RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 P2RX5Q93086 422 aa8.57□□□□□ -1.04
SMG1-202ENST00000446231 AIFM3Q96NN9 605 aa8.57□□□□□ -1.04
SMG1-202ENST00000446231 FGFR1OP2Q9NVK5 253 aa8.57□□□□□ -1.04
SMG1-202ENST00000446231 PCDHB6Q9Y5E3 794 aa8.57□□□□□ -1.04
SMG1-202ENST00000446231 ANKRD12Q6UB98 2062 aa8.57□□□□□ -1.04
SMG1-202ENST00000446231 TSPY3P0CV98 308 aa8.57□□□□□ -1.04
SMG1-202ENST00000446231 TSPY8P0CW00 308 aa8.57□□□□□ -1.04
SMG1-202ENST00000446231 LRRC37BQ96QE4 947 aa8.57□□□□□ -1.04
SMG1-202ENST00000446231 SRPRBQ9Y5M8 271 aaKnown RBP8.57□□□□□ -1.04
SMG1-202ENST00000446231 EIF2AK4Q9P2K8 1649 aaKnown RBP8.57□□□□□ -1.04
SMG1-202ENST00000446231 SH2B2O14492 632 aaPredicted RBP8.57□□□□□ -1.04
SMG1-202ENST00000446231 SLC44A4Q53GD3 710 aa8.57□□□□□ -1.04
SMG1-202ENST00000446231 LONP1P36776 959 aaKnown RBP8.57□□□□□ -1.04
SMG1-202ENST00000446231 FAM192AQ9GZU8 254 aa8.57□□□□□ -1.04
SMG1-202ENST00000446231 PAPOLBQ9NRJ5 636 aaKnown RBP8.57□□□□□ -1.04
SMG1-202ENST00000446231 ZFP69BQ9UJL9 534 aa8.57□□□□□ -1.04
SMG1-202ENST00000446231 DBNLQ9UJU6 430 aaKnown RBP8.57□□□□□ -1.04
SMG1-202ENST00000446231 ARID1AO14497 2285 aa8.57□□□□□ -1.04
SMG1-202ENST00000446231 KLC1Q07866 573 aa8.57□□□□□ -1.04
SMG1-202ENST00000446231 ITIH4Q14624 930 aa8.57□□□□□ -1.04
SMG1-202ENST00000446231 KIFC2Q96AC6 838 aa8.57□□□□□ -1.04
SMG1-202ENST00000446231 FBXO31Q5XUX0 539 aaPredicted RBP8.57□□□□□ -1.04
SMG1-202ENST00000446231 IL17REQ8NFR9 667 aa8.57□□□□□ -1.04
SMG1-202ENST00000446231 CORO1CQ9ULV4 474 aaPredicted RBP8.57□□□□□ -1.04
SMG1-202ENST00000446231 ICA1Q05084 483 aa8.57□□□□□ -1.04
SMG1-202ENST00000446231 CDC37Q16543 378 aaPredicted RBP8.57□□□□□ -1.04
SMG1-202ENST00000446231 ACBD5Q5T8D3 534 aaPredicted RBP8.57□□□□□ -1.04
SMG1-202ENST00000446231 EPSTI1Q96J88 318 aa8.57□□□□□ -1.04
SMG1-202ENST00000446231 BAG3O95817 575 aa8.57□□□□□ -1.04
SMG1-202ENST00000446231 PLS3P13797 630 aa8.57□□□□□ -1.04
SMG1-202ENST00000446231 HSPA6P17066 643 aa8.57□□□□□ -1.04
SMG1-202ENST00000446231 SLC39A2Q9NP94 309 aa8.57□□□□□ -1.04
SMG1-202ENST00000446231 COPRSQ9NQ92 184 aa8.57□□□□□ -1.04
SMG1-202ENST00000446231 LRRIQ3A6PVS8 624 aaPredicted RBP8.56□□□□□ -1.04
SMG1-202ENST00000446231 HNRNPCP07910 306 aaKnown RBP eCLIP8.56□□□□□ -1.044e-6■■□□□ 14.2
SMG1-202ENST00000446231 NQO1P15559 274 aaKnown RBP8.56□□□□□ -1.04
SMG1-202ENST00000446231 MAN1A1P33908 653 aa8.56□□□□□ -1.04
SMG1-202ENST00000446231 RCN2Q14257 317 aa8.56□□□□□ -1.04
SMG1-202ENST00000446231 KCNB1Q14721 858 aa8.56□□□□□ -1.04
SMG1-202ENST00000446231 TTC26A0AVF1 554 aa8.56□□□□□ -1.04
SMG1-202ENST00000446231 AKNAD1Q5T1N1 836 aa8.56□□□□□ -1.04
SMG1-202ENST00000446231 ANAPC5Q9UJX4 755 aa8.56□□□□□ -1.04
SMG1-202ENST00000446231 CYP21A2P08686 494 aa8.56□□□□□ -1.04
SMG1-202ENST00000446231 SLC39A6Q13433 755 aa8.56□□□□□ -1.04
SMG1-202ENST00000446231 GRAMD4Q6IC98 578 aa8.56□□□□□ -1.04
SMG1-202ENST00000446231 METTL16Q86W50 562 aaKnown RBP8.56□□□□□ -1.04
SMG1-202ENST00000446231 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.56□□□□□ -1.042e-7■■■□□ 17.9
SMG1-202ENST00000446231 GYG2O15488 501 aa8.56□□□□□ -1.04
SMG1-202ENST00000446231 MT-ND3P03897 115 aa8.56□□□□□ -1.04
SMG1-202ENST00000446231 PTCH1Q13635 1447 aa8.56□□□□□ -1.04
SMG1-202ENST00000446231 TTC36A6NLP5 189 aa8.56□□□□□ -1.04
SMG1-202ENST00000446231 FMNL1O95466 1100 aaPredicted RBP8.56□□□□□ -1.04
SMG1-202ENST00000446231 POLR2FP61218 127 aaKnown RBP8.56□□□□□ -1.04
SMG1-202ENST00000446231 TPP2P29144 1249 aaPredicted RBP8.56□□□□□ -1.04
SMG1-202ENST00000446231 MIGA1Q8NAN2 632 aa8.56□□□□□ -1.04
SMG1-202ENST00000446231 NVLO15381 856 aaKnown RBP8.56□□□□□ -1.04
SMG1-202ENST00000446231 MYL1P05976 194 aa8.56□□□□□ -1.04
SMG1-202ENST00000446231 DEUP1Q05D60 604 aa8.56□□□□□ -1.04
SMG1-202ENST00000446231 PSMD6Q15008 389 aa8.56□□□□□ -1.04
SMG1-202ENST00000446231 USP15Q9Y4E8 981 aaPredicted RBP8.56□□□□□ -1.04
SMG1-202ENST00000446231 TRAPPC10P48553 1259 aa8.56□□□□□ -1.04
SMG1-202ENST00000446231 ENGASEQ8NFI3 743 aa8.56□□□□□ -1.04
SMG1-202ENST00000446231 IFT140Q96RY7 1462 aa8.56□□□□□ -1.04
SMG1-202ENST00000446231 NEURL1BA8MQ27 555 aa8.56□□□□□ -1.04
SMG1-202ENST00000446231 STAT1P42224 750 aa8.56□□□□□ -1.04
SMG1-202ENST00000446231 ANKRD20A8PQ5CZ79 823 aa8.56□□□□□ -1.04
SMG1-202ENST00000446231 AGBL2Q5U5Z8 902 aa8.56□□□□□ -1.04
SMG1-202ENST00000446231 C1orf146Q5VVC0 180 aa8.56□□□□□ -1.04
SMG1-202ENST00000446231 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.56□□□□□ -1.041e-7■■■■■ 58.1
SMG1-202ENST00000446231 CATSPER2Q96P56 530 aa8.56□□□□□ -1.04
SMG1-202ENST00000446231 ECEL1O95672 775 aa8.56□□□□□ -1.04
SMG1-202ENST00000446231 SPARCL1Q14515 664 aa8.56□□□□□ -1.04
SMG1-202ENST00000446231 TRPC6Q9Y210 931 aa8.56□□□□□ -1.04
SMG1-202ENST00000446231 SLC1A4P43007 532 aa8.56□□□□□ -1.04
SMG1-202ENST00000446231 GFPT1Q06210 699 aaPredicted RBP8.56□□□□□ -1.04
SMG1-202ENST00000446231 CHN1P15882 459 aa8.56□□□□□ -1.04
SMG1-202ENST00000446231 NELFCDQ8IXH7 590 aa8.56□□□□□ -1.04
SMG1-202ENST00000446231 RAPGEF5Q92565 580 aa8.56□□□□□ -1.04
SMG1-202ENST00000446231 SHC4Q6S5L8 630 aa8.56□□□□□ -1.04
SMG1-202ENST00000446231 TMTC3Q6ZXV5 915 aa8.56□□□□□ -1.04
SMG1-202ENST00000446231 ANKRD2Q9GZV1 360 aa8.56□□□□□ -1.04
SMG1-202ENST00000446231 LIMA1Q9UHB6 759 aaKnown RBP8.56□□□□□ -1.04
SMG1-202ENST00000446231 FOXN1O15353 648 aa8.55□□□□□ -1.04
SMG1-202ENST00000446231 SCINQ9Y6U3 715 aa8.55□□□□□ -1.04
SMG1-202ENST00000446231 PRR29P0C7W0 189 aa8.55□□□□□ -1.04
SMG1-202ENST00000446231 ZNF594Q96JF6 807 aaPredicted RBP8.55□□□□□ -1.04
SMG1-202ENST00000446231 XAB2Q9HCS7 855 aaKnown RBP8.55□□□□□ -1.04
SMG1-202ENST00000446231 RHBDL2Q9NX52 303 aa8.55□□□□□ -1.04
SMG1-202ENST00000446231 ARHGEF18Q6ZSZ5 1173 aa8.55□□□□□ -1.04
SMG1-202ENST00000446231 CCDC89Q8N998 374 aa8.55□□□□□ -1.04
SMG1-202ENST00000446231 ORC4O43929 436 aa8.55□□□□□ -1.04
SMG1-202ENST00000446231 ADORA1P30542 326 aa8.55□□□□□ -1.04
SMG1-202ENST00000446231 CCNHP51946 323 aaPredicted RBP8.55□□□□□ -1.04
SMG1-202ENST00000446231 TRIP13Q15645 432 aaPredicted RBP8.55□□□□□ -1.04
SMG1-202ENST00000446231 CYP4F22Q6NT55 531 aa8.55□□□□□ -1.04
SMG1-202ENST00000446231 TRIM42Q8IWZ5 723 aa8.55□□□□□ -1.04
SMG1-202ENST00000446231 CRACR2BQ8N4Y2 399 aaPredicted RBP8.55□□□□□ -1.04
SMG1-202ENST00000446231 KCNB2Q92953 911 aa8.55□□□□□ -1.04
SMG1-202ENST00000446231 SIKE1Q9BRV8 207 aa8.55□□□□□ -1.04
SMG1-202ENST00000446231 NDC80O14777 642 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms