RNA–Protein interactions for RNA: ENST00000448872.6

RCL1-208, Transcript of RNA terminal phosphate cyclase like 1, humanhuman

TSL 1 (best) BASIC

Gene RCL1, Length 1,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1-208ENST00000448872 KIF3AQ9Y496 699 aa13.58□□□□□ -0.24
RCL1-208ENST00000448872 BAZ2BQ9UIF8 2168 aaKnown RBP13.58□□□□□ -0.24
RCL1-208ENST00000448872 RGS2P41220 211 aa13.57□□□□□ -0.24
RCL1-208ENST00000448872 VASPP50552 380 aaPredicted RBP13.57□□□□□ -0.24
RCL1-208ENST00000448872 GALNT17Q6IS24 598 aa13.57□□□□□ -0.24
RCL1-208ENST00000448872 BICD2Q8TD16 824 aa13.57□□□□□ -0.24
RCL1-208ENST00000448872 MAML3Q96JK9 1138 aa13.57□□□□□ -0.24
RCL1-208ENST00000448872 APBA2Q99767 749 aa13.57□□□□□ -0.24
RCL1-208ENST00000448872 ANO3Q9BYT9 981 aa13.57□□□□□ -0.24
RCL1-208ENST00000448872 PXMP2Q9NR77 195 aa13.57□□□□□ -0.24
RCL1-208ENST00000448872 MTMR6Q9Y217 621 aa13.57□□□□□ -0.24
RCL1-208ENST00000448872 COL11A1P12107 1806 aaPredicted RBP13.57□□□□□ -0.24
RCL1-208ENST00000448872 ZSWIM8A7E2V4 1837 aa13.56□□□□□ -0.24
RCL1-208ENST00000448872 SPDYE3A6NKU9 549 aa13.56□□□□□ -0.24
RCL1-208ENST00000448872 HOXC6P09630 235 aa13.56□□□□□ -0.24
RCL1-208ENST00000448872 ELNP15502 786 aa13.56□□□□□ -0.24
RCL1-208ENST00000448872 HOXD10P28358 340 aa13.56□□□□□ -0.24
RCL1-208ENST00000448872 ALDH5A1P51649 535 aaPredicted RBP13.56□□□□□ -0.24
RCL1-208ENST00000448872 FOXD4L5Q5VV16 416 aaPredicted RBP13.56□□□□□ -0.24
RCL1-208ENST00000448872 ARHGEF16Q5VV41 709 aa13.56□□□□□ -0.24
RCL1-208ENST00000448872 MCTP1Q6DN14 999 aa13.56□□□□□ -0.24
RCL1-208ENST00000448872 PIK3AP1Q6ZUJ8 805 aa13.56□□□□□ -0.24
RCL1-208ENST00000448872 FERMT3Q86UX7 667 aa13.56□□□□□ -0.24
RCL1-208ENST00000448872 FAM177A1Q8N128 213 aaPredicted RBP13.56□□□□□ -0.24
RCL1-208ENST00000448872 FOXD4L4Q8WXT5 416 aaPredicted RBP13.56□□□□□ -0.24
RCL1-208ENST00000448872 GLT8D2Q9H1C3 349 aa13.56□□□□□ -0.24
RCL1-208ENST00000448872 MAP3K20Q9NYL2 800 aaKnown RBP13.56□□□□□ -0.24
RCL1-208ENST00000448872 PTCH2Q9Y6C5 1203 aa13.56□□□□□ -0.24
RCL1-208ENST00000448872 RPTORQ8N122 1335 aa13.56□□□□□ -0.24
RCL1-208ENST00000448872 STX6O43752 255 aa13.55□□□□□ -0.24
RCL1-208ENST00000448872 EDIL3O43854 480 aa13.55□□□□□ -0.24
RCL1-208ENST00000448872 GNRH1P01148 92 aa13.55□□□□□ -0.24
RCL1-208ENST00000448872 PDCP20941 246 aa13.55□□□□□ -0.24
RCL1-208ENST00000448872 TRIM32Q13049 653 aa13.55□□□□□ -0.24
RCL1-208ENST00000448872 AP3B2Q13367 1082 aa13.55□□□□□ -0.24
RCL1-208ENST00000448872 SAFBQ15424 915 aaKnown RBP eCLIP13.55□□□□□ -0.24
RCL1-208ENST00000448872 SAMD3Q8N6K7 520 aa13.55□□□□□ -0.24
RCL1-208ENST00000448872 NSUN6Q8TEA1 469 aaKnown RBP13.55□□□□□ -0.24
RCL1-208ENST00000448872 TRIB2Q92519 343 aa13.55□□□□□ -0.24
RCL1-208ENST00000448872 PDCD2LQ9BRP1 358 aa13.55□□□□□ -0.24
RCL1-208ENST00000448872 BRMS1Q9HCU9 246 aa13.55□□□□□ -0.24
RCL1-208ENST00000448872 DAXXQ9UER7 740 aaPredicted RBP13.55□□□□□ -0.24
RCL1-208ENST00000448872 IGHA2P01877 340 aa13.55□□□□□ -0.24
RCL1-208ENST00000448872 MYCLP12524 364 aaPredicted RBP13.55□□□□□ -0.24
RCL1-208ENST00000448872 XRCC5P13010 732 aaKnown RBP13.55□□□□□ -0.24
RCL1-208ENST00000448872 CYP2C19P33261 490 aa13.55□□□□□ -0.24
RCL1-208ENST00000448872 DDIT3P35638 169 aa13.55□□□□□ -0.24
RCL1-208ENST00000448872 ARHGEF6Q15052 776 aa13.55□□□□□ -0.24
RCL1-208ENST00000448872 PGM5Q15124 567 aa13.55□□□□□ -0.24
RCL1-208ENST00000448872 INF2Q27J81 1249 aa13.55□□□□□ -0.24
RCL1-208ENST00000448872 ARMCX2Q7L311 632 aa13.55□□□□□ -0.24
RCL1-208ENST00000448872 EEPD1Q7L9B9 569 aa13.55□□□□□ -0.24
RCL1-208ENST00000448872 DNERQ8NFT8 737 aa13.55□□□□□ -0.24
RCL1-208ENST00000448872 RAET1EQ8TD07 263 aa13.55□□□□□ -0.24
RCL1-208ENST00000448872 TBCKQ8TEA7 893 aa13.55□□□□□ -0.24
RCL1-208ENST00000448872 IPO9Q96P70 1041 aaKnown RBP13.55□□□□□ -0.24
RCL1-208ENST00000448872 MAF1Q9H063 256 aa13.55□□□□□ -0.24
RCL1-208ENST00000448872 DIS3Q9Y2L1 958 aaKnown RBP13.55□□□□□ -0.24
RCL1-208ENST00000448872 PTPN22Q9Y2R2 807 aa13.55□□□□□ -0.24
RCL1-208ENST00000448872 FRMPD4Q14CM0 1322 aa13.54□□□□□ -0.24
RCL1-208ENST00000448872 CCDC194A0A1B0GVG4 234 aa13.54□□□□□ -0.24
RCL1-208ENST00000448872 WNT7AO00755 349 aa13.54□□□□□ -0.24
RCL1-208ENST00000448872 SNAI1O95863 264 aaPredicted RBP13.54□□□□□ -0.24
RCL1-208ENST00000448872 FOSP01100 380 aaPredicted RBP13.54□□□□□ -0.24
RCL1-208ENST00000448872 NR3C2P08235 984 aa13.54□□□□□ -0.24
RCL1-208ENST00000448872 EDNRBP24530 442 aa13.54□□□□□ -0.24
RCL1-208ENST00000448872 U2AF2P26368 475 aaKnown RBP eCLIP13.54□□□□□ -0.24
RCL1-208ENST00000448872 SREBF1P36956 1147 aa13.54□□□□□ -0.24
RCL1-208ENST00000448872 MRPS9P82933 396 aaKnown RBP13.54□□□□□ -0.24
RCL1-208ENST00000448872 ARHGAP4P98171 946 aa13.54□□□□□ -0.24
RCL1-208ENST00000448872 IRF5Q13568 498 aa13.54□□□□□ -0.24
RCL1-208ENST00000448872 GNL2Q13823 731 aaKnown RBP13.54□□□□□ -0.24
RCL1-208ENST00000448872 PRAMEF19Q5SWL8 479 aa13.54□□□□□ -0.24
RCL1-208ENST00000448872 KRT25Q7Z3Z0 450 aa13.54□□□□□ -0.24
RCL1-208ENST00000448872 CTU1Q7Z7A3 348 aaKnown RBP13.54□□□□□ -0.24
RCL1-208ENST00000448872 ZNF467Q7Z7K2 595 aaPredicted RBP13.54□□□□□ -0.24
RCL1-208ENST00000448872 NOSTRINQ8IVI9 506 aa13.54□□□□□ -0.24
RCL1-208ENST00000448872 CRYGNQ8WXF5 182 aa13.54□□□□□ -0.24
RCL1-208ENST00000448872 TINF2Q9BSI4 451 aa13.54□□□□□ -0.24
RCL1-208ENST00000448872 FOXP1Q9H334 677 aaPredicted RBP13.54□□□□□ -0.24
RCL1-208ENST00000448872 SLC5A4Q9NY91 659 aa13.54□□□□□ -0.24
RCL1-208ENST00000448872 RTEL1Q9NZ71 1219 aa13.54□□□□□ -0.24
RCL1-208ENST00000448872 ADD3Q9UEY8 706 aaKnown RBP13.54□□□□□ -0.24
RCL1-208ENST00000448872 ZDHHC9Q9Y397 364 aa13.54□□□□□ -0.24
RCL1-208ENST00000448872 ADCY3O60266 1144 aa13.53□□□□□ -0.24
RCL1-208ENST00000448872 PDE4DQ08499 809 aa13.53□□□□□ -0.24
RCL1-208ENST00000448872 RESTQ13127 1097 aa13.53□□□□□ -0.24
RCL1-208ENST00000448872 NONOQ15233 471 aaKnown RBP eCLIP13.53□□□□□ -0.24
RCL1-208ENST00000448872 OLFML2BQ68BL8 750 aa13.53□□□□□ -0.24
RCL1-208ENST00000448872 FAM173BQ6P4H8 233 aa13.53□□□□□ -0.24
RCL1-208ENST00000448872 MAMDC4Q6UXC1 1216 aa13.53□□□□□ -0.24
RCL1-208ENST00000448872 VSIG10LQ86VR7 867 aa13.53□□□□□ -0.24
RCL1-208ENST00000448872 FBXO16Q8IX29 292 aaPredicted RBP13.53□□□□□ -0.24
RCL1-208ENST00000448872 CYP2W1Q8TAV3 490 aa13.53□□□□□ -0.24
RCL1-208ENST00000448872 MORC4Q8TE76 937 aa13.53□□□□□ -0.24
RCL1-208ENST00000448872 SH3TC2Q8TF17 1288 aa13.53□□□□□ -0.24
RCL1-208ENST00000448872 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.53□□□□□ -0.24
RCL1-208ENST00000448872 CENPFP49454 3210 aa13.53□□□□□ -0.24
RCL1-208ENST00000448872 ASB14A6NK59 587 aa13.52□□□□□ -0.25
RCL1-208ENST00000448872 RGS20O76081 388 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms