RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 LOC102724159A0A0B4J2E5 919 aa19.74■□□□□ 0.75
PRPF40A-204ENST00000450303 A0A0U1RQG5 324 aaPredicted RBP19.74■□□□□ 0.75
PRPF40A-204ENST00000450303 ARVCFO00192 962 aa19.74■□□□□ 0.75
PRPF40A-204ENST00000450303 RAG1P15918 1043 aa19.74■□□□□ 0.75
PRPF40A-204ENST00000450303 EDNRBP24530 442 aa19.74■□□□□ 0.75
PRPF40A-204ENST00000450303 CDK7P50613 346 aa19.74■□□□□ 0.75
PRPF40A-204ENST00000450303 PWP2Q15269 919 aaKnown RBP19.74■□□□□ 0.75
PRPF40A-204ENST00000450303 LRIT3Q3SXY7 679 aa19.74■□□□□ 0.75
PRPF40A-204ENST00000450303 DUSP28Q4G0W2 176 aa19.74■□□□□ 0.75
PRPF40A-204ENST00000450303 DHX32Q7L7V1 743 aaKnown RBP19.74■□□□□ 0.75
PRPF40A-204ENST00000450303 MCF2L2Q86YR7 1114 aa19.74■□□□□ 0.75
PRPF40A-204ENST00000450303 TOX2Q96NM4 488 aa19.74■□□□□ 0.75
PRPF40A-204ENST00000450303 PIGSQ96S52 555 aa19.74■□□□□ 0.75
PRPF40A-204ENST00000450303 MPHOSPH6Q99547 160 aaKnown RBP19.74■□□□□ 0.75
PRPF40A-204ENST00000450303 AMNQ9BXJ7 453 aa19.74■□□□□ 0.75
PRPF40A-204ENST00000450303 ZSWIM6Q9HCJ5 1215 aa19.74■□□□□ 0.75
PRPF40A-204ENST00000450303 Q9Y3F1 56 aa19.74■□□□□ 0.75
PRPF40A-204ENST00000450303 RBM47A0AV96 593 aaKnown RBP19.73■□□□□ 0.75
PRPF40A-204ENST00000450303 ZBTB5O15062 677 aa19.73■□□□□ 0.75
PRPF40A-204ENST00000450303 KIAA0355O15063 1070 aa19.73■□□□□ 0.75
PRPF40A-204ENST00000450303 PRC1O43663 620 aa19.73■□□□□ 0.75
PRPF40A-204ENST00000450303 CFBP00751 764 aa19.73■□□□□ 0.75
PRPF40A-204ENST00000450303 TROAPQ12815 778 aa19.73■□□□□ 0.75
PRPF40A-204ENST00000450303 SHHQ15465 462 aa19.73■□□□□ 0.75
PRPF40A-204ENST00000450303 C9orf50Q5SZB4 431 aa19.73■□□□□ 0.75
PRPF40A-204ENST00000450303 RUFY3Q7L099 469 aa19.73■□□□□ 0.75
PRPF40A-204ENST00000450303 CATIPQ7Z7H3 387 aa19.73■□□□□ 0.75
PRPF40A-204ENST00000450303 PIBF1Q8WXW3 757 aa19.73■□□□□ 0.75
PRPF40A-204ENST00000450303 COPS5Q92905 334 aa19.73■□□□□ 0.75
PRPF40A-204ENST00000450303 MTMR8Q96EF0 704 aa19.73■□□□□ 0.75
PRPF40A-204ENST00000450303 MYL10Q9BUA6 226 aa19.73■□□□□ 0.75
PRPF40A-204ENST00000450303 PCDHA1Q9Y5I3 950 aa19.73■□□□□ 0.75
PRPF40A-204ENST00000450303 B4DLN1 442 aa19.72■□□□□ 0.75
PRPF40A-204ENST00000450303 OPLAHO14841 1288 aa19.72■□□□□ 0.75
PRPF40A-204ENST00000450303 ZEB2O60315 1214 aa19.72■□□□□ 0.75
PRPF40A-204ENST00000450303 MRPL12P52815 198 aaKnown RBP19.72■□□□□ 0.75
PRPF40A-204ENST00000450303 PSMC6P62333 389 aa19.72■□□□□ 0.75
PRPF40A-204ENST00000450303 OR6J1Q8NGC5 347 aa19.72■□□□□ 0.75
PRPF40A-204ENST00000450303 MTA3Q9BTC8 594 aa19.72■□□□□ 0.75
PRPF40A-204ENST00000450303 RIOX1Q9H6W3 641 aa19.72■□□□□ 0.75
PRPF40A-204ENST00000450303 LY9Q9HBG7 655 aa19.72■□□□□ 0.75
PRPF40A-204ENST00000450303 DAXXQ9UER7 740 aaPredicted RBP19.72■□□□□ 0.75
PRPF40A-204ENST00000450303 SZT2Q5T011 3432 aa19.72■□□□□ 0.75
PRPF40A-204ENST00000450303 CYTH3O43739 400 aa19.71■□□□□ 0.75
PRPF40A-204ENST00000450303 TXNP10599 105 aaKnown RBP19.71■□□□□ 0.75
PRPF40A-204ENST00000450303 EIF2AK2P19525 551 aaKnown RBP19.71■□□□□ 0.75
PRPF40A-204ENST00000450303 RPS6KB1P23443 525 aa19.71■□□□□ 0.75
PRPF40A-204ENST00000450303 EPHB4P54760 987 aa19.71■□□□□ 0.75
PRPF40A-204ENST00000450303 FGD1P98174 961 aa19.71■□□□□ 0.75
PRPF40A-204ENST00000450303 NSUN6Q8TEA1 469 aaKnown RBP19.71■□□□□ 0.75
PRPF40A-204ENST00000450303 TMEM87BQ96K49 555 aa19.71■□□□□ 0.75
PRPF40A-204ENST00000450303 RMDN3Q96TC7 470 aa19.71■□□□□ 0.75
PRPF40A-204ENST00000450303 GRIN2DO15399 1336 aa19.71■□□□□ 0.75
PRPF40A-204ENST00000450303 ST18O60284 1047 aa19.7■□□□□ 0.74
PRPF40A-204ENST00000450303 CABYRO75952 493 aa19.7■□□□□ 0.74
PRPF40A-204ENST00000450303 ARIH2O95376 493 aa19.7■□□□□ 0.74
PRPF40A-204ENST00000450303 MYL3P08590 195 aa19.7■□□□□ 0.74
PRPF40A-204ENST00000450303 NEK4P51957 841 aa19.7■□□□□ 0.74
PRPF40A-204ENST00000450303 ITGA7Q13683 1181 aa19.7■□□□□ 0.74
PRPF40A-204ENST00000450303 PPP2R5BQ15173 497 aa19.7■□□□□ 0.74
PRPF40A-204ENST00000450303 ARHGEF16Q5VV41 709 aa19.7■□□□□ 0.74
PRPF40A-204ENST00000450303 NFXL1Q6ZNB6 911 aa19.7■□□□□ 0.74
PRPF40A-204ENST00000450303 SEPT14Q6ZU15 432 aa19.7■□□□□ 0.74
PRPF40A-204ENST00000450303 Q7L0L9 218 aa19.7■□□□□ 0.74
PRPF40A-204ENST00000450303 FAM126BQ8IXS8 530 aa19.7■□□□□ 0.74
PRPF40A-204ENST00000450303 ZNF654Q8IZM8 581 aa19.7■□□□□ 0.74
PRPF40A-204ENST00000450303 SCFD2Q8WU76 684 aa19.7■□□□□ 0.74
PRPF40A-204ENST00000450303 KIF2CQ99661 725 aa19.7■□□□□ 0.74
PRPF40A-204ENST00000450303 LRRC2Q9BYS8 371 aa19.7■□□□□ 0.74
PRPF40A-204ENST00000450303 PDRG1Q9NUG6 133 aa19.7■□□□□ 0.74
PRPF40A-204ENST00000450303 MROH7Q68CQ1 1323 aa19.7■□□□□ 0.74
PRPF40A-204ENST00000450303 KIAA1217Q5T5P2 1943 aa19.69■□□□□ 0.74
PRPF40A-204ENST00000450303 TLR3O15455 904 aaKnown RBP19.69■□□□□ 0.74
PRPF40A-204ENST00000450303 HOXA13P31271 388 aaPredicted RBP19.69■□□□□ 0.74
PRPF40A-204ENST00000450303 EXOSC10Q01780 885 aaKnown RBP19.69■□□□□ 0.74
PRPF40A-204ENST00000450303 RAB11FIP4Q86YS3 637 aa19.69■□□□□ 0.74
PRPF40A-204ENST00000450303 TMTC2Q8N394 836 aa19.69■□□□□ 0.74
PRPF40A-204ENST00000450303 UPF3BQ9BZI7 483 aaKnown RBP19.69■□□□□ 0.74
PRPF40A-204ENST00000450303 PPP1R12CQ9BZL4 782 aa19.69■□□□□ 0.74
PRPF40A-204ENST00000450303 MAF1Q9H063 256 aa19.69■□□□□ 0.74
PRPF40A-204ENST00000450303 TBX21Q9UL17 535 aa19.69■□□□□ 0.74
PRPF40A-204ENST00000450303 SH2B2O14492 632 aaPredicted RBP19.68■□□□□ 0.74
PRPF40A-204ENST00000450303 TIMP1P01033 207 aa19.68■□□□□ 0.74
PRPF40A-204ENST00000450303 RXRAP19793 462 aa19.68■□□□□ 0.74
PRPF40A-204ENST00000450303 HSD17B4P51659 736 aa19.68■□□□□ 0.74
PRPF40A-204ENST00000450303 FPGSQ05932 587 aa19.68■□□□□ 0.74
PRPF40A-204ENST00000450303 ANKRD1Q15327 319 aa19.68■□□□□ 0.74
PRPF40A-204ENST00000450303 STXBP2Q15833 593 aa19.68■□□□□ 0.74
PRPF40A-204ENST00000450303 LY6KQ17RY6 165 aa19.68■□□□□ 0.74
PRPF40A-204ENST00000450303 SLC43A3Q8NBI5 491 aa19.68■□□□□ 0.74
PRPF40A-204ENST00000450303 PPP1R13LQ8WUF5 828 aa19.68■□□□□ 0.74
PRPF40A-204ENST00000450303 PXMP2Q9NR77 195 aa19.68■□□□□ 0.74
PRPF40A-204ENST00000450303 PNMA6FA0A0J9YX94 578 aa19.67■□□□□ 0.74
PRPF40A-204ENST00000450303 CCDC69A6NI79 296 aa19.67■□□□□ 0.74
PRPF40A-204ENST00000450303 NKRFO15226 690 aaKnown RBP eCLIP19.67■□□□□ 0.74
PRPF40A-204ENST00000450303 CD4P01730 458 aa19.67■□□□□ 0.74
PRPF40A-204ENST00000450303 NR3C2P08235 984 aa19.67■□□□□ 0.74
PRPF40A-204ENST00000450303 MYCLP12524 364 aaPredicted RBP19.67■□□□□ 0.74
PRPF40A-204ENST00000450303 CPT1AP50416 773 aa19.67■□□□□ 0.74
PRPF40A-204ENST00000450303 TTLL4Q14679 1199 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms