RNA–Protein interactions for RNA: ENST00000447933.5

LINC01006-206, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

TSL 3

Gene LINC01006, Length 766 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-206ENST00000447933 LRRC2Q9BYS8 371 aa17.44■□□□□ 0.38
LINC01006-206ENST00000447933 SLC12A7Q9Y666 1083 aa17.44■□□□□ 0.38
LINC01006-206ENST00000447933 ZEB2O60315 1214 aa17.43■□□□□ 0.38
LINC01006-206ENST00000447933 CFBP00751 764 aa17.43■□□□□ 0.38
LINC01006-206ENST00000447933 CENPBP07199 599 aaPredicted RBP17.43■□□□□ 0.38
LINC01006-206ENST00000447933 PTGS1P23219 599 aa17.43■□□□□ 0.38
LINC01006-206ENST00000447933 CDK7P50613 346 aa17.43■□□□□ 0.38
LINC01006-206ENST00000447933 ADCK5Q3MIX3 580 aa17.43■□□□□ 0.38
LINC01006-206ENST00000447933 SCFD2Q8WU76 684 aa17.43■□□□□ 0.38
LINC01006-206ENST00000447933 PDLIM7Q9NR12 457 aa17.43■□□□□ 0.38
LINC01006-206ENST00000447933 MYH6P13533 1939 aa17.43■□□□□ 0.38
LINC01006-206ENST00000447933 NKRFO15226 690 aaKnown RBP eCLIP17.42■□□□□ 0.38
LINC01006-206ENST00000447933 CABYRO75952 493 aa17.42■□□□□ 0.38
LINC01006-206ENST00000447933 HSPA4P34932 840 aa17.42■□□□□ 0.38
LINC01006-206ENST00000447933 ARHGEF16Q5VV41 709 aa17.42■□□□□ 0.38
LINC01006-206ENST00000447933 SRBD1Q8N5C6 995 aaKnown RBP17.42■□□□□ 0.38
LINC01006-206ENST00000447933 FANCBQ8NB91 859 aa17.42■□□□□ 0.38
LINC01006-206ENST00000447933 UBE2OQ9C0C9 1292 aaKnown RBP17.42■□□□□ 0.38
LINC01006-206ENST00000447933 PCDH10Q9P2E7 1040 aa17.42■□□□□ 0.38
LINC01006-206ENST00000447933 A0A0U1RQG5 324 aaPredicted RBP17.41■□□□□ 0.38
LINC01006-206ENST00000447933 TRIM43BA6NCK2 446 aa17.41■□□□□ 0.38
LINC01006-206ENST00000447933 GCOM1H8Y6P7 765 aaPredicted RBP17.41■□□□□ 0.38
LINC01006-206ENST00000447933 ARVCFO00192 962 aa17.41■□□□□ 0.38
LINC01006-206ENST00000447933 KIAA0355O15063 1070 aa17.41■□□□□ 0.38
LINC01006-206ENST00000447933 PQBP1O60828 265 aaKnown RBP17.41■□□□□ 0.38
LINC01006-206ENST00000447933 REC8O95072 547 aa17.41■□□□□ 0.38
LINC01006-206ENST00000447933 PLEKHA8P1O95397 391 aa17.41■□□□□ 0.38
LINC01006-206ENST00000447933 HMGB1P09429 215 aaKnown RBP17.41■□□□□ 0.38
LINC01006-206ENST00000447933 CLTBP09497 229 aa17.41■□□□□ 0.38
LINC01006-206ENST00000447933 POLR2MP0CAP2 368 aa17.41■□□□□ 0.38
LINC01006-206ENST00000447933 RXRAP19793 462 aa17.41■□□□□ 0.38
LINC01006-206ENST00000447933 MDM2Q00987 491 aaPredicted RBP17.41■□□□□ 0.38
LINC01006-206ENST00000447933 TTLL4Q14679 1199 aa17.41■□□□□ 0.38
LINC01006-206ENST00000447933 PPP2R5BQ15173 497 aa17.41■□□□□ 0.38
LINC01006-206ENST00000447933 STXBP2Q15833 593 aa17.41■□□□□ 0.38
LINC01006-206ENST00000447933 CXCL17Q6UXB2 119 aa17.41■□□□□ 0.38
LINC01006-206ENST00000447933 SH3RF1Q7Z6J0 888 aa17.41■□□□□ 0.38
LINC01006-206ENST00000447933 VTI1AQ96AJ9 217 aa17.41■□□□□ 0.38
LINC01006-206ENST00000447933 TRIM43Q96BQ3 446 aaPredicted RBP17.41■□□□□ 0.38
LINC01006-206ENST00000447933 RRP36Q96EU6 259 aaKnown RBP17.41■□□□□ 0.38
LINC01006-206ENST00000447933 LBHD1Q9BQE6 289 aaPredicted RBP17.41■□□□□ 0.38
LINC01006-206ENST00000447933 PRDM5Q9NQX1 630 aaPredicted RBP17.41■□□□□ 0.38
LINC01006-206ENST00000447933 PXMP2Q9NR77 195 aa17.41■□□□□ 0.38
LINC01006-206ENST00000447933 DCDC2CA8MYV0 355 aa17.4■□□□□ 0.38
LINC01006-206ENST00000447933 EIF3JO75822 258 aaKnown RBP17.4■□□□□ 0.38
LINC01006-206ENST00000447933 NR3C2P08235 984 aa17.4■□□□□ 0.38
LINC01006-206ENST00000447933 TXNP10599 105 aaKnown RBP17.4■□□□□ 0.38
LINC01006-206ENST00000447933 EIF2AK2P19525 551 aaKnown RBP17.4■□□□□ 0.38
LINC01006-206ENST00000447933 HOXA13P31271 388 aaPredicted RBP17.4■□□□□ 0.38
LINC01006-206ENST00000447933 FAAP100Q0VG06 881 aa17.4■□□□□ 0.38
LINC01006-206ENST00000447933 CCDC62Q6P9F0 684 aa17.4■□□□□ 0.38
LINC01006-206ENST00000447933 SYNE3Q6ZMZ3 975 aa17.4■□□□□ 0.38
LINC01006-206ENST00000447933 SLC43A3Q8NBI5 491 aa17.4■□□□□ 0.38
LINC01006-206ENST00000447933 PIBF1Q8WXW3 757 aa17.4■□□□□ 0.38
LINC01006-206ENST00000447933 MROH7Q68CQ1 1323 aa17.4■□□□□ 0.38
LINC01006-206ENST00000447933 EPB41L2O43491 1005 aaKnown RBP17.39■□□□□ 0.37
LINC01006-206ENST00000447933 ARIH2O95376 493 aa17.39■□□□□ 0.37
LINC01006-206ENST00000447933 CPT1AP50416 773 aa17.39■□□□□ 0.37
LINC01006-206ENST00000447933 APOA5Q6Q788 366 aa17.39■□□□□ 0.37
LINC01006-206ENST00000447933 TMTC3Q6ZXV5 915 aa17.39■□□□□ 0.37
LINC01006-206ENST00000447933 RAB11FIP4Q86YS3 637 aa17.39■□□□□ 0.37
LINC01006-206ENST00000447933 TDHQ8IZJ6 230 aa17.39■□□□□ 0.37
LINC01006-206ENST00000447933 CMTR1Q8N1G2 835 aaKnown RBP17.39■□□□□ 0.37
LINC01006-206ENST00000447933 OR6J1Q8NGC5 347 aa17.39■□□□□ 0.37
LINC01006-206ENST00000447933 TCEANC2Q96MN5 208 aa17.39■□□□□ 0.37
LINC01006-206ENST00000447933 PDCD2LQ9BRP1 358 aa17.39■□□□□ 0.37
LINC01006-206ENST00000447933 SEZ6LQ9BYH1 1024 aa17.39■□□□□ 0.37
LINC01006-206ENST00000447933 SEC63Q9UGP8 760 aaKnown RBP17.39■□□□□ 0.37
LINC01006-206ENST00000447933 BRPF3Q9ULD4 1205 aa17.39■□□□□ 0.37
LINC01006-206ENST00000447933 SNX14Q9Y5W7 946 aa17.39■□□□□ 0.37
LINC01006-206ENST00000447933 A6NJR5 290 aa17.38■□□□□ 0.37
LINC01006-206ENST00000447933 SEPT14Q6ZU15 432 aa17.38■□□□□ 0.37
LINC01006-206ENST00000447933 VSIG10LQ86VR7 867 aa17.38■□□□□ 0.37
LINC01006-206ENST00000447933 MICU3Q86XE3 530 aa17.38■□□□□ 0.37
LINC01006-206ENST00000447933 COPS5Q92905 334 aa17.38■□□□□ 0.37
LINC01006-206ENST00000447933 BADQ92934 168 aa17.38■□□□□ 0.37
LINC01006-206ENST00000447933 TMEM39AQ9NV64 488 aa17.38■□□□□ 0.37
LINC01006-206ENST00000447933 POLR3EQ9NVU0 708 aa17.38■□□□□ 0.37
LINC01006-206ENST00000447933 GRIN2DO15399 1336 aa17.38■□□□□ 0.37
LINC01006-206ENST00000447933 ZBTB43O43298 467 aa17.37■□□□□ 0.37
LINC01006-206ENST00000447933 ITGB8P26012 769 aa17.37■□□□□ 0.37
LINC01006-206ENST00000447933 RCAN1P53805 252 aa17.37■□□□□ 0.37
LINC01006-206ENST00000447933 ITGA7Q13683 1181 aa17.37■□□□□ 0.37
LINC01006-206ENST00000447933 BRDTQ58F21 947 aaPredicted RBP17.37■□□□□ 0.37
LINC01006-206ENST00000447933 FAM126BQ8IXS8 530 aa17.37■□□□□ 0.37
LINC01006-206ENST00000447933 JAKMIP1Q96N16 626 aaKnown RBP17.37■□□□□ 0.37
LINC01006-206ENST00000447933 RBM28Q9NW13 759 aaKnown RBP17.37■□□□□ 0.37
LINC01006-206ENST00000447933 DDX41Q9UJV9 622 aaKnown RBP17.37■□□□□ 0.37
LINC01006-206ENST00000447933 TBX21Q9UL17 535 aa17.37■□□□□ 0.37
LINC01006-206ENST00000447933 PIK3CDO00329 1044 aa17.36■□□□□ 0.37
LINC01006-206ENST00000447933 KPNA6O60684 536 aa17.36■□□□□ 0.37
LINC01006-206ENST00000447933 PURAQ00577 322 aaKnown RBP17.36■□□□□ 0.37
LINC01006-206ENST00000447933 PGM5Q15124 567 aa17.36■□□□□ 0.37
LINC01006-206ENST00000447933 LRIT3Q3SXY7 679 aa17.36■□□□□ 0.37
LINC01006-206ENST00000447933 FCHSD1Q86WN1 690 aa17.36■□□□□ 0.37
LINC01006-206ENST00000447933 FBXL16Q8N461 479 aa17.36■□□□□ 0.37
LINC01006-206ENST00000447933 MTG1Q9BT17 334 aaPredicted RBP17.36■□□□□ 0.37
LINC01006-206ENST00000447933 LAMA3Q16787 3333 aa17.36■□□□□ 0.37
LINC01006-206ENST00000447933 TLR3O15455 904 aaKnown RBP17.35■□□□□ 0.37
LINC01006-206ENST00000447933 RGS20O76081 388 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms