RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 NKD2Q969F2 451 aaPredicted RBP9.62□□□□□ -0.87
LINC01961-201ENST00000449954 DDX11Q96FC9 970 aa9.62□□□□□ -0.87
LINC01961-201ENST00000449954 SH2D4AQ9H788 454 aa9.62□□□□□ -0.87
LINC01961-201ENST00000449954 ADAMTS5Q9UNA0 930 aa9.62□□□□□ -0.87
LINC01961-201ENST00000449954 PTPRSQ13332 1948 aa9.62□□□□□ -0.87
LINC01961-201ENST00000449954 MYH1P12882 1939 aa9.61□□□□□ -0.87
LINC01961-201ENST00000449954 WDR46O15213 610 aaKnown RBP9.61□□□□□ -0.87
LINC01961-201ENST00000449954 GJB5O95377 273 aa9.61□□□□□ -0.87
LINC01961-201ENST00000449954 WDR5P61964 334 aaKnown RBP9.61□□□□□ -0.87
LINC01961-201ENST00000449954 SEPT2Q15019 361 aa9.61□□□□□ -0.87
LINC01961-201ENST00000449954 LRRFIP1Q32MZ4 808 aaKnown RBP9.61□□□□□ -0.87
LINC01961-201ENST00000449954 TBC1D9Q6ZT07 1266 aa9.61□□□□□ -0.87
LINC01961-201ENST00000449954 EP400NLQ6ZTU2 488 aa9.61□□□□□ -0.87
LINC01961-201ENST00000449954 TTC6Q86TZ1 520 aa9.61□□□□□ -0.87
LINC01961-201ENST00000449954 WWC1Q8IX03 1113 aa9.61□□□□□ -0.87
LINC01961-201ENST00000449954 ADSSL1Q8N142 457 aa9.61□□□□□ -0.87
LINC01961-201ENST00000449954 BANK1Q8NDB2 785 aa9.61□□□□□ -0.87
LINC01961-201ENST00000449954 XAGE2Q96GT9 111 aa9.61□□□□□ -0.87
LINC01961-201ENST00000449954 SAMD11Q96NU1 681 aa9.61□□□□□ -0.87
LINC01961-201ENST00000449954 CRBNQ96SW2 442 aa9.61□□□□□ -0.87
LINC01961-201ENST00000449954 CLDND1Q9NY35 253 aa9.61□□□□□ -0.87
LINC01961-201ENST00000449954 ZNF214Q9UL59 606 aaPredicted RBP9.61□□□□□ -0.87
LINC01961-201ENST00000449954 AKAP2Q9Y2D5 859 aa9.61□□□□□ -0.87
LINC01961-201ENST00000449954 A0A1W2PRG0 241 aa9.6□□□□□ -0.87
LINC01961-201ENST00000449954 STXBP3O00186 592 aa9.6□□□□□ -0.87
LINC01961-201ENST00000449954 MBTPS2O43462 519 aa9.6□□□□□ -0.87
LINC01961-201ENST00000449954 EFCAB14O75071 495 aa9.6□□□□□ -0.87
LINC01961-201ENST00000449954 IQCF3P0C7M6 154 aa9.6□□□□□ -0.87
LINC01961-201ENST00000449954 CYP2C9P11712 490 aa9.6□□□□□ -0.87
LINC01961-201ENST00000449954 ARID4AP29374 1257 aaPredicted RBP9.6□□□□□ -0.87
LINC01961-201ENST00000449954 GUCY1A2P33402 732 aa9.6□□□□□ -0.87
LINC01961-201ENST00000449954 TNFAIP2Q03169 654 aa9.6□□□□□ -0.87
LINC01961-201ENST00000449954 SMAD4Q13485 552 aaKnown RBP9.6□□□□□ -0.87
LINC01961-201ENST00000449954 PI16Q6UXB8 463 aa9.6□□□□□ -0.87
LINC01961-201ENST00000449954 Q6ZNB5 142 aa9.6□□□□□ -0.87
LINC01961-201ENST00000449954 ARMCX2Q7L311 632 aa9.6□□□□□ -0.87
LINC01961-201ENST00000449954 RETREG2Q8NC44 543 aa9.6□□□□□ -0.87
LINC01961-201ENST00000449954 THAP11Q96EK4 314 aa9.6□□□□□ -0.87
LINC01961-201ENST00000449954 TEX13BQ9BXU2 312 aa9.6□□□□□ -0.87
LINC01961-201ENST00000449954 AP5M1Q9H0R1 490 aa9.6□□□□□ -0.87
LINC01961-201ENST00000449954 NSUN3Q9H649 340 aaKnown RBP9.6□□□□□ -0.87
LINC01961-201ENST00000449954 FAM217BQ9NTX9 383 aaPredicted RBP9.6□□□□□ -0.87
LINC01961-201ENST00000449954 TRMT13Q9NUP7 481 aaKnown RBP9.6□□□□□ -0.87
LINC01961-201ENST00000449954 ASTN1O14525 1302 aa9.59□□□□□ -0.87
LINC01961-201ENST00000449954 VWA5AO00534 786 aa9.59□□□□□ -0.87
LINC01961-201ENST00000449954 SHMT1P34896 483 aa9.59□□□□□ -0.87
LINC01961-201ENST00000449954 TIMM10P62072 90 aa9.59□□□□□ -0.87
LINC01961-201ENST00000449954 BFSP2Q13515 415 aa9.59□□□□□ -0.87
LINC01961-201ENST00000449954 PUM1Q14671 1186 aaKnown RBP eCLIP9.59□□□□□ -0.87
LINC01961-201ENST00000449954 LAPTM4AQ15012 233 aa9.59□□□□□ -0.87
LINC01961-201ENST00000449954 TCEAL5Q5H9L2 206 aa9.59□□□□□ -0.87
LINC01961-201ENST00000449954 BRICD5Q6PL45 260 aa9.59□□□□□ -0.87
LINC01961-201ENST00000449954 NOL8Q76FK4 1167 aaKnown RBP9.59□□□□□ -0.87
LINC01961-201ENST00000449954 RPAINQ86UA6 219 aa9.59□□□□□ -0.87
LINC01961-201ENST00000449954 COL26A1Q96A83 441 aa9.59□□□□□ -0.87
LINC01961-201ENST00000449954 RMDN1Q96DB5 314 aa9.59□□□□□ -0.87
LINC01961-201ENST00000449954 ASIC4Q96FT7 647 aa9.59□□□□□ -0.87
LINC01961-201ENST00000449954 USP44Q9H0E7 712 aa9.59□□□□□ -0.87
LINC01961-201ENST00000449954 VCPKMTQ9H867 229 aa9.59□□□□□ -0.87
LINC01961-201ENST00000449954 ARHGEF10LQ9HCE6 1279 aa9.59□□□□□ -0.87
LINC01961-201ENST00000449954 GNEQ9Y223 722 aaKnown RBP9.59□□□□□ -0.87
LINC01961-201ENST00000449954 MCM3APO60318 1980 aa9.58□□□□□ -0.88
LINC01961-201ENST00000449954 MPHOSPH10O00566 681 aaKnown RBP9.58□□□□□ -0.88
LINC01961-201ENST00000449954 PARNO95453 639 aaKnown RBP9.58□□□□□ -0.88
LINC01961-201ENST00000449954 MCAMP43121 646 aa9.58□□□□□ -0.88
LINC01961-201ENST00000449954 PSMC6P62333 389 aa9.58□□□□□ -0.88
LINC01961-201ENST00000449954 EXOSC9Q06265 439 aaKnown RBP9.58□□□□□ -0.88
LINC01961-201ENST00000449954 CTC1Q2NKJ3 1217 aa9.58□□□□□ -0.88
LINC01961-201ENST00000449954 KIAA1755Q5JYT7 1200 aa9.58□□□□□ -0.88
LINC01961-201ENST00000449954 GORABQ5T7V8 394 aa9.58□□□□□ -0.88
LINC01961-201ENST00000449954 TMEM179Q6ZVK1 233 aa9.58□□□□□ -0.88
LINC01961-201ENST00000449954 SPICE1Q8N0Z3 855 aa9.58□□□□□ -0.88
LINC01961-201ENST00000449954 FAM160A2Q8N612 972 aaPredicted RBP9.58□□□□□ -0.88
LINC01961-201ENST00000449954 REPS2Q8NFH8 660 aa9.58□□□□□ -0.88
LINC01961-201ENST00000449954 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.58□□□□□ -0.88
LINC01961-201ENST00000449954 REPIN1Q9BWE0 567 aaKnown RBP9.58□□□□□ -0.88
LINC01961-201ENST00000449954 KATNBL1Q9H079 304 aa9.58□□□□□ -0.88
LINC01961-201ENST00000449954 PPP1R9AQ9ULJ8 1098 aa9.58□□□□□ -0.88
LINC01961-201ENST00000449954 TMX2Q9Y320 296 aa9.58□□□□□ -0.88
LINC01961-201ENST00000449954 Q9Y3F1 56 aa9.58□□□□□ -0.88
LINC01961-201ENST00000449954 SALL2Q9Y467 1007 aaPredicted RBP9.58□□□□□ -0.88
LINC01961-201ENST00000449954 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.57□□□□□ -0.88
LINC01961-201ENST00000449954 ABHD14A-ACY1A0A1B0GW23 586 aa9.57□□□□□ -0.88
LINC01961-201ENST00000449954 LTBRP36941 435 aa9.57□□□□□ -0.88
LINC01961-201ENST00000449954 USP5P45974 858 aa9.57□□□□□ -0.88
LINC01961-201ENST00000449954 USP46P62068 366 aa9.57□□□□□ -0.88
LINC01961-201ENST00000449954 DEFB103AP81534 67 aa9.57□□□□□ -0.88
LINC01961-201ENST00000449954 CBX2Q14781 532 aaPredicted RBP9.57□□□□□ -0.88
LINC01961-201ENST00000449954 CNKSR3Q6P9H4 555 aa9.57□□□□□ -0.88
LINC01961-201ENST00000449954 RNF19BQ6ZMZ0 732 aa9.57□□□□□ -0.88
LINC01961-201ENST00000449954 LIAT1Q6ZQX7 453 aa9.57□□□□□ -0.88
LINC01961-201ENST00000449954 ADGRA1Q86SQ6 560 aa9.57□□□□□ -0.88
LINC01961-201ENST00000449954 CCDC144CPQ8IYA2 1237 aa9.57□□□□□ -0.88
LINC01961-201ENST00000449954 CCDC155Q8N6L0 562 aa9.57□□□□□ -0.88
LINC01961-201ENST00000449954 TET1Q8NFU7 2136 aa9.57□□□□□ -0.88
LINC01961-201ENST00000449954 C17orf80Q9BSJ5 609 aa9.57□□□□□ -0.88
LINC01961-201ENST00000449954 COPRSQ9NQ92 184 aa9.57□□□□□ -0.88
LINC01961-201ENST00000449954 POLR3EQ9NVU0 708 aa9.57□□□□□ -0.88
LINC01961-201ENST00000449954 FBXO40Q9UH90 709 aa9.57□□□□□ -0.88
LINC01961-201ENST00000449954 INSL6Q9Y581 213 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms