RNA–Protein interactions for RNA: ENST00000447124.1

SDC1-205, Transcript of syndecan 1, humanhuman

TSL 4

Gene SDC1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-205ENST00000447124 MPHOSPH6Q99547 160 aaKnown RBP24.15■■□□□ 1.46
SDC1-205ENST00000447124 ESYT1Q9BSJ8 1104 aa24.15■■□□□ 1.46
SDC1-205ENST00000447124 PPP1R12CQ9BZL4 782 aa24.15■■□□□ 1.46
SDC1-205ENST00000447124 COL6A3P12111 3177 aa24.14■■□□□ 1.46
SDC1-205ENST00000447124 B4DLN1 442 aa24.14■■□□□ 1.45
SDC1-205ENST00000447124 NKRFO15226 690 aaKnown RBP eCLIP24.14■■□□□ 1.454e-6■■□□□ 11.7
SDC1-205ENST00000447124 CYP2C18P33260 490 aa24.14■■□□□ 1.45
SDC1-205ENST00000447124 MRPL12P52815 198 aaKnown RBP24.14■■□□□ 1.45
SDC1-205ENST00000447124 PURAQ00577 322 aaKnown RBP24.14■■□□□ 1.45
SDC1-205ENST00000447124 GHRHRQ02643 423 aa24.14■■□□□ 1.45
SDC1-205ENST00000447124 PPP2R5BQ15173 497 aa24.14■■□□□ 1.45
SDC1-205ENST00000447124 TMEM67Q5HYA8 995 aa24.14■■□□□ 1.45
SDC1-205ENST00000447124 PIGSQ96S52 555 aa24.14■■□□□ 1.45
SDC1-205ENST00000447124 PCDHA1Q9Y5I3 950 aa24.14■■□□□ 1.45
SDC1-205ENST00000447124 ERICH2A1L162 156 aa24.13■■□□□ 1.45
SDC1-205ENST00000447124 B4GALT4O60513 344 aa24.13■■□□□ 1.45
SDC1-205ENST00000447124 CFBP00751 764 aa24.13■■□□□ 1.45
SDC1-205ENST00000447124 MYL3P08590 195 aa24.13■■□□□ 1.45
SDC1-205ENST00000447124 CSF2RAP15509 400 aa24.13■■□□□ 1.45
SDC1-205ENST00000447124 HSD17B4P51659 736 aa24.13■■□□□ 1.45
SDC1-205ENST00000447124 RNPC3Q96LT9 517 aaKnown RBP24.13■■□□□ 1.45
SDC1-205ENST00000447124 IWS1Q96ST2 819 aa24.13■■□□□ 1.45
SDC1-205ENST00000447124 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.13■■□□□ 1.45
SDC1-205ENST00000447124 SEZ6LQ9BYH1 1024 aa24.13■■□□□ 1.45
SDC1-205ENST00000447124 POLR3EQ9NVU0 708 aa24.13■■□□□ 1.45
SDC1-205ENST00000447124 UMODL1Q5DID0 1318 aa24.12■■□□□ 1.45
SDC1-205ENST00000447124 A6NJR5 290 aa24.12■■□□□ 1.45
SDC1-205ENST00000447124 EIF2AK2P19525 551 aaKnown RBP24.12■■□□□ 1.45
SDC1-205ENST00000447124 CPT1AP50416 773 aa24.12■■□□□ 1.45
SDC1-205ENST00000447124 TTLL4Q14679 1199 aa24.12■■□□□ 1.45
SDC1-205ENST00000447124 TMEM240Q5SV17 173 aa24.12■■□□□ 1.45
SDC1-205ENST00000447124 SEPT14Q6ZU15 432 aa24.12■■□□□ 1.45
SDC1-205ENST00000447124 HOMER1Q86YM7 354 aa24.12■■□□□ 1.45
SDC1-205ENST00000447124 PPP1R13LQ8WUF5 828 aa24.12■■□□□ 1.45
SDC1-205ENST00000447124 FAM161BQ96MY7 647 aa24.12■■□□□ 1.45
SDC1-205ENST00000447124 GUCD1Q96NT3 240 aa24.12■■□□□ 1.45
SDC1-205ENST00000447124 SLC27A2O14975 620 aa24.11■■□□□ 1.45
SDC1-205ENST00000447124 NR3C2P08235 984 aa24.11■■□□□ 1.45
SDC1-205ENST00000447124 ACRP10323 421 aa24.11■■□□□ 1.45
SDC1-205ENST00000447124 SMAD3P84022 425 aaKnown RBP24.11■■□□□ 1.45
SDC1-205ENST00000447124 SART3Q15020 963 aaKnown RBP24.11■■□□□ 1.45
SDC1-205ENST00000447124 NECTIN1Q15223 517 aa24.11■■□□□ 1.45
SDC1-205ENST00000447124 STXBP2Q15833 593 aa24.11■■□□□ 1.45
SDC1-205ENST00000447124 LY6KQ17RY6 165 aa24.11■■□□□ 1.45
SDC1-205ENST00000447124 ARHGEF16Q5VV41 709 aa24.11■■□□□ 1.45
SDC1-205ENST00000447124 MTG1Q9BT17 334 aaPredicted RBP24.11■■□□□ 1.45
SDC1-205ENST00000447124 ALDH8A1Q9H2A2 487 aaPredicted RBP24.11■■□□□ 1.45
SDC1-205ENST00000447124 LY9Q9HBG7 655 aa24.11■■□□□ 1.45
SDC1-205ENST00000447124 PXMP2Q9NR77 195 aa24.11■■□□□ 1.45
SDC1-205ENST00000447124 STXBP5LQ9Y2K9 1186 aa24.11■■□□□ 1.45
SDC1-205ENST00000447124 MYH6P13533 1939 aa24.11■■□□□ 1.45
SDC1-205ENST00000447124 PPIGQ13427 754 aaKnown RBP eCLIP24.1■■□□□ 1.45
SDC1-205ENST00000447124 CENPQQ7L2Z9 268 aaPredicted RBP24.1■■□□□ 1.45
SDC1-205ENST00000447124 CATIPQ7Z7H3 387 aa24.1■■□□□ 1.45
SDC1-205ENST00000447124 TMEM199Q8N511 208 aa24.1■■□□□ 1.45
SDC1-205ENST00000447124 NOC4LQ9BVI4 516 aaKnown RBP24.1■■□□□ 1.45
SDC1-205ENST00000447124 SEMA6BQ9H3T3 888 aa24.1■■□□□ 1.45
SDC1-205ENST00000447124 EIF3JO75822 258 aaKnown RBP24.09■■□□□ 1.45
SDC1-205ENST00000447124 HOXA13P31271 388 aaPredicted RBP24.09■■□□□ 1.45
SDC1-205ENST00000447124 NBPF20Q3BBV1 942 aa24.09■■□□□ 1.45
SDC1-205ENST00000447124 BMP2KLQ5H9B9 411 aa24.09■■□□□ 1.45
SDC1-205ENST00000447124 CREB3L3Q68CJ9 461 aa24.09■■□□□ 1.45
SDC1-205ENST00000447124 ZNF365Q70YC5 407 aa24.09■■□□□ 1.45
SDC1-205ENST00000447124 MYL10Q9BUA6 226 aa24.09■■□□□ 1.45
SDC1-205ENST00000447124 HIPK3Q9H422 1215 aa24.09■■□□□ 1.45
SDC1-205ENST00000447124 TRMT13Q9NUP7 481 aaKnown RBP24.09■■□□□ 1.45
SDC1-205ENST00000447124 DDX41Q9UJV9 622 aaKnown RBP24.09■■□□□ 1.45
SDC1-205ENST00000447124 PNMA6FA0A0J9YX94 578 aa24.08■■□□□ 1.45
SDC1-205ENST00000447124 PRC1O43663 620 aa24.08■■□□□ 1.45
SDC1-205ENST00000447124 CCL23P55773 120 aa24.08■■□□□ 1.45
SDC1-205ENST00000447124 ARHGAP1Q07960 439 aa24.08■■□□□ 1.45
SDC1-205ENST00000447124 RASIP1Q5U651 963 aa24.08■■□□□ 1.45
SDC1-205ENST00000447124 AFG1LQ8WV93 481 aa24.08■■□□□ 1.45
SDC1-205ENST00000447124 VWCEQ96DN2 955 aa24.08■■□□□ 1.45
SDC1-205ENST00000447124 PDCD2LQ9BRP1 358 aa24.08■■□□□ 1.45
SDC1-205ENST00000447124 TTYH1Q9H313 450 aaPredicted RBP24.08■■□□□ 1.45
SDC1-205ENST00000447124 MAP3K20Q9NYL2 800 aaKnown RBP24.08■■□□□ 1.45
SDC1-205ENST00000447124 KPNA6O60684 536 aa24.07■■□□□ 1.44
SDC1-205ENST00000447124 RGS20O76081 388 aa24.07■■□□□ 1.44
SDC1-205ENST00000447124 CYP2C9P11712 490 aa24.07■■□□□ 1.44
SDC1-205ENST00000447124 BRDTQ58F21 947 aaPredicted RBP24.07■■□□□ 1.44
SDC1-205ENST00000447124 ZNF697Q5TEC3 545 aa24.07■■□□□ 1.44
SDC1-205ENST00000447124 ZNF654Q8IZM8 581 aa24.07■■□□□ 1.44
SDC1-205ENST00000447124 SAMD3Q8N6K7 520 aa24.07■■□□□ 1.44
SDC1-205ENST00000447124 PIBF1Q8WXW3 757 aa24.07■■□□□ 1.44
SDC1-205ENST00000447124 MTA3Q9BTC8 594 aa24.07■■□□□ 1.44
SDC1-205ENST00000447124 WNT8AQ9H1J5 351 aa24.07■■□□□ 1.44
SDC1-205ENST00000447124 IL23AQ9NPF7 189 aa24.07■■□□□ 1.44
SDC1-205ENST00000447124 SCN10AQ9Y5Y9 1956 aa24.06■■□□□ 1.44
SDC1-205ENST00000447124 HSFX4A0A1B0GTS1 333 aaPredicted RBP24.06■■□□□ 1.44
SDC1-205ENST00000447124 HSFX3A0A1B0GWH4 333 aaPredicted RBP24.06■■□□□ 1.44
SDC1-205ENST00000447124 SH2B2O14492 632 aaPredicted RBP24.06■■□□□ 1.44
SDC1-205ENST00000447124 GH1P01241 217 aa24.06■■□□□ 1.44
SDC1-205ENST00000447124 VSIG10LQ86VR7 867 aa24.06■■□□□ 1.44
SDC1-205ENST00000447124 IL31RAQ8NI17 732 aa24.06■■□□□ 1.44
SDC1-205ENST00000447124 ZFP91Q96JP5 570 aaPredicted RBP24.06■■□□□ 1.44
SDC1-205ENST00000447124 MAP3K14Q99558 947 aa24.06■■□□□ 1.44
SDC1-205ENST00000447124 ANO2Q9NQ90 1003 aa24.06■■□□□ 1.44
SDC1-205ENST00000447124 MYCLP12524 364 aaPredicted RBP24.05■■□□□ 1.44
SDC1-205ENST00000447124 MCM5P33992 734 aa24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms