RNA–Protein interactions for RNA: ENST00000448223.6

SMC6-207, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,233 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-207ENST00000448223 DAB1O75553 588 aa10.06□□□□□ -0.8
SMC6-207ENST00000448223 GRAMD1BQ3KR37 738 aa10.06□□□□□ -0.8
SMC6-207ENST00000448223 DHX40Q8IX18 779 aaKnown RBP10.06□□□□□ -0.8
SMC6-207ENST00000448223 CCDC89Q8N998 374 aa10.06□□□□□ -0.8
SMC6-207ENST00000448223 MSANTD4Q8NCY6 345 aa10.06□□□□□ -0.8
SMC6-207ENST00000448223 KCNV2Q8TDN2 545 aa10.06□□□□□ -0.8
SMC6-207ENST00000448223 SDR42E1Q8WUS8 393 aa10.06□□□□□ -0.8
SMC6-207ENST00000448223 TPP2P29144 1249 aaPredicted RBP10.05□□□□□ -0.8
SMC6-207ENST00000448223 PPP2R5EQ16537 467 aa10.05□□□□□ -0.8
SMC6-207ENST00000448223 C6orf118Q5T5N4 469 aa10.05□□□□□ -0.8
SMC6-207ENST00000448223 IQUBQ8NA54 791 aa10.05□□□□□ -0.8
SMC6-207ENST00000448223 ZNF653Q96CK0 615 aa10.05□□□□□ -0.8
SMC6-207ENST00000448223 VPS37BQ9H9H4 285 aa10.05□□□□□ -0.8
SMC6-207ENST00000448223 INTUQ9ULD6 942 aa10.05□□□□□ -0.8
SMC6-207ENST00000448223 ASAP1Q9ULH1 1129 aa10.05□□□□□ -0.8
SMC6-207ENST00000448223 E9PMD0 336 aa10.05□□□□□ -0.8
SMC6-207ENST00000448223 KRT14P02533 472 aa10.05□□□□□ -0.8
SMC6-207ENST00000448223 KRT8P05787 483 aa10.05□□□□□ -0.8
SMC6-207ENST00000448223 PDIA6Q15084 440 aa10.05□□□□□ -0.8
SMC6-207ENST00000448223 SYCE1Q8N0S2 351 aa10.05□□□□□ -0.8
SMC6-207ENST00000448223 FLCNQ8NFG4 579 aa10.05□□□□□ -0.8
SMC6-207ENST00000448223 ZNF274Q96GC6 653 aaPredicted RBP10.05□□□□□ -0.8
SMC6-207ENST00000448223 IFIH1Q9BYX4 1025 aaKnown RBP10.05□□□□□ -0.8
SMC6-207ENST00000448223 IRX2Q9BZI1 471 aaPredicted RBP10.05□□□□□ -0.8
SMC6-207ENST00000448223 HAUS4Q9H6D7 363 aa10.05□□□□□ -0.8
SMC6-207ENST00000448223 KIF9Q9HAQ2 790 aa10.05□□□□□ -0.8
SMC6-207ENST00000448223 TMOD2Q9NZR1 351 aa10.05□□□□□ -0.8
SMC6-207ENST00000448223 V9GY48 417 aaPredicted RBP10.05□□□□□ -0.8
SMC6-207ENST00000448223 BAZ2BQ9UIF8 2168 aaKnown RBP10.05□□□□□ -0.8
SMC6-207ENST00000448223 ERBB3P21860 1342 aa10.05□□□□□ -0.8
SMC6-207ENST00000448223 WBP4O75554 376 aaKnown RBP10.05□□□□□ -0.8
SMC6-207ENST00000448223 ADAMTS2O95450 1211 aa10.05□□□□□ -0.8
SMC6-207ENST00000448223 TBC1D8O95759 1140 aa10.05□□□□□ -0.8
SMC6-207ENST00000448223 ALS2CLQ60I27 953 aa10.05□□□□□ -0.8
SMC6-207ENST00000448223 LRRN4CLQ8ND94 238 aa10.05□□□□□ -0.8
SMC6-207ENST00000448223 SNRNP27Q8WVK2 155 aaKnown RBP10.05□□□□□ -0.8
SMC6-207ENST00000448223 PPWD1Q96BP3 646 aaKnown RBP10.05□□□□□ -0.8
SMC6-207ENST00000448223 CEP19Q96LK0 163 aa10.05□□□□□ -0.8
SMC6-207ENST00000448223 SCHIP1Q9P0W5 487 aaPredicted RBP10.05□□□□□ -0.8
SMC6-207ENST00000448223 EPS15L1Q9UBC2 864 aa10.05□□□□□ -0.8
SMC6-207ENST00000448223 PACSIN2Q9UNF0 486 aaPredicted RBP10.05□□□□□ -0.8
SMC6-207ENST00000448223 CTNND2Q9UQB3 1225 aa10.05□□□□□ -0.8
SMC6-207ENST00000448223 MED23Q9ULK4 1368 aa10.05□□□□□ -0.8
SMC6-207ENST00000448223 IGHMBP2P38935 993 aaKnown RBP10.05□□□□□ -0.8
SMC6-207ENST00000448223 GUCY2DQ02846 1103 aa10.05□□□□□ -0.8
SMC6-207ENST00000448223 FBXW10Q5XX13 1052 aa10.05□□□□□ -0.8
SMC6-207ENST00000448223 PEX26Q7Z412 305 aa10.05□□□□□ -0.8
SMC6-207ENST00000448223 SPC25Q9HBM1 224 aa10.05□□□□□ -0.8
SMC6-207ENST00000448223 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.04□□□□□ -0.8
SMC6-207ENST00000448223 CAND2O75155 1236 aa10.04□□□□□ -0.8
SMC6-207ENST00000448223 ZRANB2O95218 330 aaKnown RBP eCLIP10.04□□□□□ -0.81e-8■■■■■ 54.5
SMC6-207ENST00000448223 GNAT2P19087 354 aa10.04□□□□□ -0.8
SMC6-207ENST00000448223 TRPC1P48995 793 aa10.04□□□□□ -0.8
SMC6-207ENST00000448223 CYLC2Q14093 348 aaPredicted RBP10.04□□□□□ -0.8
SMC6-207ENST00000448223 RCN2Q14257 317 aa10.04□□□□□ -0.8
SMC6-207ENST00000448223 OLFML2BQ68BL8 750 aa10.04□□□□□ -0.8
SMC6-207ENST00000448223 PPP4R3AQ6IN85 833 aa10.04□□□□□ -0.8
SMC6-207ENST00000448223 RSBN1LQ6PCB5 846 aaPredicted RBP10.04□□□□□ -0.8
SMC6-207ENST00000448223 HEATR3Q7Z4Q2 680 aa10.04□□□□□ -0.8
SMC6-207ENST00000448223 MPHOSPH6Q99547 160 aaKnown RBP10.04□□□□□ -0.8
SMC6-207ENST00000448223 SAMSN1Q9NSI8 373 aaKnown RBP10.04□□□□□ -0.8
SMC6-207ENST00000448223 SYNRGQ9UMZ2 1314 aa10.04□□□□□ -0.8
SMC6-207ENST00000448223 NBPF26B4DH59 902 aa10.04□□□□□ -0.8
SMC6-207ENST00000448223 KIF23Q02241 960 aaPredicted RBP10.04□□□□□ -0.8
SMC6-207ENST00000448223 ARMCX5Q6P1M9 558 aa10.04□□□□□ -0.8
SMC6-207ENST00000448223 NBPF15Q8N660 670 aa10.04□□□□□ -0.8
SMC6-207ENST00000448223 CASP10Q92851 521 aa10.04□□□□□ -0.8
SMC6-207ENST00000448223 EFHD1Q9BUP0 239 aa10.04□□□□□ -0.8
SMC6-207ENST00000448223 ABCB6Q9NP58 842 aa10.04□□□□□ -0.8
SMC6-207ENST00000448223 RTEL1Q9NZ71 1219 aa10.04□□□□□ -0.8
SMC6-207ENST00000448223 CEMIPQ8WUJ3 1361 aa10.04□□□□□ -0.8
SMC6-207ENST00000448223 TTC4O95801 387 aa10.04□□□□□ -0.8
SMC6-207ENST00000448223 MCF2P10911 925 aa10.04□□□□□ -0.8
SMC6-207ENST00000448223 SLC5A1P13866 664 aa10.04□□□□□ -0.8
SMC6-207ENST00000448223 FMR1NBQ8N0W7 255 aaPredicted RBP10.04□□□□□ -0.8
SMC6-207ENST00000448223 FNBP4Q8N3X1 1017 aaPredicted RBP10.04□□□□□ -0.8
SMC6-207ENST00000448223 LRGUKQ96M69 825 aa10.04□□□□□ -0.8
SMC6-207ENST00000448223 FDPSP14324 419 aaKnown RBP10.04□□□□□ -0.8
SMC6-207ENST00000448223 PPP1R2P41236 205 aa10.04□□□□□ -0.8
SMC6-207ENST00000448223 PDCLQ13371 301 aa10.04□□□□□ -0.8
SMC6-207ENST00000448223 TMTC3Q6ZXV5 915 aa10.04□□□□□ -0.8
SMC6-207ENST00000448223 ZNF287Q9HBT7 754 aa10.04□□□□□ -0.8
SMC6-207ENST00000448223 SARM1Q6SZW1 724 aa10.03□□□□□ -0.8
SMC6-207ENST00000448223 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.03□□□□□ -0.8
SMC6-207ENST00000448223 CYTH2Q99418 400 aa10.03□□□□□ -0.8
SMC6-207ENST00000448223 TBC1D23Q9NUY8 699 aa10.03□□□□□ -0.8
SMC6-207ENST00000448223 BIN2Q9UBW5 565 aaPredicted RBP10.03□□□□□ -0.8
SMC6-207ENST00000448223 TRPC5Q9UL62 973 aaPredicted RBP10.03□□□□□ -0.8
SMC6-207ENST00000448223 STX10O60499 249 aa10.03□□□□□ -0.8
SMC6-207ENST00000448223 SPAG7O75391 227 aa10.03□□□□□ -0.8
SMC6-207ENST00000448223 CNGA1P29973 690 aa10.03□□□□□ -0.8
SMC6-207ENST00000448223 CCDC80Q76M96 950 aa10.03□□□□□ -0.8
SMC6-207ENST00000448223 PAWRQ96IZ0 340 aaKnown RBP10.03□□□□□ -0.8
SMC6-207ENST00000448223 COQ7Q99807 217 aa10.03□□□□□ -0.8
SMC6-207ENST00000448223 AKAP12Q02952 1782 aa10.03□□□□□ -0.8
SMC6-207ENST00000448223 CYP2D7A0A087X1C5 515 aa10.03□□□□□ -0.8
SMC6-207ENST00000448223 KRIT1O00522 736 aa10.03□□□□□ -0.8
SMC6-207ENST00000448223 SH3BP5O60239 455 aa10.03□□□□□ -0.8
SMC6-207ENST00000448223 APOA5Q6Q788 366 aa10.03□□□□□ -0.8
SMC6-207ENST00000448223 HIC2Q96JB3 615 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms