RNA–Protein interactions for RNA: ENST00000449174.1

COPS7B-213, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 668 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-213ENST00000449174 USP38Q8NB14 1042 aa13.61□□□□□ -0.23
COPS7B-213ENST00000449174 PNMA1Q8ND90 353 aa13.61□□□□□ -0.23
COPS7B-213ENST00000449174 NSUN6Q8TEA1 469 aaKnown RBP13.61□□□□□ -0.23
COPS7B-213ENST00000449174 NKX2-4Q9H2Z4 354 aa13.61□□□□□ -0.23
COPS7B-213ENST00000449174 DIAPH3Q9NSV4 1193 aa13.61□□□□□ -0.23
COPS7B-213ENST00000449174 THEGQ9P2T0 379 aa13.61□□□□□ -0.23
COPS7B-213ENST00000449174 CTNNA3Q9UI47 895 aa13.61□□□□□ -0.23
COPS7B-213ENST00000449174 GBF1Q92538 1859 aa13.61□□□□□ -0.23
COPS7B-213ENST00000449174 SCN10AQ9Y5Y9 1956 aa13.6□□□□□ -0.23
COPS7B-213ENST00000449174 ZBBXA8MT70 800 aa13.6□□□□□ -0.23
COPS7B-213ENST00000449174 ATP2A2P16615 1042 aaKnown RBP13.6□□□□□ -0.23
COPS7B-213ENST00000449174 CDC37Q16543 378 aaPredicted RBP13.6□□□□□ -0.23
COPS7B-213ENST00000449174 IMMTQ16891 758 aaKnown RBP13.6□□□□□ -0.23
COPS7B-213ENST00000449174 NBPF20Q3BBV1 942 aa13.6□□□□□ -0.23
COPS7B-213ENST00000449174 USH1GQ495M9 461 aa13.6□□□□□ -0.23
COPS7B-213ENST00000449174 FAM47CQ5HY64 1035 aa13.6□□□□□ -0.23
COPS7B-213ENST00000449174 PPP2R2DQ66LE6 453 aa13.6□□□□□ -0.23
COPS7B-213ENST00000449174 CCDC155Q8N6L0 562 aa13.6□□□□□ -0.23
COPS7B-213ENST00000449174 RETREG2Q8NC44 543 aa13.6□□□□□ -0.23
COPS7B-213ENST00000449174 PHOSPHO2Q8TCD6 241 aa13.6□□□□□ -0.23
COPS7B-213ENST00000449174 SCLYQ96I15 445 aa13.6□□□□□ -0.23
COPS7B-213ENST00000449174 IWS1Q96ST2 819 aa13.6□□□□□ -0.23
COPS7B-213ENST00000449174 ZSCAN10Q96SZ4 725 aaPredicted RBP13.6□□□□□ -0.23
COPS7B-213ENST00000449174 SLC9A7Q96T83 725 aa13.6□□□□□ -0.23
COPS7B-213ENST00000449174 DSCC1Q9BVC3 393 aa13.6□□□□□ -0.23
COPS7B-213ENST00000449174 TANC1Q9C0D5 1861 aa13.6□□□□□ -0.23
COPS7B-213ENST00000449174 TSPYL2Q9H2G4 693 aaPredicted RBP13.6□□□□□ -0.23
COPS7B-213ENST00000449174 CNNM2Q9H8M5 875 aa13.6□□□□□ -0.23
COPS7B-213ENST00000449174 YBX2Q9Y2T7 364 aaKnown RBP13.6□□□□□ -0.23
COPS7B-213ENST00000449174 KDM4AO75164 1064 aa13.59□□□□□ -0.23
COPS7B-213ENST00000449174 GOLGA8HP0CJ92 632 aa13.59□□□□□ -0.23
COPS7B-213ENST00000449174 CYP2C9P11712 490 aa13.59□□□□□ -0.23
COPS7B-213ENST00000449174 NUCB1Q02818 461 aa13.59□□□□□ -0.23
COPS7B-213ENST00000449174 STXBP2Q15833 593 aa13.59□□□□□ -0.23
COPS7B-213ENST00000449174 CWC27Q6UX04 472 aaKnown RBP13.59□□□□□ -0.23
COPS7B-213ENST00000449174 SESTD1Q86VW0 696 aa13.59□□□□□ -0.23
COPS7B-213ENST00000449174 PLEKHM2Q8IWE5 1019 aa13.59□□□□□ -0.23
COPS7B-213ENST00000449174 CAGE1Q8TC20 777 aa13.59□□□□□ -0.23
COPS7B-213ENST00000449174 ZKSCAN3Q9BRR0 538 aa13.59□□□□□ -0.23
COPS7B-213ENST00000449174 KRT23Q9C075 422 aa13.59□□□□□ -0.23
COPS7B-213ENST00000449174 UBA5Q9GZZ9 404 aa13.59□□□□□ -0.23
COPS7B-213ENST00000449174 PRDM6Q9NQX0 595 aa13.59□□□□□ -0.23
COPS7B-213ENST00000449174 NOD1Q9Y239 953 aa13.59□□□□□ -0.23
COPS7B-213ENST00000449174 MRPL11Q9Y3B7 192 aaKnown RBP13.59□□□□□ -0.23
COPS7B-213ENST00000449174 PRUNE2Q8WUY3 3088 aa13.59□□□□□ -0.23
COPS7B-213ENST00000449174 TNFRSF10AO00220 468 aa13.58□□□□□ -0.24
COPS7B-213ENST00000449174 BAIAP3O94812 1187 aa13.58□□□□□ -0.24
COPS7B-213ENST00000449174 PARNO95453 639 aaKnown RBP13.58□□□□□ -0.24
COPS7B-213ENST00000449174 GH1P01241 217 aa13.58□□□□□ -0.24
COPS7B-213ENST00000449174 PARP1P09874 1014 aaKnown RBP13.58□□□□□ -0.24
COPS7B-213ENST00000449174 IQCF3P0C7M6 154 aa13.58□□□□□ -0.24
COPS7B-213ENST00000449174 IGFBP4P22692 258 aa13.58□□□□□ -0.24
COPS7B-213ENST00000449174 ADGRE1Q14246 886 aa13.58□□□□□ -0.24
COPS7B-213ENST00000449174 TMEM67Q5HYA8 995 aa13.58□□□□□ -0.24
COPS7B-213ENST00000449174 B4GALNT3Q6L9W6 998 aa13.58□□□□□ -0.24
COPS7B-213ENST00000449174 CCDC62Q6P9F0 684 aa13.58□□□□□ -0.24
COPS7B-213ENST00000449174 ADGRF4Q8IZF3 695 aa13.58□□□□□ -0.24
COPS7B-213ENST00000449174 SAMD3Q8N6K7 520 aa13.58□□□□□ -0.24
COPS7B-213ENST00000449174 VWCEQ96DN2 955 aa13.58□□□□□ -0.24
COPS7B-213ENST00000449174 ASB2Q96Q27 587 aa13.58□□□□□ -0.24
COPS7B-213ENST00000449174 UBAC1Q9BSL1 405 aa13.58□□□□□ -0.24
COPS7B-213ENST00000449174 MAP3K20Q9NYL2 800 aaKnown RBP13.58□□□□□ -0.24
COPS7B-213ENST00000449174 B4E1Z4 1266 aa13.57□□□□□ -0.24
COPS7B-213ENST00000449174 KIF28PB7ZC32 967 aa13.57□□□□□ -0.24
COPS7B-213ENST00000449174 MMP3P08254 477 aa13.57□□□□□ -0.24
COPS7B-213ENST00000449174 CASTP20810 708 aaKnown RBP13.57□□□□□ -0.24
COPS7B-213ENST00000449174 RABGGTBP53611 331 aa13.57□□□□□ -0.24
COPS7B-213ENST00000449174 MRPS5P82675 430 aaKnown RBP13.57□□□□□ -0.24
COPS7B-213ENST00000449174 TRAF1Q13077 416 aa13.57□□□□□ -0.24
COPS7B-213ENST00000449174 DEFB128Q7Z7B8 93 aa13.57□□□□□ -0.24
COPS7B-213ENST00000449174 FBXO11Q86XK2 927 aa13.57□□□□□ -0.24
COPS7B-213ENST00000449174 ENAHQ8N8S7 591 aaPredicted RBP13.57□□□□□ -0.24
COPS7B-213ENST00000449174 IL27Q8NEV9 243 aa13.57□□□□□ -0.24
COPS7B-213ENST00000449174 SYTL5Q8TDW5 730 aaPredicted RBP13.57□□□□□ -0.24
COPS7B-213ENST00000449174 AFAP1L1Q8TED9 768 aa13.57□□□□□ -0.24
COPS7B-213ENST00000449174 PPM1EQ8WY54 764 aa13.57□□□□□ -0.24
COPS7B-213ENST00000449174 COPS5Q92905 334 aa13.57□□□□□ -0.24
COPS7B-213ENST00000449174 EMID1Q96A84 441 aaPredicted RBP13.57□□□□□ -0.24
COPS7B-213ENST00000449174 RMDN3Q96TC7 470 aa13.57□□□□□ -0.24
COPS7B-213ENST00000449174 KATNAL1Q9BW62 490 aa13.57□□□□□ -0.24
COPS7B-213ENST00000449174 CHD9Q3L8U1 2897 aa13.57□□□□□ -0.24
COPS7B-213ENST00000449174 DHX16O60231 1041 aaKnown RBP13.56□□□□□ -0.24
COPS7B-213ENST00000449174 EIF3JO75822 258 aaKnown RBP13.56□□□□□ -0.24
COPS7B-213ENST00000449174 ARIH2O95376 493 aa13.56□□□□□ -0.24
COPS7B-213ENST00000449174 POU3F3P20264 500 aaPredicted RBP13.56□□□□□ -0.24
COPS7B-213ENST00000449174 ARHGAP1Q07960 439 aa13.56□□□□□ -0.24
COPS7B-213ENST00000449174 PTGISQ16647 500 aa13.56□□□□□ -0.24
COPS7B-213ENST00000449174 DGKDQ16760 1214 aa13.56□□□□□ -0.24
COPS7B-213ENST00000449174 QRICH1Q2TAL8 776 aa13.56□□□□□ -0.24
COPS7B-213ENST00000449174 ARHGEF16Q5VV41 709 aa13.56□□□□□ -0.24
COPS7B-213ENST00000449174 KCNV1Q6PIU1 500 aa13.56□□□□□ -0.24
COPS7B-213ENST00000449174 SEPT14Q6ZU15 432 aa13.56□□□□□ -0.24
COPS7B-213ENST00000449174 AFG1LQ8WV93 481 aa13.56□□□□□ -0.24
COPS7B-213ENST00000449174 TAAR1Q96RJ0 339 aa13.56□□□□□ -0.24
COPS7B-213ENST00000449174 AMNQ9BXJ7 453 aa13.56□□□□□ -0.24
COPS7B-213ENST00000449174 CPVLQ9H3G5 476 aa13.56□□□□□ -0.24
COPS7B-213ENST00000449174 ZSWIM5Q9P217 1185 aa13.56□□□□□ -0.24
COPS7B-213ENST00000449174 VCANP13611 3396 aa13.56□□□□□ -0.24
COPS7B-213ENST00000449174 SPTBN5Q9NRC6 3674 aaKnown RBP13.56□□□□□ -0.24
COPS7B-213ENST00000449174 KIAA1217Q5T5P2 1943 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms