RNA–Protein interactions for RNA: ENST00000443187.1

PRKD3-203, Transcript of protein kinase D3, humanhuman

TSL 4

Gene PRKD3, Length 695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-203ENST00000443187 NOL8Q76FK4 1167 aaKnown RBP12.97□□□□□ -0.33
PRKD3-203ENST00000443187 MCF2L2Q86YR7 1114 aa12.97□□□□□ -0.33
PRKD3-203ENST00000443187 CCDC82Q8N4S0 544 aa12.97□□□□□ -0.33
PRKD3-203ENST00000443187 FANCBQ8NB91 859 aa12.97□□□□□ -0.33
PRKD3-203ENST00000443187 TRIM43Q96BQ3 446 aaPredicted RBP12.97□□□□□ -0.33
PRKD3-203ENST00000443187 ZFP91Q96JP5 570 aaPredicted RBP12.97□□□□□ -0.33
PRKD3-203ENST00000443187 JAKMIP1Q96N16 626 aaKnown RBP12.97□□□□□ -0.33
PRKD3-203ENST00000443187 RMDN3Q96TC7 470 aa12.97□□□□□ -0.33
PRKD3-203ENST00000443187 WDR11Q9BZH6 1224 aa12.97□□□□□ -0.33
PRKD3-203ENST00000443187 MAF1Q9H063 256 aa12.97□□□□□ -0.33
PRKD3-203ENST00000443187 PDLIM7Q9NR12 457 aa12.97□□□□□ -0.33
PRKD3-203ENST00000443187 PXMP2Q9NR77 195 aa12.97□□□□□ -0.33
PRKD3-203ENST00000443187 SLC12A7Q9Y666 1083 aa12.97□□□□□ -0.33
PRKD3-203ENST00000443187 LTBP2Q14767 1821 aa12.97□□□□□ -0.33
PRKD3-203ENST00000443187 MOXD2PA6NHM9 499 aa12.96□□□□□ -0.33
PRKD3-203ENST00000443187 RGS20O76081 388 aa12.96□□□□□ -0.33
PRKD3-203ENST00000443187 SMARCA1P28370 1054 aa12.96□□□□□ -0.33
PRKD3-203ENST00000443187 CDC27P30260 824 aa12.96□□□□□ -0.33
PRKD3-203ENST00000443187 KIF5BP33176 963 aa12.96□□□□□ -0.33
PRKD3-203ENST00000443187 FXR1P51114 621 aaKnown RBP eCLIP12.96□□□□□ -0.33
PRKD3-203ENST00000443187 MDM2Q00987 491 aaPredicted RBP12.96□□□□□ -0.33
PRKD3-203ENST00000443187 FSCN1Q16658 493 aaKnown RBP12.96□□□□□ -0.33
PRKD3-203ENST00000443187 CCDC62Q6P9F0 684 aa12.96□□□□□ -0.33
PRKD3-203ENST00000443187 CXCL17Q6UXB2 119 aa12.96□□□□□ -0.33
PRKD3-203ENST00000443187 NSUN6Q8TEA1 469 aaKnown RBP12.96□□□□□ -0.33
PRKD3-203ENST00000443187 USP26Q9BXU7 913 aa12.96□□□□□ -0.33
PRKD3-203ENST00000443187 STARD7Q9NQZ5 370 aa12.96□□□□□ -0.33
PRKD3-203ENST00000443187 LAMA2P24043 3122 aaKnown RBP12.95□□□□□ -0.34
PRKD3-203ENST00000443187 CNTNAP5Q8WYK1 1306 aa12.95□□□□□ -0.34
PRKD3-203ENST00000443187 KLF18A0A0U1RQI7 1052 aa12.95□□□□□ -0.34
PRKD3-203ENST00000443187 NR3C2P08235 984 aa12.95□□□□□ -0.34
PRKD3-203ENST00000443187 CDK7P50613 346 aa12.95□□□□□ -0.34
PRKD3-203ENST00000443187 APOBRQ0VD83 1088 aa12.95□□□□□ -0.34
PRKD3-203ENST00000443187 KRT32Q14532 448 aa12.95□□□□□ -0.34
PRKD3-203ENST00000443187 ARHGEF16Q5VV41 709 aa12.95□□□□□ -0.34
PRKD3-203ENST00000443187 Q6ZUG5 572 aa12.95□□□□□ -0.34
PRKD3-203ENST00000443187 RRP36Q96EU6 259 aaKnown RBP12.95□□□□□ -0.34
PRKD3-203ENST00000443187 LZTS2Q9BRK4 669 aa12.95□□□□□ -0.34
PRKD3-203ENST00000443187 PDCD2LQ9BRP1 358 aa12.95□□□□□ -0.34
PRKD3-203ENST00000443187 SPC25Q9HBM1 224 aa12.95□□□□□ -0.34
PRKD3-203ENST00000443187 Q9Y3F1 56 aa12.95□□□□□ -0.34
PRKD3-203ENST00000443187 GCOM1H8Y6P7 765 aaPredicted RBP12.94□□□□□ -0.34
PRKD3-203ENST00000443187 SOX1O00570 391 aaPredicted RBP12.94□□□□□ -0.34
PRKD3-203ENST00000443187 MEIS2O14770 477 aa12.94□□□□□ -0.34
PRKD3-203ENST00000443187 PQBP1O60828 265 aaKnown RBP12.94□□□□□ -0.34
PRKD3-203ENST00000443187 REC8O95072 547 aa12.94□□□□□ -0.34
PRKD3-203ENST00000443187 POLR2MP0CAP2 368 aa12.94□□□□□ -0.34
PRKD3-203ENST00000443187 CALM1P0DP23 149 aa12.94□□□□□ -0.34
PRKD3-203ENST00000443187 CALM2P0DP24 149 aa12.94□□□□□ -0.34
PRKD3-203ENST00000443187 CALM3P0DP25 149 aa12.94□□□□□ -0.34
PRKD3-203ENST00000443187 TXNP10599 105 aaKnown RBP12.94□□□□□ -0.34
PRKD3-203ENST00000443187 RPS6KB1P23443 525 aa12.94□□□□□ -0.34
PRKD3-203ENST00000443187 BMP8BP34820 402 aa12.94□□□□□ -0.34
PRKD3-203ENST00000443187 GNAQP50148 359 aa12.94□□□□□ -0.34
PRKD3-203ENST00000443187 PSMC6P62333 389 aa12.94□□□□□ -0.34
PRKD3-203ENST00000443187 FAAP100Q0VG06 881 aa12.94□□□□□ -0.34
PRKD3-203ENST00000443187 PGM5Q15124 567 aa12.94□□□□□ -0.34
PRKD3-203ENST00000443187 LY6KQ17RY6 165 aa12.94□□□□□ -0.34
PRKD3-203ENST00000443187 TYW1BQ6NUM6 668 aa12.94□□□□□ -0.34
PRKD3-203ENST00000443187 USP17L6PQ6QN14 398 aa12.94□□□□□ -0.34
PRKD3-203ENST00000443187 SEPT14Q6ZU15 432 aa12.94□□□□□ -0.34
PRKD3-203ENST00000443187 ANKRD33Q7Z3H0 272 aa12.94□□□□□ -0.34
PRKD3-203ENST00000443187 FCHSD1Q86WN1 690 aa12.94□□□□□ -0.34
PRKD3-203ENST00000443187 PCSK9Q8NBP7 692 aaKnown RBP12.94□□□□□ -0.34
PRKD3-203ENST00000443187 SCFD2Q8WU76 684 aa12.94□□□□□ -0.34
PRKD3-203ENST00000443187 PPP1R13LQ8WUF5 828 aa12.94□□□□□ -0.34
PRKD3-203ENST00000443187 GPKOWQ92917 476 aaPredicted RBP eCLIP12.94□□□□□ -0.34
PRKD3-203ENST00000443187 BRF1Q92994 677 aa12.94□□□□□ -0.34
PRKD3-203ENST00000443187 GLT1D1Q96MS3 346 aa12.94□□□□□ -0.34
PRKD3-203ENST00000443187 IWS1Q96ST2 819 aa12.94□□□□□ -0.34
PRKD3-203ENST00000443187 AGXT2Q9BYV1 514 aa12.94□□□□□ -0.34
PRKD3-203ENST00000443187 AP5M1Q9H0R1 490 aa12.94□□□□□ -0.34
PRKD3-203ENST00000443187 PRDM5Q9NQX1 630 aaPredicted RBP12.94□□□□□ -0.34
PRKD3-203ENST00000443187 KIAA1217Q5T5P2 1943 aa12.94□□□□□ -0.34
PRKD3-203ENST00000443187 ELP1O95163 1332 aa12.93□□□□□ -0.34
PRKD3-203ENST00000443187 FRMPD4Q14CM0 1322 aa12.93□□□□□ -0.34
PRKD3-203ENST00000443187 ZBTB43O43298 467 aa12.93□□□□□ -0.34
PRKD3-203ENST00000443187 MYCLP12524 364 aaPredicted RBP12.93□□□□□ -0.34
PRKD3-203ENST00000443187 CASTP20810 708 aaKnown RBP12.93□□□□□ -0.34
PRKD3-203ENST00000443187 ADD1P35611 737 aaKnown RBP12.93□□□□□ -0.34
PRKD3-203ENST00000443187 ARHGAP1Q07960 439 aa12.93□□□□□ -0.34
PRKD3-203ENST00000443187 PPP2R5BQ15173 497 aa12.93□□□□□ -0.34
PRKD3-203ENST00000443187 STXBP2Q15833 593 aa12.93□□□□□ -0.34
PRKD3-203ENST00000443187 BLOC1S2Q6QNY1 142 aa12.93□□□□□ -0.34
PRKD3-203ENST00000443187 VSIG10LQ86VR7 867 aa12.93□□□□□ -0.34
PRKD3-203ENST00000443187 SLC43A3Q8NBI5 491 aa12.93□□□□□ -0.34
PRKD3-203ENST00000443187 OR6J1Q8NGC5 347 aa12.93□□□□□ -0.34
PRKD3-203ENST00000443187 BCAS3Q9H6U6 928 aa12.93□□□□□ -0.34
PRKD3-203ENST00000443187 MAP3K20Q9NYL2 800 aaKnown RBP12.93□□□□□ -0.34
PRKD3-203ENST00000443187 A0A0U1RQG5 324 aaPredicted RBP12.92□□□□□ -0.34
PRKD3-203ENST00000443187 GOLGA8AA7E2F4 631 aa12.92□□□□□ -0.34
PRKD3-203ENST00000443187 GOLGA8BA8MQT2 603 aa12.92□□□□□ -0.34
PRKD3-203ENST00000443187 ARVCFO00192 962 aa12.92□□□□□ -0.34
PRKD3-203ENST00000443187 EIF3JO75822 258 aaKnown RBP12.92□□□□□ -0.34
PRKD3-203ENST00000443187 HMGB1P09429 215 aaKnown RBP12.92□□□□□ -0.34
PRKD3-203ENST00000443187 CLTBP09497 229 aa12.92□□□□□ -0.34
PRKD3-203ENST00000443187 MRPS9P82933 396 aaKnown RBP12.92□□□□□ -0.34
PRKD3-203ENST00000443187 PURAQ00577 322 aaKnown RBP12.92□□□□□ -0.34
PRKD3-203ENST00000443187 SP2Q02086 613 aa12.92□□□□□ -0.34
PRKD3-203ENST00000443187 TOB2Q14106 344 aaPredicted RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms