFRSF25-208ENST00000453341 SUGCTQ9HAC7 445 aa25.69■■□□□ 1.7
TNFRSF25-208ENST00000453341 WDFY4Q6ZS81 3184 aa25.69■■□□□ 1.7
TNFRSF25-208ENST00000453341 CHMP4BP1P59074 171 aa25.68■■□□□ 1.7
TNFRSF25-208ENST00000453341 PDE4DQ08499 809 aa25.68■■□□□ 1.7
TNFRSF25-208ENST00000453341 PTGISQ16647 500 aa25.68■■□□□ 1.7
TNFRSF25-208ENST00000453341 LRRFIP1Q32MZ4 808 aaKnown RBP25.68■■□□□ 1.7
TNFRSF25-208ENST00000453341 SYDE2Q5VT97 1194 aa25.68■■□□□ 1.7
TNFRSF25-208ENST00000453341 ALYREFQ86V81 257 aaKnown RBP25.68■■□□□ 1.7
TNFRSF25-208ENST00000453341 SCFD2Q8WU76 684 aa25.68■■□□□ 1.7
TNFRSF25-208ENST00000453341 DHX38Q92620 1227 aaKnown RBP25.68■■□□□ 1.7
TNFRSF25-208ENST00000453341 UBE2ZQ9H832 354 aaPredicted RBP25.68■■□□□ 1.7
TNFRSF25-208ENST00000453341 MTUS1Q9ULD2 1270 aa25.68■■□□□ 1.7
TNFRSF25-208ENST00000453341 SIP14410 1827 aa25.67■■□□□ 1.7
TNFRSF25-208ENST00000453341 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP25.67■■□□□ 1.7
TNFRSF25-208ENST00000453341 TXNP10599 105 aaKnown RBP25.67■■□□□ 1.7
TNFRSF25-208ENST00000453341 GDF6Q6KF10 455 aaPredicted RBP25.67■■□□□ 1.7
TNFRSF25-208ENST00000453341 RNF207Q6ZRF8 634 aa25.67■■□□□ 1.7
TNFRSF25-208ENST00000453341 CAGE1Q8TC20 777 aa25.67■■□□□ 1.7
TNFRSF25-208ENST00000453341 AFAP1L1Q8TED9 768 aa25.67■■□□□ 1.7
TNFRSF25-208ENST00000453341 FRMPD2Q68DX3 1309 aaPredicted RBP25.66■■□□□ 1.7
TNFRSF25-208ENST00000453341 RPS6P62753 249 aaKnown RBP25.66■■□□□ 1.7
TNFRSF25-208ENST00000453341 ZMYM1Q5SVZ6 1142 aa25.66■■□□□ 1.7
TNFRSF25-208ENST00000453341 FAM178BQ8IXR5 827 aa25.66■■□□□ 1.7
TNFRSF25-208ENST00000453341 ZBED2Q9BTP6 218 aa25.66■■□□□ 1.7
TNFRSF25-208ENST00000453341 CHMP4BQ9H444 224 aaKnown RBP25.66■■□□□ 1.7
TNFRSF25-208ENST00000453341 LINC01553A4QN01 128 aa25.65■■□□□ 1.7
TNFRSF25-208ENST00000453341 ERVK-21P61565 698 aa25.65■■□□□ 1.7
TNFRSF25-208ENST00000453341 CNKSR3Q6P9H4 555 aa25.65■■□□□ 1.7
TNFRSF25-208ENST00000453341 GJD3Q8N144 294 aa25.65■■□□□ 1.7
TNFRSF25-208ENST00000453341 CCDC155Q8N6L0 562 aa25.65■■□□□ 1.7
TNFRSF25-208ENST00000453341 GADD45GIP1Q8TAE8 222 aaPredicted RBP25.65■■□□□ 1.7
TNFRSF25-208ENST00000453341 GPCPD1Q9NPB8 672 aa25.65■■□□□ 1.7
TNFRSF25-208ENST00000453341 TRIOO75962 3097 aa25.65■■□□□ 1.7
TNFRSF25-208ENST00000453341 PRR33A8MZF0 331 aa25.64■■□□□ 1.7
TNFRSF25-208ENST00000453341 RANBP6O60518 1105 aaKnown RBP25.64■■□□□ 1.7
TNFRSF25-208ENST00000453341 NBNO60934 754 aa25.64■■□□□ 1.7
TNFRSF25-208ENST00000453341 GJB5O95377 273 aa25.64■■□□□ 1.7
TNFRSF25-208ENST00000453341 CXCL10P02778 98 aa25.64■■□□□ 1.7
TNFRSF25-208ENST00000453341 SELPP16109 830 aa25.64■■□□□ 1.7
TNFRSF25-208ENST00000453341 LEXMQ3ZCV2 418 aa25.64■■□□□ 1.7
TNFRSF25-208ENST00000453341 LRRC8DQ7L1W4 858 aa25.64■■□□□ 1.7
TNFRSF25-208ENST00000453341 KAT2BQ92831 832 aa25.64■■□□□ 1.7
TNFRSF25-208ENST00000453341 TGS1Q96RS0 853 aaKnown RBP25.64■■□□□ 1.7
TNFRSF25-208ENST00000453341 RAD9AQ99638 391 aa25.64■■□□□ 1.7
TNFRSF25-208ENST00000453341 MMP3P08254 477 aa25.63■■□□□ 1.69
TNFRSF25-208ENST00000453341 KCNA5P22460 613 aa25.63■■□□□ 1.69
TNFRSF25-208ENST00000453341 RBL2Q08999 1139 aa25.63■■□□□ 1.69
TNFRSF25-208ENST00000453341 SESTD1Q86VW0 696 aa25.63■■□□□ 1.69
TNFRSF25-208ENST00000453341 DNERQ8NFT8 737 aa25.63■■□□□ 1.69
TNFRSF25-208ENST00000453341 AFG1LQ8WV93 481 aa25.63■■□□□ 1.69
TNFRSF25-208ENST00000453341 IL9P15248 144 aa25.62■■□□□ 1.69
TNFRSF25-208ENST00000453341 C20orf194Q5TEA3 1177 aa25.62■■□□□ 1.69
TNFRSF25-208ENST00000453341 CCDC62Q6P9F0 684 aa25.62■■□□□ 1.69
TNFRSF25-208ENST00000453341 TMEM47Q9BQJ4 181 aa25.62■■□□□ 1.69
TNFRSF25-208ENST00000453341 FSD1Q9BTV5 496 aa25.62■■□□□ 1.69
TNFRSF25-208ENST00000453341 DCTPP1Q9H773 170 aa25.62■■□□□ 1.69
TNFRSF25-208ENST00000453341 ANAPC4Q9UJX5 808 aa25.62■■□□□ 1.69
TNFRSF25-208ENST00000453341 ORC4O43929 436 aa25.61■■□□□ 1.69
TNFRSF25-208ENST00000453341 CKBP12277 381 aa25.61■■□□□ 1.69
TNFRSF25-208ENST00000453341 PI4K2BQ8TCG2 481 aa25.61■■□□□ 1.69
TNFRSF25-208ENST00000453341 VPS53Q5VIR6 699 aa25.6■■□□□ 1.69
TNFRSF25-208ENST00000453341 FAM117BQ6P1L5 589 aa25.6■■□□□ 1.69
TNFRSF25-208ENST00000453341 TRAF7Q6Q0C0 670 aa25.6■■□□□ 1.69
TNFRSF25-208ENST00000453341 MPHOSPH6Q99547 160 aaKnown RBP25.6■■□□□ 1.69
TNFRSF25-208ENST00000453341 ABHD14A-ACY1A0A1B0GW23 586 aa25.59■■□□□ 1.69
TNFRSF25-208ENST00000453341 FGRP09769 529 aa25.59■■□□□ 1.69
TNFRSF25-208ENST00000453341 PDHBP11177 359 aa25.59■■□□□ 1.69
TNFRSF25-208ENST00000453341 TOP1P11387 765 aaKnown RBP25.59■■□□□ 1.69
TNFRSF25-208ENST00000453341 ARHGAP1Q07960 439 aa25.59■■□□□ 1.69
TNFRSF25-208ENST00000453341 LY6KQ17RY6 165 aa25.59■■□□□ 1.69
TNFRSF25-208ENST00000453341 PTCRAQ6ISU1 281 aaPredicted RBP25.59■■□□□ 1.69
TNFRSF25-208ENST00000453341 GTF2IRD1Q9UHL9 959 aa25.59■■□□□ 1.69
TNFRSF25-208ENST00000453341 WDR19Q8NEZ3 1342 aa25.59■■□□□ 1.69
TNFRSF25-208ENST00000453341 C5orf42Q9H799 3197 aa25.58■■□□□ 1.69
TNFRSF25-208ENST00000453341 PARNO95453 639 aaKnown RBP25.58■■□□□ 1.69
TNFRSF25-208ENST00000453341 SSTR3P32745 418 aaPredicted RBP25.58■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms