RNA–Protein interactions for RNA: ENST00000445644.5

COMMD1-204, Transcript of copper metabolism domain containing 1, humanhuman

TSL 4

Gene COMMD1, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-204ENST00000445644 CDC45O75419 566 aa21.84■■□□□ 1.09
COMMD1-204ENST00000445644 EPHB4P54760 987 aa21.84■■□□□ 1.09
COMMD1-204ENST00000445644 PSMC6P62333 389 aa21.84■■□□□ 1.09
COMMD1-204ENST00000445644 CASC1Q6TDU7 716 aa21.84■■□□□ 1.09
COMMD1-204ENST00000445644 VTI1AQ96AJ9 217 aa21.84■■□□□ 1.09
COMMD1-204ENST00000445644 RMDN3Q96TC7 470 aa21.84■■□□□ 1.09
COMMD1-204ENST00000445644 MAP3K14Q99558 947 aa21.84■■□□□ 1.09
COMMD1-204ENST00000445644 LRRC2Q9BYS8 371 aa21.84■■□□□ 1.09
COMMD1-204ENST00000445644 PCDHA1Q9Y5I3 950 aa21.84■■□□□ 1.09
COMMD1-204ENST00000445644 MROH7Q68CQ1 1323 aa21.83■■□□□ 1.09
COMMD1-204ENST00000445644 DCDC2CA8MYV0 355 aa21.83■■□□□ 1.09
COMMD1-204ENST00000445644 DDAH1O94760 285 aa21.83■■□□□ 1.09
COMMD1-204ENST00000445644 CD4P01730 458 aa21.83■■□□□ 1.09
COMMD1-204ENST00000445644 EIF2AK2P19525 551 aaKnown RBP21.83■■□□□ 1.09
COMMD1-204ENST00000445644 SHHQ15465 462 aa21.83■■□□□ 1.09
COMMD1-204ENST00000445644 CCDC62Q6P9F0 684 aa21.83■■□□□ 1.09
COMMD1-204ENST00000445644 OR6J1Q8NGC5 347 aa21.83■■□□□ 1.09
COMMD1-204ENST00000445644 NSUN6Q8TEA1 469 aaKnown RBP21.83■■□□□ 1.09
COMMD1-204ENST00000445644 SCFD2Q8WU76 684 aa21.83■■□□□ 1.09
COMMD1-204ENST00000445644 TMEM87BQ96K49 555 aa21.83■■□□□ 1.09
COMMD1-204ENST00000445644 MPHOSPH6Q99547 160 aaKnown RBP21.83■■□□□ 1.09
COMMD1-204ENST00000445644 PXMP2Q9NR77 195 aa21.83■■□□□ 1.09
COMMD1-204ENST00000445644 PNMA6FA0A0J9YX94 578 aa21.82■■□□□ 1.08
COMMD1-204ENST00000445644 RXRAP19793 462 aa21.82■■□□□ 1.08
COMMD1-204ENST00000445644 ITGA7Q13683 1181 aa21.82■■□□□ 1.08
COMMD1-204ENST00000445644 PPP2R5BQ15173 497 aa21.82■■□□□ 1.08
COMMD1-204ENST00000445644 RASEFQ8IZ41 740 aa21.82■■□□□ 1.08
COMMD1-204ENST00000445644 DOCK5Q9H7D0 1870 aa21.81■■□□□ 1.08
COMMD1-204ENST00000445644 CABYRO75952 493 aa21.81■■□□□ 1.08
COMMD1-204ENST00000445644 PLEKHA8P1O95397 391 aa21.81■■□□□ 1.08
COMMD1-204ENST00000445644 TXNP10599 105 aaKnown RBP21.81■■□□□ 1.08
COMMD1-204ENST00000445644 RAG1P15918 1043 aa21.81■■□□□ 1.08
COMMD1-204ENST00000445644 HOXA13P31271 388 aaPredicted RBP21.81■■□□□ 1.08
COMMD1-204ENST00000445644 LIFRP42702 1097 aa21.81■■□□□ 1.08
COMMD1-204ENST00000445644 PURAQ00577 322 aaKnown RBP21.81■■□□□ 1.08
COMMD1-204ENST00000445644 RAB11FIP4Q86YS3 637 aa21.81■■□□□ 1.08
COMMD1-204ENST00000445644 PIBF1Q8WXW3 757 aa21.81■■□□□ 1.08
COMMD1-204ENST00000445644 IWS1Q96ST2 819 aa21.81■■□□□ 1.08
COMMD1-204ENST00000445644 SPZ1Q9BXG8 430 aa21.81■■□□□ 1.08
COMMD1-204ENST00000445644 B4DLN1 442 aa21.8■■□□□ 1.08
COMMD1-204ENST00000445644 NKRFO15226 690 aaKnown RBP eCLIP21.8■■□□□ 1.08
COMMD1-204ENST00000445644 ZEB2O60315 1214 aa21.8■■□□□ 1.08
COMMD1-204ENST00000445644 TIMP1P01033 207 aa21.8■■□□□ 1.08
COMMD1-204ENST00000445644 MRPL12P52815 198 aaKnown RBP21.8■■□□□ 1.08
COMMD1-204ENST00000445644 STXBP2Q15833 593 aa21.8■■□□□ 1.08
COMMD1-204ENST00000445644 ADCK5Q3MIX3 580 aa21.8■■□□□ 1.08
COMMD1-204ENST00000445644 ARHGEF16Q5VV41 709 aa21.8■■□□□ 1.08
COMMD1-204ENST00000445644 CMTR1Q8N1G2 835 aaKnown RBP21.8■■□□□ 1.08
COMMD1-204ENST00000445644 SRBD1Q8N5C6 995 aaKnown RBP21.8■■□□□ 1.08
COMMD1-204ENST00000445644 IL31RAQ8NI17 732 aa21.8■■□□□ 1.08
COMMD1-204ENST00000445644 COL6A3P12111 3177 aa21.79■■□□□ 1.08
COMMD1-204ENST00000445644 CCDC69A6NI79 296 aa21.79■■□□□ 1.08
COMMD1-204ENST00000445644 A6NJR5 290 aa21.79■■□□□ 1.08
COMMD1-204ENST00000445644 B4GALT4O60513 344 aa21.79■■□□□ 1.08
COMMD1-204ENST00000445644 RGS20O76081 388 aa21.79■■□□□ 1.08
COMMD1-204ENST00000445644 NR3C2P08235 984 aa21.79■■□□□ 1.08
COMMD1-204ENST00000445644 CPT1AP50416 773 aa21.79■■□□□ 1.08
COMMD1-204ENST00000445644 TTLL4Q14679 1199 aa21.79■■□□□ 1.08
COMMD1-204ENST00000445644 LY6KQ17RY6 165 aa21.79■■□□□ 1.08
COMMD1-204ENST00000445644 NFXL1Q6ZNB6 911 aa21.79■■□□□ 1.08
COMMD1-204ENST00000445644 SEPT14Q6ZU15 432 aa21.79■■□□□ 1.08
COMMD1-204ENST00000445644 CTCFLQ8NI51 663 aaPredicted RBP21.79■■□□□ 1.08
COMMD1-204ENST00000445644 PDCD2LQ9BRP1 358 aa21.79■■□□□ 1.08
COMMD1-204ENST00000445644 MAP3K20Q9NYL2 800 aaKnown RBP21.79■■□□□ 1.08
COMMD1-204ENST00000445644 MYL3P08590 195 aa21.78■■□□□ 1.08
COMMD1-204ENST00000445644 EXOSC10Q01780 885 aaKnown RBP21.78■■□□□ 1.08
COMMD1-204ENST00000445644 ARHGAP1Q07960 439 aa21.78■■□□□ 1.08
COMMD1-204ENST00000445644 TSGA10IPQ3SY00 556 aa21.78■■□□□ 1.08
COMMD1-204ENST00000445644 GPR153Q6NV75 609 aa21.78■■□□□ 1.08
COMMD1-204ENST00000445644 Q7L0L9 218 aa21.78■■□□□ 1.08
COMMD1-204ENST00000445644 TMTC2Q8N394 836 aa21.78■■□□□ 1.08
COMMD1-204ENST00000445644 PPP1R13LQ8WUF5 828 aa21.78■■□□□ 1.08
COMMD1-204ENST00000445644 TCEANC2Q96MN5 208 aa21.78■■□□□ 1.08
COMMD1-204ENST00000445644 TRPV6Q9H1D0 765 aa21.78■■□□□ 1.08
COMMD1-204ENST00000445644 POLR3EQ9NVU0 708 aa21.78■■□□□ 1.08
COMMD1-204ENST00000445644 CDH23Q9H251 3354 aa21.78■■□□□ 1.08
COMMD1-204ENST00000445644 UMODL1Q5DID0 1318 aa21.78■■□□□ 1.08
COMMD1-204ENST00000445644 TANC1Q9C0D5 1861 aa21.77■■□□□ 1.08
COMMD1-204ENST00000445644 SMARCA1P28370 1054 aa21.77■■□□□ 1.08
COMMD1-204ENST00000445644 FPGSQ05932 587 aa21.77■■□□□ 1.08
COMMD1-204ENST00000445644 PGM5Q15124 567 aa21.77■■□□□ 1.08
COMMD1-204ENST00000445644 RNF20Q5VTR2 975 aa21.77■■□□□ 1.08
COMMD1-204ENST00000445644 SGMS1Q86VZ5 419 aa21.77■■□□□ 1.08
COMMD1-204ENST00000445644 SAMD3Q8N6K7 520 aa21.77■■□□□ 1.08
COMMD1-204ENST00000445644 NEK1Q96PY6 1258 aa21.77■■□□□ 1.08
COMMD1-204ENST00000445644 PPP1R12CQ9BZL4 782 aa21.77■■□□□ 1.08
COMMD1-204ENST00000445644 GCOM1H8Y6P7 765 aaPredicted RBP21.76■■□□□ 1.07
COMMD1-204ENST00000445644 TLR3O15455 904 aaKnown RBP21.76■■□□□ 1.07
COMMD1-204ENST00000445644 EIF3JO75822 258 aaKnown RBP21.76■■□□□ 1.07
COMMD1-204ENST00000445644 POLR2MP0CAP2 368 aa21.76■■□□□ 1.07
COMMD1-204ENST00000445644 KIF5BP33176 963 aa21.76■■□□□ 1.07
COMMD1-204ENST00000445644 SCN5AQ14524 2016 aa21.76■■□□□ 1.07
COMMD1-204ENST00000445644 MFSD5Q6N075 450 aa21.76■■□□□ 1.07
COMMD1-204ENST00000445644 ZFP91Q96JP5 570 aaPredicted RBP21.76■■□□□ 1.07
COMMD1-204ENST00000445644 MTG1Q9BT17 334 aaPredicted RBP21.76■■□□□ 1.07
COMMD1-204ENST00000445644 DDX41Q9UJV9 622 aaKnown RBP21.76■■□□□ 1.07
COMMD1-204ENST00000445644 FRMPD4Q14CM0 1322 aa21.76■■□□□ 1.07
COMMD1-204ENST00000445644 MMP3P08254 477 aa21.75■■□□□ 1.07
COMMD1-204ENST00000445644 MYCLP12524 364 aaPredicted RBP21.75■■□□□ 1.07
COMMD1-204ENST00000445644 CYP2C18P33260 490 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms