RNA–Protein interactions for RNA: ENST00000447360.6

LRRC28-203, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-203ENST00000447360 NOD1Q9Y239 953 aa8.45□□□□□ -1.06
LRRC28-203ENST00000447360 EXOC6BQ9Y2D4 811 aa8.45□□□□□ -1.06
LRRC28-203ENST00000447360 RAD50Q92878 1312 aa8.45□□□□□ -1.06
LRRC28-203ENST00000447360 ZDBF2Q9HCK1 2354 aa8.44□□□□□ -1.06
LRRC28-203ENST00000447360 ZNF318Q5VUA4 2279 aa8.44□□□□□ -1.06
LRRC28-203ENST00000447360 ABHD14A-ACY1A0A1B0GW23 586 aa8.44□□□□□ -1.06
LRRC28-203ENST00000447360 A6NJR5 290 aa8.44□□□□□ -1.06
LRRC28-203ENST00000447360 TMEM232C9JQI7 657 aa8.44□□□□□ -1.06
LRRC28-203ENST00000447360 NKRFO15226 690 aaKnown RBP eCLIP8.44□□□□□ -1.06
LRRC28-203ENST00000447360 PLA2G6O60733 806 aa8.44□□□□□ -1.06
LRRC28-203ENST00000447360 CXCL10P02778 98 aa8.44□□□□□ -1.06
LRRC28-203ENST00000447360 PTPN5P54829 565 aa8.44□□□□□ -1.06
LRRC28-203ENST00000447360 DEFB103AP81534 67 aa8.44□□□□□ -1.06
LRRC28-203ENST00000447360 GPNMBQ14956 572 aa8.44□□□□□ -1.06
LRRC28-203ENST00000447360 COL19A1Q14993 1142 aa8.44□□□□□ -1.06
LRRC28-203ENST00000447360 PKN1Q16512 942 aa8.44□□□□□ -1.06
LRRC28-203ENST00000447360 PTPROQ16827 1216 aa8.44□□□□□ -1.06
LRRC28-203ENST00000447360 SLFNL1Q499Z3 407 aa8.44□□□□□ -1.06
LRRC28-203ENST00000447360 ZKSCAN2Q63HK3 967 aa8.44□□□□□ -1.06
LRRC28-203ENST00000447360 SLFN13Q68D06 897 aa8.44□□□□□ -1.06
LRRC28-203ENST00000447360 GIMAP6Q6P9H5 292 aa8.44□□□□□ -1.06
LRRC28-203ENST00000447360 ADHFE1Q8IWW8 467 aa8.44□□□□□ -1.06
LRRC28-203ENST00000447360 OR6J1Q8NGC5 347 aa8.44□□□□□ -1.06
LRRC28-203ENST00000447360 RHPN1Q8TCX5 695 aa8.44□□□□□ -1.06
LRRC28-203ENST00000447360 STAG1Q8WVM7 1258 aa8.44□□□□□ -1.06
LRRC28-203ENST00000447360 PABPC5Q96DU9 382 aaKnown RBP8.44□□□□□ -1.06
LRRC28-203ENST00000447360 MRPL38Q96DV4 380 aaKnown RBP8.44□□□□□ -1.06
LRRC28-203ENST00000447360 CEP95Q96GE4 821 aa8.44□□□□□ -1.06
LRRC28-203ENST00000447360 PRRX2Q99811 253 aa8.44□□□□□ -1.06
LRRC28-203ENST00000447360 IL1RAPL2Q9NP60 686 aa8.44□□□□□ -1.06
LRRC28-203ENST00000447360 ADD3Q9UEY8 706 aaKnown RBP8.44□□□□□ -1.06
LRRC28-203ENST00000447360 INSL6Q9Y581 213 aa8.44□□□□□ -1.06
LRRC28-203ENST00000447360 DDX49Q9Y6V7 483 aaKnown RBP8.44□□□□□ -1.06
LRRC28-203ENST00000447360 H3BQ06 376 aaPredicted RBP8.43□□□□□ -1.06
LRRC28-203ENST00000447360 NCK2O43639 380 aa8.43□□□□□ -1.06
LRRC28-203ENST00000447360 IFIT2P09913 472 aaKnown RBP8.43□□□□□ -1.06
LRRC28-203ENST00000447360 ALAS1P13196 640 aa8.43□□□□□ -1.06
LRRC28-203ENST00000447360 SELPP16109 830 aa8.43□□□□□ -1.06
LRRC28-203ENST00000447360 RBL2Q08999 1139 aa8.43□□□□□ -1.06
LRRC28-203ENST00000447360 PTGISQ16647 500 aa8.43□□□□□ -1.06
LRRC28-203ENST00000447360 TIGD5Q53EQ6 642 aa8.43□□□□□ -1.06
LRRC28-203ENST00000447360 HERC4Q5GLZ8 1057 aaPredicted RBP8.43□□□□□ -1.06
LRRC28-203ENST00000447360 ZSCAN25Q6NSZ9 544 aa8.43□□□□□ -1.06
LRRC28-203ENST00000447360 CEP85Q6P2H3 762 aa8.43□□□□□ -1.06
LRRC28-203ENST00000447360 BMP8AQ7Z5Y6 402 aa8.43□□□□□ -1.06
LRRC28-203ENST00000447360 TMCO2Q7Z6W1 182 aaPredicted RBP8.43□□□□□ -1.06
LRRC28-203ENST00000447360 RASEFQ8IZ41 740 aa8.43□□□□□ -1.06
LRRC28-203ENST00000447360 ZNF444Q8N0Y2 327 aaPredicted RBP8.43□□□□□ -1.06
LRRC28-203ENST00000447360 LRRC47Q8N1G4 583 aaKnown RBP8.43□□□□□ -1.06
LRRC28-203ENST00000447360 FBXO22Q8NEZ5 403 aa8.43□□□□□ -1.06
LRRC28-203ENST00000447360 GMCL1Q96IK5 515 aa8.43□□□□□ -1.06
LRRC28-203ENST00000447360 CRBNQ96SW2 442 aa8.43□□□□□ -1.06
LRRC28-203ENST00000447360 POP1Q99575 1024 aaKnown RBP8.43□□□□□ -1.06
LRRC28-203ENST00000447360 PUS7LQ9H0K6 701 aaKnown RBP8.43□□□□□ -1.06
LRRC28-203ENST00000447360 MCM3APO60318 1980 aa8.42□□□□□ -1.06
LRRC28-203ENST00000447360 CACNA1HO95180 2353 aa8.42□□□□□ -1.06
LRRC28-203ENST00000447360 ATP5JP18859 108 aa8.42□□□□□ -1.06
LRRC28-203ENST00000447360 IRS1P35568 1242 aa8.42□□□□□ -1.06
LRRC28-203ENST00000447360 SLC1A4P43007 532 aa8.42□□□□□ -1.06
LRRC28-203ENST00000447360 ALDH5A1P51649 535 aaPredicted RBP8.42□□□□□ -1.06
LRRC28-203ENST00000447360 IKQ13123 557 aaPredicted RBP8.42□□□□□ -1.06
LRRC28-203ENST00000447360 IKBKEQ14164 716 aa8.42□□□□□ -1.06
LRRC28-203ENST00000447360 PPP2R5BQ15173 497 aa8.42□□□□□ -1.06
LRRC28-203ENST00000447360 MUM1L1Q5H9M0 696 aa8.42□□□□□ -1.06
LRRC28-203ENST00000447360 NSMFQ6X4W1 530 aa8.42□□□□□ -1.06
LRRC28-203ENST00000447360 LRRC8DQ7L1W4 858 aa8.42□□□□□ -1.06
LRRC28-203ENST00000447360 SESTD1Q86VW0 696 aa8.42□□□□□ -1.06
LRRC28-203ENST00000447360 BANK1Q8NDB2 785 aa8.42□□□□□ -1.06
LRRC28-203ENST00000447360 KIF1BPQ96EK5 621 aa8.42□□□□□ -1.06
LRRC28-203ENST00000447360 SAMD11Q96NU1 681 aa8.42□□□□□ -1.06
LRRC28-203ENST00000447360 CTAGE1Q96RT6 745 aa8.42□□□□□ -1.06
LRRC28-203ENST00000447360 STRBPQ96SI9 672 aaKnown RBP8.42□□□□□ -1.06
LRRC28-203ENST00000447360 PHOX2BQ99453 314 aa8.42□□□□□ -1.06
LRRC28-203ENST00000447360 HAUS7Q99871 368 aa8.42□□□□□ -1.06
LRRC28-203ENST00000447360 C17orf80Q9BSJ5 609 aa8.42□□□□□ -1.06
LRRC28-203ENST00000447360 BOLA2Q9H3K6 86 aa8.42□□□□□ -1.06
LRRC28-203ENST00000447360 FARP1Q9Y4F1 1045 aaPredicted RBP8.42□□□□□ -1.06
LRRC28-203ENST00000447360 SPTBN4Q9H254 2564 aa8.42□□□□□ -1.06
LRRC28-203ENST00000447360 GSG1L2A8MUP6 293 aa8.41□□□□□ -1.06
LRRC28-203ENST00000447360 MINDY4BA8MYZ0 360 aa8.41□□□□□ -1.06
LRRC28-203ENST00000447360 NBNO60934 754 aa8.41□□□□□ -1.06
LRRC28-203ENST00000447360 ICAM1P05362 532 aa8.41□□□□□ -1.06
LRRC28-203ENST00000447360 CKBP12277 381 aa8.41□□□□□ -1.06
LRRC28-203ENST00000447360 HTRA4P83105 476 aaPredicted RBP8.41□□□□□ -1.06
LRRC28-203ENST00000447360 BAATQ14032 418 aaPredicted RBP8.41□□□□□ -1.06
LRRC28-203ENST00000447360 SMAD2Q15796 467 aaKnown RBP8.41□□□□□ -1.06
LRRC28-203ENST00000447360 PPP4R3BQ5MIZ7 849 aa8.41□□□□□ -1.06
LRRC28-203ENST00000447360 FTSJ3Q8IY81 847 aaKnown RBP8.41□□□□□ -1.06
LRRC28-203ENST00000447360 PRSS33Q8NF86 280 aa8.41□□□□□ -1.06
LRRC28-203ENST00000447360 NEDD1Q8NHV4 660 aa8.41□□□□□ -1.06
LRRC28-203ENST00000447360 SP7Q8TDD2 431 aaPredicted RBP8.41□□□□□ -1.06
LRRC28-203ENST00000447360 SCFD2Q8WU76 684 aa8.41□□□□□ -1.06
LRRC28-203ENST00000447360 ANKS1AQ92625 1134 aa8.41□□□□□ -1.06
LRRC28-203ENST00000447360 EDAQ92838 391 aa8.41□□□□□ -1.06
LRRC28-203ENST00000447360 PURBQ96QR8 312 aaKnown RBP8.41□□□□□ -1.06
LRRC28-203ENST00000447360 MPHOSPH6Q99547 160 aaKnown RBP8.41□□□□□ -1.06
LRRC28-203ENST00000447360 CCPG1Q9ULG6 757 aa8.41□□□□□ -1.06
LRRC28-203ENST00000447360 ISY1Q9ULR0 285 aaKnown RBP8.41□□□□□ -1.06
LRRC28-203ENST00000447360 PTPRZ1P23471 2315 aaPredicted RBP8.41□□□□□ -1.06
LRRC28-203ENST00000447360 GREB1LQ9C091 1923 aaPredicted RBP8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms