RNA–Protein interactions for RNA: ENST00000453141.5

HDLBP-226, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-226ENST00000453141 TOP1P11387 765 aaKnown RBP8.82□□□□□ -1
HDLBP-226ENST00000453141 PCP11498 1178 aaKnown RBP8.82□□□□□ -1
HDLBP-226ENST00000453141 NCLP19338 710 aaKnown RBP8.82□□□□□ -1
HDLBP-226ENST00000453141 IRX5P78411 483 aaPredicted RBP8.82□□□□□ -1
HDLBP-226ENST00000453141 HMGN5P82970 282 aaKnown RBP8.82□□□□□ -1
HDLBP-226ENST00000453141 EXOSC10Q01780 885 aaKnown RBP8.82□□□□□ -1
HDLBP-226ENST00000453141 FPGSQ05932 587 aa8.82□□□□□ -1
HDLBP-226ENST00000453141 APOBRQ0VD83 1088 aa8.82□□□□□ -1
HDLBP-226ENST00000453141 FAAP100Q0VG06 881 aa8.82□□□□□ -1
HDLBP-226ENST00000453141 MUM1L1Q5H9M0 696 aa8.82□□□□□ -1
HDLBP-226ENST00000453141 CAVIN1Q6NZI2 390 aaKnown RBP8.82□□□□□ -1
HDLBP-226ENST00000453141 NSMFQ6X4W1 530 aa8.82□□□□□ -1
HDLBP-226ENST00000453141 TBC1D10CQ8IV04 446 aa8.82□□□□□ -1
HDLBP-226ENST00000453141 FBXL16Q8N461 479 aa8.82□□□□□ -1
HDLBP-226ENST00000453141 FAM184AQ8NB25 1140 aa8.82□□□□□ -1
HDLBP-226ENST00000453141 SYAP1Q96A49 352 aaPredicted RBP8.82□□□□□ -1
HDLBP-226ENST00000453141 TMEM47Q9BQJ4 181 aa8.82□□□□□ -1
HDLBP-226ENST00000453141 RANBP17Q9H2T7 1088 aaKnown RBP8.82□□□□□ -1
HDLBP-226ENST00000453141 TCP11L1Q9NUJ3 509 aa8.82□□□□□ -1
HDLBP-226ENST00000453141 TMEM39AQ9NV64 488 aa8.82□□□□□ -1
HDLBP-226ENST00000453141 RNF216Q9NWF9 866 aaPredicted RBP8.82□□□□□ -1
HDLBP-226ENST00000453141 CYP39A1Q9NYL5 469 aa8.82□□□□□ -1
HDLBP-226ENST00000453141 NAP1L2Q9ULW6 460 aaPredicted RBP8.82□□□□□ -1
HDLBP-226ENST00000453141 FRMPD2Q68DX3 1309 aaPredicted RBP8.81□□□□□ -1
HDLBP-226ENST00000453141 UNC80Q8N2C7 3258 aa8.81□□□□□ -1
HDLBP-226ENST00000453141 A0A0U1RQG5 324 aaPredicted RBP8.81□□□□□ -1
HDLBP-226ENST00000453141 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.81□□□□□ -1
HDLBP-226ENST00000453141 PTPDC1A2A3K4 754 aa8.81□□□□□ -1
HDLBP-226ENST00000453141 GOLGA8BA8MQT2 603 aa8.81□□□□□ -1
HDLBP-226ENST00000453141 SLC16A2P36021 539 aa8.81□□□□□ -1
HDLBP-226ENST00000453141 NKX3-2P78367 333 aa8.81□□□□□ -1
HDLBP-226ENST00000453141 SMAD3P84022 425 aaKnown RBP8.81□□□□□ -1
HDLBP-226ENST00000453141 TNFAIP2Q03169 654 aa8.81□□□□□ -1
HDLBP-226ENST00000453141 SCRN1Q12765 414 aa8.81□□□□□ -1
HDLBP-226ENST00000453141 GNASQ5JWF2 1037 aa8.81□□□□□ -1
HDLBP-226ENST00000453141 AKNAD1Q5T1N1 836 aa8.81□□□□□ -1
HDLBP-226ENST00000453141 ZNF697Q5TEC3 545 aa8.81□□□□□ -1
HDLBP-226ENST00000453141 SYDE2Q5VT97 1194 aa8.81□□□□□ -1
HDLBP-226ENST00000453141 LARP1BQ659C4 914 aaKnown RBP8.81□□□□□ -1
HDLBP-226ENST00000453141 TTBK2Q6IQ55 1244 aa8.81□□□□□ -1
HDLBP-226ENST00000453141 BTNL9Q6UXG8 535 aa8.81□□□□□ -1
HDLBP-226ENST00000453141 MFSD6Q6ZSS7 791 aa8.81□□□□□ -1
HDLBP-226ENST00000453141 TLK2Q86UE8 772 aa8.81□□□□□ -1
HDLBP-226ENST00000453141 NSUN7Q8NE18 718 aaKnown RBP8.81□□□□□ -1
HDLBP-226ENST00000453141 UBE2Q2Q8WVN8 375 aa8.81□□□□□ -1
HDLBP-226ENST00000453141 VTI1AQ96AJ9 217 aa8.81□□□□□ -1
HDLBP-226ENST00000453141 ZNF274Q96GC6 653 aaPredicted RBP8.81□□□□□ -1
HDLBP-226ENST00000453141 FAM161BQ96MY7 647 aa8.81□□□□□ -1
HDLBP-226ENST00000453141 GUCD1Q96NT3 240 aa8.81□□□□□ -1
HDLBP-226ENST00000453141 RNF41Q9H4P4 317 aaPredicted RBP8.81□□□□□ -1
HDLBP-226ENST00000453141 SMCHD1A6NHR9 2005 aa8.81□□□□□ -1
HDLBP-226ENST00000453141 NEDD4P46934 1319 aa8.8□□□□□ -1
HDLBP-226ENST00000453141 KLF18A0A0U1RQI7 1052 aa8.8□□□□□ -1
HDLBP-226ENST00000453141 CTAGE5O15320 804 aa8.8□□□□□ -1
HDLBP-226ENST00000453141 FIBPO43427 364 aa8.8□□□□□ -1
HDLBP-226ENST00000453141 JAK2O60674 1132 aa8.8□□□□□ -1
HDLBP-226ENST00000453141 TIMP1P01033 207 aa8.8□□□□□ -1
HDLBP-226ENST00000453141 PDHBP11177 359 aa8.8□□□□□ -1
HDLBP-226ENST00000453141 MRE11P49959 708 aa8.8□□□□□ -1
HDLBP-226ENST00000453141 CDK7P50613 346 aa8.8□□□□□ -1
HDLBP-226ENST00000453141 EPHB4P54760 987 aa8.8□□□□□ -1
HDLBP-226ENST00000453141 KRT85P78386 507 aa8.8□□□□□ -1
HDLBP-226ENST00000453141 BEX3Q00994 111 aa8.8□□□□□ -1
HDLBP-226ENST00000453141 FOXD4L6Q3SYB3 417 aaPredicted RBP8.8□□□□□ -1
HDLBP-226ENST00000453141 FOXD4L3Q6VB84 417 aaPredicted RBP8.8□□□□□ -1
HDLBP-226ENST00000453141 EEPD1Q7L9B9 569 aa8.8□□□□□ -1
HDLBP-226ENST00000453141 CHST3Q7LGC8 479 aa8.8□□□□□ -1
HDLBP-226ENST00000453141 FBXO16Q8IX29 292 aaPredicted RBP8.8□□□□□ -1
HDLBP-226ENST00000453141 SMARCC2Q8TAQ2 1214 aa8.8□□□□□ -1
HDLBP-226ENST00000453141 GPT2Q8TD30 523 aa8.8□□□□□ -1
HDLBP-226ENST00000453141 MORC4Q8TE76 937 aa8.8□□□□□ -1
HDLBP-226ENST00000453141 ESR2Q92731 530 aa8.8□□□□□ -1
HDLBP-226ENST00000453141 CHAMP1Q96JM3 812 aa8.8□□□□□ -1
HDLBP-226ENST00000453141 RNPC3Q96LT9 517 aaKnown RBP8.8□□□□□ -1
HDLBP-226ENST00000453141 CNNM2Q9H8M5 875 aa8.8□□□□□ -1
HDLBP-226ENST00000453141 VTA1Q9NP79 307 aa8.8□□□□□ -1
HDLBP-226ENST00000453141 GPCPD1Q9NPB8 672 aa8.8□□□□□ -1
HDLBP-226ENST00000453141 TBX21Q9UL17 535 aa8.8□□□□□ -1
HDLBP-226ENST00000453141 GNEQ9Y223 722 aaKnown RBP8.8□□□□□ -1
HDLBP-226ENST00000453141 CDH23Q9H251 3354 aa8.79□□□□□ -1
HDLBP-226ENST00000453141 NID2Q14112 1375 aa8.79□□□□□ -1
HDLBP-226ENST00000453141 EYSQ5T1H1 3165 aa8.79□□□□□ -1
HDLBP-226ENST00000453141 LOC102724159A0A0B4J2E5 919 aa8.79□□□□□ -1
HDLBP-226ENST00000453141 H3BQV1 296 aa8.79□□□□□ -1
HDLBP-226ENST00000453141 ARVCFO00192 962 aa8.79□□□□□ -1
HDLBP-226ENST00000453141 NFIBO00712 420 aa8.79□□□□□ -1
HDLBP-226ENST00000453141 TLR3O15455 904 aaKnown RBP8.79□□□□□ -1
HDLBP-226ENST00000453141 CABYRO75952 493 aa8.79□□□□□ -1
HDLBP-226ENST00000453141 SNHG28P0DPA3 235 aa8.79□□□□□ -1
HDLBP-226ENST00000453141 SMPD1P17405 629 aa8.79□□□□□ -1
HDLBP-226ENST00000453141 NT5C2P49902 561 aa8.79□□□□□ -1
HDLBP-226ENST00000453141 ALDH5A1P51649 535 aaPredicted RBP8.79□□□□□ -1
HDLBP-226ENST00000453141 EVCP57679 992 aa8.79□□□□□ -1
HDLBP-226ENST00000453141 ANTXR2P58335 489 aa8.79□□□□□ -1
HDLBP-226ENST00000453141 ZNF445P59923 1031 aa8.79□□□□□ -1
HDLBP-226ENST00000453141 ZNF543Q08ER8 600 aa8.79□□□□□ -1
HDLBP-226ENST00000453141 BAATQ14032 418 aaPredicted RBP8.79□□□□□ -1
HDLBP-226ENST00000453141 PWP2Q15269 919 aaKnown RBP8.79□□□□□ -1
HDLBP-226ENST00000453141 FSCN1Q16658 493 aaKnown RBP8.79□□□□□ -1
HDLBP-226ENST00000453141 ZSCAN23Q3MJ62 389 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms