RNA–Protein interactions for RNA: ENST00000444415.7

TRAF4-205, Transcript of TNF receptor associated factor 4, humanhuman

TSL 5 BASIC

Gene TRAF4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-205ENST00000444415 RTN1Q16799 776 aa25.26■■□□□ 1.63
TRAF4-205ENST00000444415 IQSEC1Q6DN90 963 aa25.26■■□□□ 1.63
TRAF4-205ENST00000444415 RUFY3Q7L099 469 aa25.26■■□□□ 1.63
TRAF4-205ENST00000444415 TLK2Q86UE8 772 aa25.26■■□□□ 1.63
TRAF4-205ENST00000444415 A0A1W2PQ45 241 aaPredicted RBP25.25■■□□□ 1.63
TRAF4-205ENST00000444415 A0A1W2PQY0 241 aa25.25■■□□□ 1.63
TRAF4-205ENST00000444415 GOLGA8AA7E2F4 631 aa25.25■■□□□ 1.63
TRAF4-205ENST00000444415 GOLGA8BA8MQT2 603 aa25.25■■□□□ 1.63
TRAF4-205ENST00000444415 ARIH2O95376 493 aa25.25■■□□□ 1.63
TRAF4-205ENST00000444415 C6orf222P0C671 652 aaPredicted RBP25.25■■□□□ 1.63
TRAF4-205ENST00000444415 EIF2AK2P19525 551 aaKnown RBP25.25■■□□□ 1.63
TRAF4-205ENST00000444415 PSMA5P28066 241 aa25.25■■□□□ 1.63
TRAF4-205ENST00000444415 RCAN1P53805 252 aa25.25■■□□□ 1.63
TRAF4-205ENST00000444415 SLC39A5Q6ZMH5 540 aa25.25■■□□□ 1.63
TRAF4-205ENST00000444415 IL31RAQ8NI17 732 aa25.25■■□□□ 1.63
TRAF4-205ENST00000444415 NSUN6Q8TEA1 469 aaKnown RBP25.25■■□□□ 1.63
TRAF4-205ENST00000444415 RBM28Q9NW13 759 aaKnown RBP25.25■■□□□ 1.63
TRAF4-205ENST00000444415 MAP3K20Q9NYL2 800 aaKnown RBP25.25■■□□□ 1.63
TRAF4-205ENST00000444415 ACLYP53396 1101 aa25.24■■□□□ 1.63
TRAF4-205ENST00000444415 BEX3Q00994 111 aa25.24■■□□□ 1.63
TRAF4-205ENST00000444415 DUSP28Q4G0W2 176 aa25.24■■□□□ 1.63
TRAF4-205ENST00000444415 SYNE3Q6ZMZ3 975 aa25.24■■□□□ 1.63
TRAF4-205ENST00000444415 TSEN34Q9BSV6 310 aaKnown RBP25.24■■□□□ 1.63
TRAF4-205ENST00000444415 WDR11Q9BZH6 1224 aa25.24■■□□□ 1.63
TRAF4-205ENST00000444415 UPF3BQ9BZI7 483 aaKnown RBP25.24■■□□□ 1.63
TRAF4-205ENST00000444415 TM6SF1Q9BZW5 370 aa25.24■■□□□ 1.63
TRAF4-205ENST00000444415 ADD1P35611 737 aaKnown RBP25.23■■□□□ 1.63
TRAF4-205ENST00000444415 EVCP57679 992 aa25.23■■□□□ 1.63
TRAF4-205ENST00000444415 RTP1P59025 263 aa25.23■■□□□ 1.63
TRAF4-205ENST00000444415 TYW1BQ6NUM6 668 aa25.23■■□□□ 1.63
TRAF4-205ENST00000444415 SAMD3Q8N6K7 520 aa25.23■■□□□ 1.63
TRAF4-205ENST00000444415 IWS1Q96ST2 819 aa25.23■■□□□ 1.63
TRAF4-205ENST00000444415 PDCD2LQ9BRP1 358 aa25.23■■□□□ 1.63
TRAF4-205ENST00000444415 SEC63Q9UGP8 760 aaKnown RBP25.23■■□□□ 1.63
TRAF4-205ENST00000444415 NR2E3Q9Y5X4 410 aa25.23■■□□□ 1.63
TRAF4-205ENST00000444415 TRIOBPQ9H2D6 2365 aa25.23■■□□□ 1.63
TRAF4-205ENST00000444415 FRMPD4Q14CM0 1322 aa25.23■■□□□ 1.63
TRAF4-205ENST00000444415 LTBP2Q14767 1821 aa25.22■■□□□ 1.63
TRAF4-205ENST00000444415 GCOM1H8Y6P7 765 aaPredicted RBP25.22■■□□□ 1.63
TRAF4-205ENST00000444415 MEIS2O14770 477 aa25.22■■□□□ 1.63
TRAF4-205ENST00000444415 RGS20O76081 388 aa25.22■■□□□ 1.63
TRAF4-205ENST00000444415 POLR2MP0CAP2 368 aa25.22■■□□□ 1.63
TRAF4-205ENST00000444415 TRAF1Q13077 416 aa25.22■■□□□ 1.63
TRAF4-205ENST00000444415 COPS5Q92905 334 aa25.22■■□□□ 1.63
TRAF4-205ENST00000444415 GPKOWQ92917 476 aaPredicted RBP eCLIP25.22■■□□□ 1.63
TRAF4-205ENST00000444415 ZMYND8Q9ULU4 1186 aaPredicted RBP25.22■■□□□ 1.63
TRAF4-205ENST00000444415 MOXD2PA6NHM9 499 aa25.21■■□□□ 1.63
TRAF4-205ENST00000444415 DYNC1LI2O43237 492 aaPredicted RBP25.21■■□□□ 1.63
TRAF4-205ENST00000444415 ASGR1P07306 291 aa25.21■■□□□ 1.63
TRAF4-205ENST00000444415 NR3C2P08235 984 aa25.21■■□□□ 1.63
TRAF4-205ENST00000444415 C1orf53Q5VUE5 145 aa25.21■■□□□ 1.63
TRAF4-205ENST00000444415 ARHGEF16Q5VV41 709 aa25.21■■□□□ 1.63
TRAF4-205ENST00000444415 CCDC62Q6P9F0 684 aa25.21■■□□□ 1.63
TRAF4-205ENST00000444415 USP17L6PQ6QN14 398 aa25.21■■□□□ 1.63
TRAF4-205ENST00000444415 PRO3102Q9H379 93 aa25.21■■□□□ 1.63
TRAF4-205ENST00000444415 Q9Y3F1 56 aa25.21■■□□□ 1.63
TRAF4-205ENST00000444415 SYN1P17600 705 aa25.21■■□□□ 1.63
TRAF4-205ENST00000444415 METAP2P50579 478 aaKnown RBP eCLIP25.21■■□□□ 1.63
TRAF4-205ENST00000444415 FGD1P98174 961 aa25.21■■□□□ 1.63
TRAF4-205ENST00000444415 PGM5Q15124 567 aa25.21■■□□□ 1.63
TRAF4-205ENST00000444415 TRIM60Q495X7 471 aa25.21■■□□□ 1.63
TRAF4-205ENST00000444415 GNASQ5JWF2 1037 aa25.21■■□□□ 1.63
TRAF4-205ENST00000444415 WWC2Q6AWC2 1192 aa25.21■■□□□ 1.63
TRAF4-205ENST00000444415 NOL8Q76FK4 1167 aaKnown RBP25.21■■□□□ 1.63
TRAF4-205ENST00000444415 FCHSD1Q86WN1 690 aa25.21■■□□□ 1.63
TRAF4-205ENST00000444415 IL17RAQ96F46 866 aa25.21■■□□□ 1.63
TRAF4-205ENST00000444415 FSCN1Q16658 493 aaKnown RBP25.2■■□□□ 1.62
TRAF4-205ENST00000444415 SCFD2Q8WU76 684 aa25.2■■□□□ 1.62
TRAF4-205ENST00000444415 MPHOSPH6Q99547 160 aaKnown RBP25.2■■□□□ 1.62
TRAF4-205ENST00000444415 MYH7BA7E2Y1 1941 aa25.19■■□□□ 1.62
TRAF4-205ENST00000444415 PIK3CDO00329 1044 aa25.19■■□□□ 1.62
TRAF4-205ENST00000444415 PDIA3P30101 505 aaKnown RBP25.19■■□□□ 1.62
TRAF4-205ENST00000444415 STXBP2Q15833 593 aa25.19■■□□□ 1.62
TRAF4-205ENST00000444415 NTRK3Q16288 839 aa25.19■■□□□ 1.62
TRAF4-205ENST00000444415 C8orf34Q49A92 452 aa25.19■■□□□ 1.62
TRAF4-205ENST00000444415 ZFP91Q96JP5 570 aaPredicted RBP25.19■■□□□ 1.62
TRAF4-205ENST00000444415 LARP6Q9BRS8 491 aaKnown RBP25.19■■□□□ 1.62
TRAF4-205ENST00000444415 SPC25Q9HBM1 224 aa25.19■■□□□ 1.62
TRAF4-205ENST00000444415 NAP1L2Q9ULW6 460 aaPredicted RBP25.19■■□□□ 1.62
TRAF4-205ENST00000444415 COLQQ9Y215 455 aaPredicted RBP25.19■■□□□ 1.62
TRAF4-205ENST00000444415 CYP46A1Q9Y6A2 500 aa25.19■■□□□ 1.62
TRAF4-205ENST00000444415 PPP2R5BQ15173 497 aa25.18■■□□□ 1.62
TRAF4-205ENST00000444415 SEPT14Q6ZU15 432 aa25.18■■□□□ 1.62
TRAF4-205ENST00000444415 VSIG10LQ86VR7 867 aa25.18■■□□□ 1.62
TRAF4-205ENST00000444415 PCSK9Q8NBP7 692 aaKnown RBP25.18■■□□□ 1.62
TRAF4-205ENST00000444415 ATP11BQ9Y2G3 1177 aa25.18■■□□□ 1.62
TRAF4-205ENST00000444415 V9GY48 417 aaPredicted RBP25.18■■□□□ 1.62
TRAF4-205ENST00000444415 SCN10AQ9Y5Y9 1956 aa25.18■■□□□ 1.62
TRAF4-205ENST00000444415 B4DLN1 442 aa25.17■■□□□ 1.62
TRAF4-205ENST00000444415 MRPL12P52815 198 aaKnown RBP25.17■■□□□ 1.62
TRAF4-205ENST00000444415 CHRDL2Q6WN34 429 aa25.17■■□□□ 1.62
TRAF4-205ENST00000444415 HEATR3Q7Z4Q2 680 aa25.17■■□□□ 1.62
TRAF4-205ENST00000444415 STARD7Q9NQZ5 370 aa25.17■■□□□ 1.62
TRAF4-205ENST00000444415 DOCK5Q9H7D0 1870 aa25.17■■□□□ 1.62
TRAF4-205ENST00000444415 STXBP3O00186 592 aa25.16■■□□□ 1.62
TRAF4-205ENST00000444415 EIF3JO75822 258 aaKnown RBP25.16■■□□□ 1.62
TRAF4-205ENST00000444415 TXNP10599 105 aaKnown RBP25.16■■□□□ 1.62
TRAF4-205ENST00000444415 MYCLP12524 364 aaPredicted RBP25.16■■□□□ 1.62
TRAF4-205ENST00000444415 MRPS9P82933 396 aaKnown RBP25.16■■□□□ 1.62
TRAF4-205ENST00000444415 UBE2SQ16763 222 aa25.16■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms