RNA–Protein interactions for RNA: ENST00000443780.5

UBE2D4-205, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-205ENST00000443780 MROH7Q68CQ1 1323 aa23.67■■□□□ 1.38
UBE2D4-205ENST00000443780 PNMA6FA0A0J9YX94 578 aa23.67■■□□□ 1.38
UBE2D4-205ENST00000443780 ARVCFO00192 962 aa23.67■■□□□ 1.38
UBE2D4-205ENST00000443780 ZEB2O60315 1214 aa23.67■■□□□ 1.38
UBE2D4-205ENST00000443780 CABYRO75952 493 aa23.67■■□□□ 1.38
UBE2D4-205ENST00000443780 LIFRP42702 1097 aa23.67■■□□□ 1.38
UBE2D4-205ENST00000443780 HSD17B4P51659 736 aa23.67■■□□□ 1.38
UBE2D4-205ENST00000443780 NFXL1Q6ZNB6 911 aa23.67■■□□□ 1.38
UBE2D4-205ENST00000443780 CTCFLQ8NI51 663 aaPredicted RBP23.67■■□□□ 1.38
UBE2D4-205ENST00000443780 BADQ92934 168 aa23.67■■□□□ 1.38
UBE2D4-205ENST00000443780 IWS1Q96ST2 819 aa23.67■■□□□ 1.38
UBE2D4-205ENST00000443780 TMEM39AQ9NV64 488 aa23.67■■□□□ 1.38
UBE2D4-205ENST00000443780 CCDC69A6NI79 296 aa23.66■■□□□ 1.38
UBE2D4-205ENST00000443780 KIF5BP33176 963 aa23.66■■□□□ 1.38
UBE2D4-205ENST00000443780 PPP2R5BQ15173 497 aa23.66■■□□□ 1.38
UBE2D4-205ENST00000443780 LRIT3Q3SXY7 679 aa23.66■■□□□ 1.38
UBE2D4-205ENST00000443780 MAP3K20Q9NYL2 800 aaKnown RBP23.66■■□□□ 1.38
UBE2D4-205ENST00000443780 SZT2Q5T011 3432 aa23.66■■□□□ 1.38
UBE2D4-205ENST00000443780 NKRFO15226 690 aaKnown RBP eCLIP23.65■■□□□ 1.38
UBE2D4-205ENST00000443780 ITGB8P26012 769 aa23.65■■□□□ 1.38
UBE2D4-205ENST00000443780 ARHGEF16Q5VV41 709 aa23.65■■□□□ 1.38
UBE2D4-205ENST00000443780 SAMD3Q8N6K7 520 aa23.65■■□□□ 1.38
UBE2D4-205ENST00000443780 LRCH3Q96II8 777 aa23.65■■□□□ 1.38
UBE2D4-205ENST00000443780 SPZ1Q9BXG8 430 aa23.65■■□□□ 1.38
UBE2D4-205ENST00000443780 LRRC2Q9BYS8 371 aa23.65■■□□□ 1.38
UBE2D4-205ENST00000443780 SCN10AQ9Y5Y9 1956 aa23.65■■□□□ 1.38
UBE2D4-205ENST00000443780 LAMA3Q16787 3333 aa23.64■■□□□ 1.38
UBE2D4-205ENST00000443780 TXNP10599 105 aaKnown RBP23.64■■□□□ 1.37
UBE2D4-205ENST00000443780 RAG1P15918 1043 aa23.64■■□□□ 1.37
UBE2D4-205ENST00000443780 SMARCA1P28370 1054 aa23.64■■□□□ 1.37
UBE2D4-205ENST00000443780 TTLL4Q14679 1199 aa23.64■■□□□ 1.37
UBE2D4-205ENST00000443780 STXBP2Q15833 593 aa23.64■■□□□ 1.37
UBE2D4-205ENST00000443780 TSGA10IPQ3SY00 556 aa23.64■■□□□ 1.37
UBE2D4-205ENST00000443780 SLC43A3Q8NBI5 491 aa23.64■■□□□ 1.37
UBE2D4-205ENST00000443780 OR6J1Q8NGC5 347 aa23.64■■□□□ 1.37
UBE2D4-205ENST00000443780 NEK1Q96PY6 1258 aa23.64■■□□□ 1.37
UBE2D4-205ENST00000443780 PXMP2Q9NR77 195 aa23.64■■□□□ 1.37
UBE2D4-205ENST00000443780 EIF2AK2P19525 551 aaKnown RBP23.63■■□□□ 1.37
UBE2D4-205ENST00000443780 HOXA13P31271 388 aaPredicted RBP23.63■■□□□ 1.37
UBE2D4-205ENST00000443780 CPT1AP50416 773 aa23.63■■□□□ 1.37
UBE2D4-205ENST00000443780 SEPT14Q6ZU15 432 aa23.63■■□□□ 1.37
UBE2D4-205ENST00000443780 FAM126BQ8IXS8 530 aa23.63■■□□□ 1.37
UBE2D4-205ENST00000443780 RASEFQ8IZ41 740 aa23.63■■□□□ 1.37
UBE2D4-205ENST00000443780 PIBF1Q8WXW3 757 aa23.63■■□□□ 1.37
UBE2D4-205ENST00000443780 COPS5Q92905 334 aa23.63■■□□□ 1.37
UBE2D4-205ENST00000443780 LZTS2Q9BRK4 669 aa23.63■■□□□ 1.37
UBE2D4-205ENST00000443780 TBX21Q9UL17 535 aa23.63■■□□□ 1.37
UBE2D4-205ENST00000443780 GRIN2DO15399 1336 aa23.62■■□□□ 1.37
UBE2D4-205ENST00000443780 ARIH2O95376 493 aa23.62■■□□□ 1.37
UBE2D4-205ENST00000443780 NR3C2P08235 984 aa23.62■■□□□ 1.37
UBE2D4-205ENST00000443780 CALM1P0DP23 149 aa23.62■■□□□ 1.37
UBE2D4-205ENST00000443780 CALM2P0DP24 149 aa23.62■■□□□ 1.37
UBE2D4-205ENST00000443780 CALM3P0DP25 149 aa23.62■■□□□ 1.37
UBE2D4-205ENST00000443780 GNAQP50148 359 aa23.62■■□□□ 1.37
UBE2D4-205ENST00000443780 ITGA7Q13683 1181 aa23.62■■□□□ 1.37
UBE2D4-205ENST00000443780 CCDC62Q6P9F0 684 aa23.62■■□□□ 1.37
UBE2D4-205ENST00000443780 SGMS1Q86VZ5 419 aa23.62■■□□□ 1.37
UBE2D4-205ENST00000443780 RRP36Q96EU6 259 aaKnown RBP23.62■■□□□ 1.37
UBE2D4-205ENST00000443780 POLR3EQ9NVU0 708 aa23.62■■□□□ 1.37
UBE2D4-205ENST00000443780 SLC12A7Q9Y666 1083 aa23.62■■□□□ 1.37
UBE2D4-205ENST00000443780 GCOM1H8Y6P7 765 aaPredicted RBP23.61■■□□□ 1.37
UBE2D4-205ENST00000443780 TLR3O15455 904 aaKnown RBP23.61■■□□□ 1.37
UBE2D4-205ENST00000443780 EIF3JO75822 258 aaKnown RBP23.61■■□□□ 1.37
UBE2D4-205ENST00000443780 PLEKHA8P1O95397 391 aa23.61■■□□□ 1.37
UBE2D4-205ENST00000443780 POLR2MP0CAP2 368 aa23.61■■□□□ 1.37
UBE2D4-205ENST00000443780 RXRAP19793 462 aa23.61■■□□□ 1.37
UBE2D4-205ENST00000443780 EXOSC10Q01780 885 aaKnown RBP23.61■■□□□ 1.37
UBE2D4-205ENST00000443780 SRBD1Q8N5C6 995 aaKnown RBP23.61■■□□□ 1.37
UBE2D4-205ENST00000443780 SEZ6LQ9BYH1 1024 aa23.61■■□□□ 1.37
UBE2D4-205ENST00000443780 A6NJR5 290 aa23.6■■□□□ 1.37
UBE2D4-205ENST00000443780 TIMP1P01033 207 aa23.6■■□□□ 1.37
UBE2D4-205ENST00000443780 CD4P01730 458 aa23.6■■□□□ 1.37
UBE2D4-205ENST00000443780 MYL3P08590 195 aa23.6■■□□□ 1.37
UBE2D4-205ENST00000443780 PSMC6P62333 389 aa23.6■■□□□ 1.37
UBE2D4-205ENST00000443780 PURAQ00577 322 aaKnown RBP23.6■■□□□ 1.37
UBE2D4-205ENST00000443780 KRT32Q14532 448 aa23.6■■□□□ 1.37
UBE2D4-205ENST00000443780 ADCK5Q3MIX3 580 aa23.6■■□□□ 1.37
UBE2D4-205ENST00000443780 BRDTQ58F21 947 aaPredicted RBP23.6■■□□□ 1.37
UBE2D4-205ENST00000443780 DHX32Q7L7V1 743 aaKnown RBP23.6■■□□□ 1.37
UBE2D4-205ENST00000443780 RAB11FIP4Q86YS3 637 aa23.6■■□□□ 1.37
UBE2D4-205ENST00000443780 PDCD2LQ9BRP1 358 aa23.6■■□□□ 1.37
UBE2D4-205ENST00000443780 SHHQ15465 462 aa23.59■■□□□ 1.37
UBE2D4-205ENST00000443780 CMTR1Q8N1G2 835 aaKnown RBP23.59■■□□□ 1.37
UBE2D4-205ENST00000443780 FANCBQ8NB91 859 aa23.59■■□□□ 1.37
UBE2D4-205ENST00000443780 SEC63Q9UGP8 760 aaKnown RBP23.59■■□□□ 1.37
UBE2D4-205ENST00000443780 MYCLP12524 364 aaPredicted RBP23.58■■□□□ 1.37
UBE2D4-205ENST00000443780 FPGSQ05932 587 aa23.58■■□□□ 1.37
UBE2D4-205ENST00000443780 PGM5Q15124 567 aa23.58■■□□□ 1.37
UBE2D4-205ENST00000443780 LY6KQ17RY6 165 aa23.58■■□□□ 1.37
UBE2D4-205ENST00000443780 C9orf50Q5SZB4 431 aa23.58■■□□□ 1.37
UBE2D4-205ENST00000443780 GPR153Q6NV75 609 aa23.58■■□□□ 1.37
UBE2D4-205ENST00000443780 FCHSD1Q86WN1 690 aa23.58■■□□□ 1.37
UBE2D4-205ENST00000443780 TCEANC2Q96MN5 208 aa23.58■■□□□ 1.37
UBE2D4-205ENST00000443780 MTG1Q9BT17 334 aaPredicted RBP23.58■■□□□ 1.37
UBE2D4-205ENST00000443780 DDX41Q9UJV9 622 aaKnown RBP23.58■■□□□ 1.37
UBE2D4-205ENST00000443780 KPNA6O60684 536 aa23.57■■□□□ 1.36
UBE2D4-205ENST00000443780 GH1P01241 217 aa23.57■■□□□ 1.36
UBE2D4-205ENST00000443780 EPHB4P54760 987 aa23.57■■□□□ 1.36
UBE2D4-205ENST00000443780 ARHGAP1Q07960 439 aa23.57■■□□□ 1.36
UBE2D4-205ENST00000443780 MFSD5Q6N075 450 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms