RNA–Protein interactions for RNA: ENST00000447966.6

ASIC1-202, Transcript of acid sensing ion channel subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ASIC1, Length 3,778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC1-202ENST00000447966 SLIT1O75093 1534 aa17.49■□□□□ 0.39
ASIC1-202ENST00000447966 NKRFO15226 690 aaKnown RBP eCLIP17.49■□□□□ 0.39
ASIC1-202ENST00000447966 PFKFB3Q16875 520 aaPredicted RBP17.49■□□□□ 0.39
ASIC1-202ENST00000447966 CCDC121Q6ZUS5 278 aa17.49■□□□□ 0.39
ASIC1-202ENST00000447966 MSANTD4Q8NCY6 345 aa17.49■□□□□ 0.39
ASIC1-202ENST00000447966 MGARPQ8TDB4 240 aa17.49■□□□□ 0.39
ASIC1-202ENST00000447966 GNA11P29992 359 aa17.49■□□□□ 0.39
ASIC1-202ENST00000447966 CTNNA1P35221 906 aaKnown RBP17.49■□□□□ 0.39
ASIC1-202ENST00000447966 KRT71Q3SY84 523 aa17.49■□□□□ 0.39
ASIC1-202ENST00000447966 NEK8Q86SG6 692 aa17.49■□□□□ 0.39
ASIC1-202ENST00000447966 LOC102724428A0A0B4J2F2 783 aa17.49■□□□□ 0.39
ASIC1-202ENST00000447966 MYO1FO00160 1098 aa17.49■□□□□ 0.39
ASIC1-202ENST00000447966 TDP2O95551 362 aa17.49■□□□□ 0.39
ASIC1-202ENST00000447966 IFNAR2P48551 515 aa17.49■□□□□ 0.39
ASIC1-202ENST00000447966 GNAQP50148 359 aa17.49■□□□□ 0.39
ASIC1-202ENST00000447966 SIK1P57059 783 aa17.49■□□□□ 0.39
ASIC1-202ENST00000447966 DAAM2Q86T65 1068 aa17.49■□□□□ 0.39
ASIC1-202ENST00000447966 GLIS3Q8NEA6 775 aa17.49■□□□□ 0.39
ASIC1-202ENST00000447966 SH3RF3Q8TEJ3 882 aaPredicted RBP17.49■□□□□ 0.39
ASIC1-202ENST00000447966 SHISA4Q96DD7 197 aa17.49■□□□□ 0.39
ASIC1-202ENST00000447966 TSGA10Q9BZW7 698 aa17.49■□□□□ 0.39
ASIC1-202ENST00000447966 SPATA31A3Q5VYP0 1347 aa17.48■□□□□ 0.39
ASIC1-202ENST00000447966 EPHB6O15197 1021 aa17.48■□□□□ 0.39
ASIC1-202ENST00000447966 SSR1P43307 286 aaKnown RBP17.48■□□□□ 0.39
ASIC1-202ENST00000447966 C3orf67Q6ZVT6 689 aa17.48■□□□□ 0.39
ASIC1-202ENST00000447966 BRINP3Q76B58 766 aa17.48■□□□□ 0.39
ASIC1-202ENST00000447966 STIM2Q9P246 746 aa17.48■□□□□ 0.39
ASIC1-202ENST00000447966 CAPN11Q9UMQ6 739 aa17.48■□□□□ 0.39
ASIC1-202ENST00000447966 AKAP12Q02952 1782 aa17.48■□□□□ 0.39
ASIC1-202ENST00000447966 KCNQ2O43526 872 aa17.48■□□□□ 0.39
ASIC1-202ENST00000447966 DDAH1O94760 285 aa17.48■□□□□ 0.39
ASIC1-202ENST00000447966 TUBB4BP68371 445 aa17.48■□□□□ 0.39
ASIC1-202ENST00000447966 SEC23AQ15436 765 aa17.48■□□□□ 0.39
ASIC1-202ENST00000447966 TRAPPC11Q7Z392 1133 aa17.48■□□□□ 0.39
ASIC1-202ENST00000447966 CABS1Q96KC9 395 aa17.48■□□□□ 0.39
ASIC1-202ENST00000447966 SLC4A9Q96Q91 983 aa17.48■□□□□ 0.39
ASIC1-202ENST00000447966 CNTNAP5Q8WYK1 1306 aa17.48■□□□□ 0.39
ASIC1-202ENST00000447966 USH1GQ495M9 461 aa17.48■□□□□ 0.39
ASIC1-202ENST00000447966 PDXDC2PQ6P474 469 aa17.48■□□□□ 0.39
ASIC1-202ENST00000447966 PNMA8AQ86V59 439 aaPredicted RBP17.48■□□□□ 0.39
ASIC1-202ENST00000447966 FAM84BQ96KN1 310 aaPredicted RBP17.48■□□□□ 0.39
ASIC1-202ENST00000447966 NPHP3-ACAD11A0A0J9YXS1 232 aa17.47■□□□□ 0.39
ASIC1-202ENST00000447966 SFI1A8K8P3 1242 aa17.47■□□□□ 0.39
ASIC1-202ENST00000447966 GNPATO15228 680 aa17.47■□□□□ 0.39
ASIC1-202ENST00000447966 TRIM28Q13263 835 aaKnown RBP17.47■□□□□ 0.39
ASIC1-202ENST00000447966 RPS6KA1Q15418 735 aa17.47■□□□□ 0.39
ASIC1-202ENST00000447966 CTNNBL1Q8WYA6 563 aaPredicted RBP17.47■□□□□ 0.39
ASIC1-202ENST00000447966 EIF4E1BA6NMX2 242 aaKnown RBP17.47■□□□□ 0.39
ASIC1-202ENST00000447966 RPSAP08865 295 aaKnown RBP17.47■□□□□ 0.39
ASIC1-202ENST00000447966 SLCO1A2P46721 670 aa17.47■□□□□ 0.39
ASIC1-202ENST00000447966 PAXIP1Q6ZW49 1069 aaPredicted RBP17.47■□□□□ 0.39
ASIC1-202ENST00000447966 TBC1D31Q96DN5 1066 aa17.47■□□□□ 0.39
ASIC1-202ENST00000447966 KIAA1024Q9UPX6 916 aa17.47■□□□□ 0.39
ASIC1-202ENST00000447966 CLIC2O15247 247 aa17.47■□□□□ 0.39
ASIC1-202ENST00000447966 TCP10Q12799 353 aa17.47■□□□□ 0.39
ASIC1-202ENST00000447966 PAK2Q13177 524 aa17.47■□□□□ 0.39
ASIC1-202ENST00000447966 TRADDQ15628 312 aa17.47■□□□□ 0.39
ASIC1-202ENST00000447966 ARHGAP44Q17R89 818 aa17.47■□□□□ 0.39
ASIC1-202ENST00000447966 GBP6Q6ZN66 633 aa17.47■□□□□ 0.39
ASIC1-202ENST00000447966 SLC51AQ86UW1 340 aa17.47■□□□□ 0.39
ASIC1-202ENST00000447966 MRRFQ96E11 262 aaKnown RBP17.47■□□□□ 0.39
ASIC1-202ENST00000447966 DDX47Q9H0S4 455 aaKnown RBP17.47■□□□□ 0.39
ASIC1-202ENST00000447966 MINPP1Q9UNW1 487 aa17.47■□□□□ 0.39
ASIC1-202ENST00000447966 TCP1P17987 556 aaKnown RBP17.46■□□□□ 0.39
ASIC1-202ENST00000447966 PPP2R5BQ15173 497 aa17.46■□□□□ 0.39
ASIC1-202ENST00000447966 NT5DC1Q5TFE4 455 aa17.46■□□□□ 0.39
ASIC1-202ENST00000447966 TXNRD3Q86VQ6 643 aa17.46■□□□□ 0.39
ASIC1-202ENST00000447966 LARP4BQ92615 738 aaKnown RBP17.46■□□□□ 0.39
ASIC1-202ENST00000447966 TRIM9Q9C026 710 aa17.46■□□□□ 0.39
ASIC1-202ENST00000447966 SNX12Q9UMY4 172 aa17.46■□□□□ 0.39
ASIC1-202ENST00000447966 SYF2O95926 243 aaKnown RBP17.46■□□□□ 0.39
ASIC1-202ENST00000447966 ASIC2Q16515 512 aa17.46■□□□□ 0.39
ASIC1-202ENST00000447966 VWA3BQ502W6 1294 aa17.46■□□□□ 0.39
ASIC1-202ENST00000447966 WDR59Q6PJI9 974 aa17.46■□□□□ 0.39
ASIC1-202ENST00000447966 FBXL16Q8N461 479 aa17.46■□□□□ 0.39
ASIC1-202ENST00000447966 VGLL2Q8N8G2 317 aa17.46■□□□□ 0.39
ASIC1-202ENST00000447966 PAIP2Q9BPZ3 127 aaKnown RBP17.46■□□□□ 0.39
ASIC1-202ENST00000447966 FAM53CQ9NYF3 392 aa17.46■□□□□ 0.39
ASIC1-202ENST00000447966 IL6STP40189 918 aaPredicted RBP17.45■□□□□ 0.38
ASIC1-202ENST00000447966 APTXQ7Z2E3 356 aaKnown RBP17.45■□□□□ 0.38
ASIC1-202ENST00000447966 CCDC84Q86UT8 332 aaPredicted RBP17.45■□□□□ 0.38
ASIC1-202ENST00000447966 U2AF1L4Q8WU68 220 aaKnown RBP17.45■□□□□ 0.38
ASIC1-202ENST00000447966 HNRNPLLQ8WVV9 542 aaKnown RBP17.45■□□□□ 0.38
ASIC1-202ENST00000447966 TMEM47Q9BQJ4 181 aa17.45■□□□□ 0.38
ASIC1-202ENST00000447966 RAB21Q9UL25 225 aa17.45■□□□□ 0.38
ASIC1-202ENST00000447966 C1orf167Q5SNV9 1468 aa17.45■□□□□ 0.38
ASIC1-202ENST00000447966 ACTN1P12814 892 aa17.45■□□□□ 0.38
ASIC1-202ENST00000447966 COPB2P35606 906 aa17.45■□□□□ 0.38
ASIC1-202ENST00000447966 TNNC1P63316 161 aa17.45■□□□□ 0.38
ASIC1-202ENST00000447966 MICALCLQ6ZW33 695 aa17.45■□□□□ 0.38
ASIC1-202ENST00000447966 MYOCDQ8IZQ8 938 aa17.45■□□□□ 0.38
ASIC1-202ENST00000447966 TSEN2Q8NCE0 465 aaKnown RBP17.45■□□□□ 0.38
ASIC1-202ENST00000447966 DDX12PQ92771 950 aa17.45■□□□□ 0.38
ASIC1-202ENST00000447966 ZIM3Q96PE6 472 aa17.45■□□□□ 0.38
ASIC1-202ENST00000447966 GGT7Q9UJ14 662 aa17.45■□□□□ 0.38
ASIC1-202ENST00000447966 A0A087WUV0 522 aaPredicted RBP17.45■□□□□ 0.38
ASIC1-202ENST00000447966 FAM196BA6NMK8 535 aa17.45■□□□□ 0.38
ASIC1-202ENST00000447966 SEMA3EO15041 775 aa17.45■□□□□ 0.38
ASIC1-202ENST00000447966 VIMP08670 466 aaKnown RBP17.45■□□□□ 0.38
ASIC1-202ENST00000447966 GJC1P36383 396 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms