RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 NOD1Q9Y239 953 aa16.83■□□□□ 0.28
LYSMD3-202ENST00000453259 HCN4Q9Y3Q4 1203 aa16.83■□□□□ 0.28
LYSMD3-202ENST00000453259 FOXP2O15409 715 aa16.82■□□□□ 0.28
LYSMD3-202ENST00000453259 NMT2O60551 498 aa16.82■□□□□ 0.28
LYSMD3-202ENST00000453259 EFCAB14O75071 495 aa16.82■□□□□ 0.28
LYSMD3-202ENST00000453259 KCNJ6P48051 423 aa16.82■□□□□ 0.28
LYSMD3-202ENST00000453259 TFF2Q03403 129 aa16.82■□□□□ 0.28
LYSMD3-202ENST00000453259 RBL2Q08999 1139 aa16.82■□□□□ 0.28
LYSMD3-202ENST00000453259 TMEM63BQ5T3F8 832 aa16.82■□□□□ 0.28
LYSMD3-202ENST00000453259 MIER1Q8N108 512 aa16.82■□□□□ 0.28
LYSMD3-202ENST00000453259 CLEC4DQ8WXI8 215 aa16.82■□□□□ 0.28
LYSMD3-202ENST00000453259 FTOQ9C0B1 505 aaKnown RBP eCLIP16.82■□□□□ 0.28
LYSMD3-202ENST00000453259 MX1P20591 662 aa16.81■□□□□ 0.28
LYSMD3-202ENST00000453259 PTGS1P23219 599 aa16.81■□□□□ 0.28
LYSMD3-202ENST00000453259 KCNQ1P51787 676 aa16.81■□□□□ 0.28
LYSMD3-202ENST00000453259 SNAP25P60880 206 aa16.81■□□□□ 0.28
LYSMD3-202ENST00000453259 CTDSPL2Q05D32 466 aa16.81■□□□□ 0.28
LYSMD3-202ENST00000453259 GPATCH4Q5T3I0 446 aaKnown RBP16.81■□□□□ 0.28
LYSMD3-202ENST00000453259 SLC30A10Q6XR72 485 aa16.81■□□□□ 0.28
LYSMD3-202ENST00000453259 PURBQ96QR8 312 aaKnown RBP16.81■□□□□ 0.28
LYSMD3-202ENST00000453259 HELLSQ9NRZ9 838 aa16.81■□□□□ 0.28
LYSMD3-202ENST00000453259 DDX49Q9Y6V7 483 aaKnown RBP16.81■□□□□ 0.28
LYSMD3-202ENST00000453259 PRRC2BQ5JSZ5 2229 aaKnown RBP16.81■□□□□ 0.28
LYSMD3-202ENST00000453259 REV3LO60673 3130 aa16.81■□□□□ 0.28
LYSMD3-202ENST00000453259 TLL1O43897 1013 aa16.8■□□□□ 0.28
LYSMD3-202ENST00000453259 TXNP10599 105 aaKnown RBP16.8■□□□□ 0.28
LYSMD3-202ENST00000453259 PDHBP11177 359 aa16.8■□□□□ 0.28
LYSMD3-202ENST00000453259 CALML3P27482 149 aa16.8■□□□□ 0.28
LYSMD3-202ENST00000453259 RPS6P62753 249 aaKnown RBP16.8■□□□□ 0.28
LYSMD3-202ENST00000453259 ARNTL2Q8WYA1 636 aa16.8■□□□□ 0.28
LYSMD3-202ENST00000453259 EVI5LQ96CN4 794 aa16.8■□□□□ 0.28
LYSMD3-202ENST00000453259 TMEM47Q9BQJ4 181 aa16.8■□□□□ 0.28
LYSMD3-202ENST00000453259 SNHG28P0DPA3 235 aa16.79■□□□□ 0.28
LYSMD3-202ENST00000453259 SLC16A2P36021 539 aa16.79■□□□□ 0.28
LYSMD3-202ENST00000453259 ZNF543Q08ER8 600 aa16.79■□□□□ 0.28
LYSMD3-202ENST00000453259 PTGISQ16647 500 aa16.79■□□□□ 0.28
LYSMD3-202ENST00000453259 C20orf194Q5TEA3 1177 aa16.79■□□□□ 0.28
LYSMD3-202ENST00000453259 TTBK2Q6IQ55 1244 aa16.79■□□□□ 0.28
LYSMD3-202ENST00000453259 NECAB3Q96P71 396 aaPredicted RBP16.79■□□□□ 0.28
LYSMD3-202ENST00000453259 ABHD14A-ACY1A0A1B0GW23 586 aa16.78■□□□□ 0.28
LYSMD3-202ENST00000453259 SELPP16109 830 aa16.78■□□□□ 0.28
LYSMD3-202ENST00000453259 GRB10Q13322 594 aa16.78■□□□□ 0.28
LYSMD3-202ENST00000453259 TMEM31Q5JXX7 168 aa16.78■□□□□ 0.28
LYSMD3-202ENST00000453259 CNKSR3Q6P9H4 555 aa16.78■□□□□ 0.28
LYSMD3-202ENST00000453259 RASGRP2Q7LDG7 609 aa16.78■□□□□ 0.28
LYSMD3-202ENST00000453259 IWS1Q96ST2 819 aa16.78■□□□□ 0.28
LYSMD3-202ENST00000453259 KATNAL1Q9BW62 490 aa16.78■□□□□ 0.28
LYSMD3-202ENST00000453259 RAPGEFL1Q9UHV5 662 aa16.78■□□□□ 0.28
LYSMD3-202ENST00000453259 MTMR7Q9Y216 660 aa16.78■□□□□ 0.28
LYSMD3-202ENST00000453259 SCN5AQ14524 2016 aa16.78■□□□□ 0.28
LYSMD3-202ENST00000453259 EPOPA6NHQ4 379 aa16.77■□□□□ 0.28
LYSMD3-202ENST00000453259 GPR37L1O60883 481 aa16.77■□□□□ 0.28
LYSMD3-202ENST00000453259 GH1P01241 217 aa16.77■□□□□ 0.28
LYSMD3-202ENST00000453259 CXCL10P02778 98 aa16.77■□□□□ 0.28
LYSMD3-202ENST00000453259 CASTP20810 708 aaKnown RBP16.77■□□□□ 0.28
LYSMD3-202ENST00000453259 WDR5P61964 334 aaKnown RBP16.77■□□□□ 0.28
LYSMD3-202ENST00000453259 CCDC62Q6P9F0 684 aa16.77■□□□□ 0.28
LYSMD3-202ENST00000453259 LRRC8DQ7L1W4 858 aa16.77■□□□□ 0.28
LYSMD3-202ENST00000453259 EMID1Q96A84 441 aaPredicted RBP16.77■□□□□ 0.28
LYSMD3-202ENST00000453259 CHMP4CQ96CF2 233 aa16.77■□□□□ 0.28
LYSMD3-202ENST00000453259 GPCPD1Q9NPB8 672 aa16.77■□□□□ 0.28
LYSMD3-202ENST00000453259 TOMM22Q9NS69 142 aa16.77■□□□□ 0.28
LYSMD3-202ENST00000453259 ZBTB47Q9UFB7 747 aaPredicted RBP16.77■□□□□ 0.28
LYSMD3-202ENST00000453259 TCF20Q9UGU0 1960 aaKnown RBP16.77■□□□□ 0.27
LYSMD3-202ENST00000453259 FRMPD2Q68DX3 1309 aaPredicted RBP16.76■□□□□ 0.27
LYSMD3-202ENST00000453259 SALL3Q9BXA9 1300 aa16.76■□□□□ 0.27
LYSMD3-202ENST00000453259 RFXAPO00287 272 aa16.76■□□□□ 0.27
LYSMD3-202ENST00000453259 LPXNO60711 386 aa16.76■□□□□ 0.27
LYSMD3-202ENST00000453259 MMP3P08254 477 aa16.76■□□□□ 0.27
LYSMD3-202ENST00000453259 CCDC178Q5BJE1 867 aa16.76■□□□□ 0.27
LYSMD3-202ENST00000453259 MCF2L2Q86YR7 1114 aa16.76■□□□□ 0.27
LYSMD3-202ENST00000453259 NSUN6Q8TEA1 469 aaKnown RBP16.76■□□□□ 0.27
LYSMD3-202ENST00000453259 RAD9AQ99638 391 aa16.76■□□□□ 0.27
LYSMD3-202ENST00000453259 LRFN3Q9BTN0 628 aa16.76■□□□□ 0.27
LYSMD3-202ENST00000453259 ZBED2Q9BTP6 218 aa16.76■□□□□ 0.27
LYSMD3-202ENST00000453259 RNF41Q9H4P4 317 aaPredicted RBP16.76■□□□□ 0.27
LYSMD3-202ENST00000453259 CERS4Q9HA82 394 aa16.76■□□□□ 0.27
LYSMD3-202ENST00000453259 ABCB11O95342 1321 aa16.75■□□□□ 0.27
LYSMD3-202ENST00000453259 GJB5O95377 273 aa16.75■□□□□ 0.27
LYSMD3-202ENST00000453259 FGAP02671 866 aa16.75■□□□□ 0.27
LYSMD3-202ENST00000453259 DGKDQ16760 1214 aa16.75■□□□□ 0.27
LYSMD3-202ENST00000453259 MCMDC2Q4G0Z9 681 aa16.75■□□□□ 0.27
LYSMD3-202ENST00000453259 VPS53Q5VIR6 699 aa16.75■□□□□ 0.27
LYSMD3-202ENST00000453259 DGKHQ86XP1 1220 aa16.75■□□□□ 0.27
LYSMD3-202ENST00000453259 INCENPQ9NQS7 918 aa16.75■□□□□ 0.27
LYSMD3-202ENST00000453259 GTF2IRD1Q9UHL9 959 aa16.75■□□□□ 0.27
LYSMD3-202ENST00000453259 COL4A4P53420 1690 aaPredicted RBP16.75■□□□□ 0.27
LYSMD3-202ENST00000453259 EMSYQ7Z589 1322 aa16.74■□□□□ 0.27
LYSMD3-202ENST00000453259 MFAP1P55081 439 aaKnown RBP16.74■□□□□ 0.27
LYSMD3-202ENST00000453259 ERVK-21P61565 698 aa16.74■□□□□ 0.27
LYSMD3-202ENST00000453259 ARHGAP1Q07960 439 aa16.74■□□□□ 0.27
LYSMD3-202ENST00000453259 STXBP2Q15833 593 aa16.74■□□□□ 0.27
LYSMD3-202ENST00000453259 RRP12Q5JTH9 1297 aaKnown RBP16.74■□□□□ 0.27
LYSMD3-202ENST00000453259 DIEXFQ68CQ4 756 aaKnown RBP16.74■□□□□ 0.27
LYSMD3-202ENST00000453259 MFSD6Q6ZSS7 791 aa16.74■□□□□ 0.27
LYSMD3-202ENST00000453259 AFG1LQ8WV93 481 aa16.74■□□□□ 0.27
LYSMD3-202ENST00000453259 ESR2Q92731 530 aa16.74■□□□□ 0.27
LYSMD3-202ENST00000453259 TGS1Q96RS0 853 aaKnown RBP16.74■□□□□ 0.27
LYSMD3-202ENST00000453259 CTAGE1Q96RT6 745 aa16.74■□□□□ 0.27
LYSMD3-202ENST00000453259 ARHGEF15O94989 841 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms