RNA–Protein interactions for RNA: ENST00000443621.1

LINC00393-201, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 282 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-201ENST00000443621 ANO3Q9BYT9 981 aa3.18□□□□□ -1.9
LINC00393-201ENST00000443621 EDEM3Q9BZQ6 932 aa3.18□□□□□ -1.9
LINC00393-201ENST00000443621 PDGFDQ9GZP0 370 aaPredicted RBP3.18□□□□□ -1.9
LINC00393-201ENST00000443621 C17orf75Q9HAS0 396 aa3.18□□□□□ -1.9
LINC00393-201ENST00000443621 SLC38A10Q9HBR0 1119 aa3.18□□□□□ -1.9
LINC00393-201ENST00000443621 CBX8Q9HC52 389 aa3.18□□□□□ -1.9
LINC00393-201ENST00000443621 TUFT1Q9NNX1 390 aa3.18□□□□□ -1.9
LINC00393-201ENST00000443621 ZCCHC17Q9NP64 241 aaKnown RBP3.18□□□□□ -1.9
LINC00393-201ENST00000443621 GJB4Q9NTQ9 266 aa3.18□□□□□ -1.9
LINC00393-201ENST00000443621 TBC1D22BQ9NU19 505 aa3.18□□□□□ -1.9
LINC00393-201ENST00000443621 SEL1LQ9UBV2 794 aa3.18□□□□□ -1.9
LINC00393-201ENST00000443621 LRWD1Q9UFC0 647 aa3.18□□□□□ -1.9
LINC00393-201ENST00000443621 FBXO40Q9UH90 709 aa3.18□□□□□ -1.9
LINC00393-201ENST00000443621 RWDD2AQ9UIY3 292 aa3.18□□□□□ -1.9
LINC00393-201ENST00000443621 HACL1Q9UJ83 578 aa3.18□□□□□ -1.9
LINC00393-201ENST00000443621 ZKSCAN5Q9Y2L8 839 aa3.18□□□□□ -1.9
LINC00393-201ENST00000443621 PCDHA5Q9Y5H7 936 aa3.18□□□□□ -1.9
LINC00393-201ENST00000443621 MYH7BA7E2Y1 1941 aa3.18□□□□□ -1.9
LINC00393-201ENST00000443621 ITIH6Q6UXX5 1313 aa3.18□□□□□ -1.9
LINC00393-201ENST00000443621 RPTORQ8N122 1335 aa3.18□□□□□ -1.9
LINC00393-201ENST00000443621 RLFQ13129 1914 aa3.17□□□□□ -1.9
LINC00393-201ENST00000443621 A0A0G2JMZ2 1700 aa3.17□□□□□ -1.9
LINC00393-201ENST00000443621 IGLV3-22A0A075B6J6 115 aa3.17□□□□□ -1.9
LINC00393-201ENST00000443621 A0A1W2PQC6 194 aa3.17□□□□□ -1.9
LINC00393-201ENST00000443621 GOLGA6L9A6NEM1 432 aa3.17□□□□□ -1.9
LINC00393-201ENST00000443621 TCP10L2B9ZVM9 353 aa3.17□□□□□ -1.9
LINC00393-201ENST00000443621 USP17L15C9J2P7 530 aa3.17□□□□□ -1.9
LINC00393-201ENST00000443621 USP17L13C9JLJ4 530 aa3.17□□□□□ -1.9
LINC00393-201ENST00000443621 USP17L11C9JVI0 530 aa3.17□□□□□ -1.9
LINC00393-201ENST00000443621 USP17L18D6R9N7 530 aa3.17□□□□□ -1.9
LINC00393-201ENST00000443621 USP17L22D6RA61 530 aa3.17□□□□□ -1.9
LINC00393-201ENST00000443621 USP17L17D6RBQ6 530 aa3.17□□□□□ -1.9
LINC00393-201ENST00000443621 USP17L19D6RCP7 530 aa3.17□□□□□ -1.9
LINC00393-201ENST00000443621 USP17L20D6RJB6 530 aa3.17□□□□□ -1.9
LINC00393-201ENST00000443621 PSMA7O14818 248 aa3.17□□□□□ -1.9
LINC00393-201ENST00000443621 PPP1R11O60927 126 aaPredicted RBP3.17□□□□□ -1.9
LINC00393-201ENST00000443621 ADCY5O95622 1261 aa3.17□□□□□ -1.9
LINC00393-201ENST00000443621 RPN1P04843 607 aaKnown RBP3.17□□□□□ -1.9
LINC00393-201ENST00000443621 GOLGA8HP0CJ92 632 aa3.17□□□□□ -1.9
LINC00393-201ENST00000443621 VEGFAP15692 232 aaPredicted RBP3.17□□□□□ -1.9
LINC00393-201ENST00000443621 GAP43P17677 238 aa3.17□□□□□ -1.9
LINC00393-201ENST00000443621 PTPRAP18433 802 aa3.17□□□□□ -1.9
LINC00393-201ENST00000443621 CCNE1P24864 410 aa3.17□□□□□ -1.9
LINC00393-201ENST00000443621 MCM7P33993 719 aa3.17□□□□□ -1.9
LINC00393-201ENST00000443621 STAT6P42226 847 aa3.17□□□□□ -1.9
LINC00393-201ENST00000443621 IREB2P48200 963 aaKnown RBP3.17□□□□□ -1.9
LINC00393-201ENST00000443621 MARSP56192 900 aaKnown RBP3.17□□□□□ -1.9
LINC00393-201ENST00000443621 TUBB4BP68371 445 aa3.17□□□□□ -1.9
LINC00393-201ENST00000443621 MAP3K9P80192 1104 aa3.17□□□□□ -1.9
LINC00393-201ENST00000443621 ARHGAP4P98171 946 aa3.17□□□□□ -1.9
LINC00393-201ENST00000443621 EVX2Q03828 476 aa3.17□□□□□ -1.9
LINC00393-201ENST00000443621 EHHADHQ08426 723 aa3.17□□□□□ -1.9
LINC00393-201ENST00000443621 SPIRE1Q08AE8 756 aa3.17□□□□□ -1.9
LINC00393-201ENST00000443621 USP17L24Q0WX57 530 aa3.17□□□□□ -1.9
LINC00393-201ENST00000443621 ARID5BQ14865 1188 aa3.17□□□□□ -1.9
LINC00393-201ENST00000443621 NR1I3Q14994 352 aa3.17□□□□□ -1.9
LINC00393-201ENST00000443621 NCAPHQ15003 741 aa3.17□□□□□ -1.9
LINC00393-201ENST00000443621 ZNF174Q15697 407 aa3.17□□□□□ -1.9
LINC00393-201ENST00000443621 CAMK4Q16566 473 aa3.17□□□□□ -1.9
LINC00393-201ENST00000443621 INF2Q27J81 1249 aa3.17□□□□□ -1.9
LINC00393-201ENST00000443621 LETM2Q2VYF4 491 aa3.17□□□□□ -1.9
LINC00393-201ENST00000443621 EDRF1Q3B7T1 1238 aa3.17□□□□□ -1.9
LINC00393-201ENST00000443621 FILIP1LQ4L180 1135 aa3.17□□□□□ -1.9
LINC00393-201ENST00000443621 TMEM119Q4V9L6 283 aa3.17□□□□□ -1.9
LINC00393-201ENST00000443621 NAALADL2Q58DX5 795 aa3.17□□□□□ -1.9
LINC00393-201ENST00000443621 FIGNQ5HY92 759 aa3.17□□□□□ -1.9
LINC00393-201ENST00000443621 EARS2Q5JPH6 523 aaKnown RBP3.17□□□□□ -1.9
LINC00393-201ENST00000443621 CDKAL1Q5VV42 579 aa3.17□□□□□ -1.9
LINC00393-201ENST00000443621 CENPPQ6IPU0 288 aa3.17□□□□□ -1.9
LINC00393-201ENST00000443621 CATSPERGQ6ZRH7 1159 aa3.17□□□□□ -1.9
LINC00393-201ENST00000443621 FAM43BQ6ZT52 329 aaPredicted RBP3.17□□□□□ -1.9
LINC00393-201ENST00000443621 STXBP4Q6ZWJ1 553 aa3.17□□□□□ -1.9
LINC00393-201ENST00000443621 UNC13DQ70J99 1090 aa3.17□□□□□ -1.9
LINC00393-201ENST00000443621 KCTD1Q719H9 257 aa3.17□□□□□ -1.9
LINC00393-201ENST00000443621 FASTKD5Q7L8L6 764 aaKnown RBP3.17□□□□□ -1.9
LINC00393-201ENST00000443621 CCDC84Q86UT8 332 aaPredicted RBP3.17□□□□□ -1.9
LINC00393-201ENST00000443621 CABP7Q86V35 215 aa3.17□□□□□ -1.9
LINC00393-201ENST00000443621 LDHDQ86WU2 507 aa3.17□□□□□ -1.9
LINC00393-201ENST00000443621 ERO1BQ86YB8 467 aa3.17□□□□□ -1.9
LINC00393-201ENST00000443621 RAB11FIP4Q86YS3 637 aa3.17□□□□□ -1.9
LINC00393-201ENST00000443621 FAM114A1Q8IWE2 563 aa3.17□□□□□ -1.9
LINC00393-201ENST00000443621 SULF1Q8IWU6 871 aa3.17□□□□□ -1.9
LINC00393-201ENST00000443621 DHX40Q8IX18 779 aaKnown RBP3.17□□□□□ -1.9
LINC00393-201ENST00000443621 CKAP2LQ8IYA6 745 aa3.17□□□□□ -1.9
LINC00393-201ENST00000443621 ANKRD13AQ8IZ07 590 aa3.17□□□□□ -1.9
LINC00393-201ENST00000443621 LRRC47Q8N1G4 583 aaKnown RBP3.17□□□□□ -1.9
LINC00393-201ENST00000443621 SYT2Q8N9I0 419 aaPredicted RBP3.17□□□□□ -1.9
LINC00393-201ENST00000443621 CCDC150Q8NCX0 1101 aa3.17□□□□□ -1.9
LINC00393-201ENST00000443621 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.17□□□□□ -1.9
LINC00393-201ENST00000443621 ETNPPLQ8TBG4 499 aa3.17□□□□□ -1.9
LINC00393-201ENST00000443621 LARP4BQ92615 738 aaKnown RBP3.17□□□□□ -1.9
LINC00393-201ENST00000443621 HAS1Q92839 578 aa3.17□□□□□ -1.9
LINC00393-201ENST00000443621 SLC5A5Q92911 643 aa3.17□□□□□ -1.9
LINC00393-201ENST00000443621 GPKOWQ92917 476 aaPredicted RBP eCLIP3.17□□□□□ -1.93e-7■□□□□ 9.9
LINC00393-201ENST00000443621 LENG9Q96B70 501 aa3.17□□□□□ -1.9
LINC00393-201ENST00000443621 DCPSQ96C86 337 aaKnown RBP3.17□□□□□ -1.9
LINC00393-201ENST00000443621 GPRASP2Q96D09 838 aa3.17□□□□□ -1.9
LINC00393-201ENST00000443621 CCDC51Q96ER9 411 aa3.17□□□□□ -1.9
LINC00393-201ENST00000443621 CDK5RAP3Q96JB5 506 aa3.17□□□□□ -1.9
LINC00393-201ENST00000443621 SENP7Q9BQF6 1050 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms