RNA–Protein interactions for RNA: ENST00000448136.5

SNHG16-201, Transcript of small nucleolar RNA host gene 16, humanhuman

TSL 1 (best) BASIC

Gene SNHG16, Length 3,607 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG16-201ENST00000448136 KLHDC7AQ5VTJ3 777 aa11.14□□□□□ -0.63
SNHG16-201ENST00000448136 KANK3Q6NY19 840 aa11.14□□□□□ -0.63
SNHG16-201ENST00000448136 TRIM22Q8IYM9 498 aa11.14□□□□□ -0.63
SNHG16-201ENST00000448136 C4orf32Q8N8J7 132 aa11.14□□□□□ -0.63
SNHG16-201ENST00000448136 LPIN2Q92539 896 aa11.14□□□□□ -0.63
SNHG16-201ENST00000448136 TUBGCP2Q9BSJ2 902 aa11.14□□□□□ -0.63
SNHG16-201ENST00000448136 LEMD3Q9Y2U8 911 aa11.14□□□□□ -0.63
SNHG16-201ENST00000448136 PDS5AQ29RF7 1337 aaKnown RBP11.14□□□□□ -0.63
SNHG16-201ENST00000448136 SLIT3O75094 1523 aa11.14□□□□□ -0.63
SNHG16-201ENST00000448136 TUBBP07437 444 aa11.14□□□□□ -0.63
SNHG16-201ENST00000448136 ATP2C1P98194 919 aaPredicted RBP11.14□□□□□ -0.63
SNHG16-201ENST00000448136 ITGB3BPQ13352 177 aaPredicted RBP11.14□□□□□ -0.63
SNHG16-201ENST00000448136 UAP1Q16222 522 aaPredicted RBP11.14□□□□□ -0.63
SNHG16-201ENST00000448136 CAMTA1Q9Y6Y1 1673 aa11.14□□□□□ -0.63
SNHG16-201ENST00000448136 AKR1B10O60218 316 aa11.14□□□□□ -0.63
SNHG16-201ENST00000448136 BUB1BO60566 1050 aaPredicted RBP11.14□□□□□ -0.63
SNHG16-201ENST00000448136 ECHS1P30084 290 aa11.14□□□□□ -0.63
SNHG16-201ENST00000448136 VAV2P52735 878 aa11.14□□□□□ -0.63
SNHG16-201ENST00000448136 DDR1Q08345 913 aa11.14□□□□□ -0.63
SNHG16-201ENST00000448136 IFNL2Q8IZJ0 200 aa11.14□□□□□ -0.63
SNHG16-201ENST00000448136 SH2D4AQ9H788 454 aa11.14□□□□□ -0.63
SNHG16-201ENST00000448136 MMRN2Q9H8L6 949 aa11.14□□□□□ -0.63
SNHG16-201ENST00000448136 PCDHA13Q9Y5I0 950 aa11.14□□□□□ -0.63
SNHG16-201ENST00000448136 PHRF1Q9P1Y6 1649 aaKnown RBP11.14□□□□□ -0.63
SNHG16-201ENST00000448136 A8MUI8 341 aa11.13□□□□□ -0.63
SNHG16-201ENST00000448136 SRGNP10124 158 aa11.13□□□□□ -0.63
SNHG16-201ENST00000448136 EPB41P11171 864 aaKnown RBP11.13□□□□□ -0.63
SNHG16-201ENST00000448136 EIF4A3P38919 411 aaKnown RBP11.13□□□□□ -0.63
SNHG16-201ENST00000448136 SCTRP47872 440 aa11.13□□□□□ -0.63
SNHG16-201ENST00000448136 EPHB4P54760 987 aa11.13□□□□□ -0.63
SNHG16-201ENST00000448136 PACSIN1Q9BY11 444 aa11.13□□□□□ -0.63
SNHG16-201ENST00000448136 ZNHIT6Q9NWK9 470 aaKnown RBP11.13□□□□□ -0.63
SNHG16-201ENST00000448136 KIF13AQ9H1H9 1805 aa11.13□□□□□ -0.63
SNHG16-201ENST00000448136 KRT2P35908 639 aa11.13□□□□□ -0.63
SNHG16-201ENST00000448136 SLC1A4P43007 532 aa11.13□□□□□ -0.63
SNHG16-201ENST00000448136 SPA17Q15506 151 aa11.13□□□□□ -0.63
SNHG16-201ENST00000448136 KIF2BQ8N4N8 673 aa11.13□□□□□ -0.63
SNHG16-201ENST00000448136 GPKOWQ92917 476 aaPredicted RBP eCLIP11.13□□□□□ -0.631e-6■■■■□ 25
SNHG16-201ENST00000448136 ISCA1Q9BUE6 129 aa11.13□□□□□ -0.63
SNHG16-201ENST00000448136 AP1M1Q9BXS5 423 aa11.13□□□□□ -0.63
SNHG16-201ENST00000448136 NLRC4Q9NPP4 1024 aa11.13□□□□□ -0.63
SNHG16-201ENST00000448136 NOVA2Q9UNW9 492 aaKnown RBP11.13□□□□□ -0.63
SNHG16-201ENST00000448136 ANKRD18BA2A2Z9 1011 aa11.13□□□□□ -0.63
SNHG16-201ENST00000448136 MTIF2P46199 727 aaKnown RBP11.13□□□□□ -0.63
SNHG16-201ENST00000448136 EHHADHQ08426 723 aa11.13□□□□□ -0.63
SNHG16-201ENST00000448136 UBE3CQ15386 1083 aa11.13□□□□□ -0.63
SNHG16-201ENST00000448136 ADAT2Q7Z6V5 191 aaKnown RBP11.13□□□□□ -0.63
SNHG16-201ENST00000448136 CPLX4Q7Z7G2 160 aa11.13□□□□□ -0.63
SNHG16-201ENST00000448136 BCORQ6W2J9 1755 aa11.12□□□□□ -0.63
SNHG16-201ENST00000448136 C21orf2O43822 256 aa11.12□□□□□ -0.63
SNHG16-201ENST00000448136 ATRNO75882 1429 aa11.12□□□□□ -0.63
SNHG16-201ENST00000448136 CSF1RP07333 972 aa11.12□□□□□ -0.63
SNHG16-201ENST00000448136 BCAMP50895 628 aa11.12□□□□□ -0.63
SNHG16-201ENST00000448136 KRT83P78385 493 aa11.12□□□□□ -0.63
SNHG16-201ENST00000448136 IFIT5Q13325 482 aaKnown RBP11.12□□□□□ -0.63
SNHG16-201ENST00000448136 SPICE1Q8N0Z3 855 aa11.12□□□□□ -0.63
SNHG16-201ENST00000448136 UBLCP1Q8WVY7 318 aaPredicted RBP11.12□□□□□ -0.63
SNHG16-201ENST00000448136 ALS2Q96Q42 1657 aa11.12□□□□□ -0.63
SNHG16-201ENST00000448136 MYH1P12882 1939 aa11.12□□□□□ -0.63
SNHG16-201ENST00000448136 TLDC2A0PJX2 215 aa11.12□□□□□ -0.63
SNHG16-201ENST00000448136 CYLC1P35663 651 aaPredicted RBP11.12□□□□□ -0.63
SNHG16-201ENST00000448136 IFNAR2P48551 515 aa11.12□□□□□ -0.63
SNHG16-201ENST00000448136 ANKRD20A8PQ5CZ79 823 aa11.12□□□□□ -0.63
SNHG16-201ENST00000448136 MICALCLQ6ZW33 695 aa11.12□□□□□ -0.63
SNHG16-201ENST00000448136 SEC16BQ96JE7 1060 aa11.12□□□□□ -0.63
SNHG16-201ENST00000448136 GTPBP6O43824 516 aaPredicted RBP11.11□□□□□ -0.63
SNHG16-201ENST00000448136 FAM107AO95990 144 aa11.11□□□□□ -0.63
SNHG16-201ENST00000448136 SLC35G1Q2M3R5 365 aa11.11□□□□□ -0.63
SNHG16-201ENST00000448136 MSL1Q68DK7 614 aa11.11□□□□□ -0.63
SNHG16-201ENST00000448136 KDM7AQ6ZMT4 941 aa11.11□□□□□ -0.63
SNHG16-201ENST00000448136 RRAGAQ7L523 313 aa11.11□□□□□ -0.63
SNHG16-201ENST00000448136 ANKLE2Q86XL3 938 aa11.11□□□□□ -0.63
SNHG16-201ENST00000448136 CSGALNACT2Q8N6G5 542 aa11.11□□□□□ -0.63
SNHG16-201ENST00000448136 HVCN1Q96D96 273 aa11.11□□□□□ -0.63
SNHG16-201ENST00000448136 NOD2Q9HC29 1040 aa11.11□□□□□ -0.63
SNHG16-201ENST00000448136 TBC1D2BQ9UPU7 963 aa11.11□□□□□ -0.63
SNHG16-201ENST00000448136 STK38LQ9Y2H1 464 aa11.11□□□□□ -0.63
SNHG16-201ENST00000448136 CD2APQ9Y5K6 639 aa11.11□□□□□ -0.63
SNHG16-201ENST00000448136 LRRC53A6NM62 1247 aa11.11□□□□□ -0.63
SNHG16-201ENST00000448136 TACC1O75410 805 aa11.11□□□□□ -0.63
SNHG16-201ENST00000448136 PAFAH1B1P43034 410 aa11.11□□□□□ -0.63
SNHG16-201ENST00000448136 KIF11P52732 1056 aa11.11□□□□□ -0.63
SNHG16-201ENST00000448136 DYNLL1P63167 89 aaKnown RBP11.11□□□□□ -0.63
SNHG16-201ENST00000448136 TUBB4BP68371 445 aa11.11□□□□□ -0.63
SNHG16-201ENST00000448136 TDRD12Q587J7 1177 aaKnown RBP11.11□□□□□ -0.63
SNHG16-201ENST00000448136 TRIM68Q6AZZ1 485 aa11.11□□□□□ -0.63
SNHG16-201ENST00000448136 LMBR1Q8WVP7 490 aa11.11□□□□□ -0.63
SNHG16-201ENST00000448136 ATP6V1G3Q96LB4 118 aa11.11□□□□□ -0.63
SNHG16-201ENST00000448136 CNOT6LQ96LI5 555 aaKnown RBP11.11□□□□□ -0.63
SNHG16-201ENST00000448136 CPVLQ9H3G5 476 aa11.11□□□□□ -0.63
SNHG16-201ENST00000448136 SEMA6BQ9H3T3 888 aa11.11□□□□□ -0.63
SNHG16-201ENST00000448136 CNNM1Q9NRU3 951 aa11.11□□□□□ -0.63
SNHG16-201ENST00000448136 A0A1B0GUA9 196 aa11.11□□□□□ -0.63
SNHG16-201ENST00000448136 NUTM2BA6NNL0 878 aaPredicted RBP11.11□□□□□ -0.63
SNHG16-201ENST00000448136 NUTM2EB1AL46 878 aaPredicted RBP11.11□□□□□ -0.63
SNHG16-201ENST00000448136 H0YGN5 161 aa11.11□□□□□ -0.63
SNHG16-201ENST00000448136 DIAPH2O60879 1101 aa11.11□□□□□ -0.63
SNHG16-201ENST00000448136 TROAPQ12815 778 aa11.11□□□□□ -0.63
SNHG16-201ENST00000448136 CCDC178Q5BJE1 867 aa11.11□□□□□ -0.63
SNHG16-201ENST00000448136 FAM47AQ5JRC9 791 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms