RNA–Protein interactions for RNA: ENST00000442975.6

CDKN3-204, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best) BASIC

Gene CDKN3, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-204ENST00000442975 CLTBP09497 229 aa24.39■■□□□ 1.49
CDKN3-204ENST00000442975 CALM1P0DP23 149 aa24.39■■□□□ 1.49
CDKN3-204ENST00000442975 CALM2P0DP24 149 aa24.39■■□□□ 1.49
CDKN3-204ENST00000442975 CALM3P0DP25 149 aa24.39■■□□□ 1.49
CDKN3-204ENST00000442975 ADCK5Q3MIX3 580 aa24.39■■□□□ 1.49
CDKN3-204ENST00000442975 OR6J1Q8NGC5 347 aa24.39■■□□□ 1.49
CDKN3-204ENST00000442975 RRP36Q96EU6 259 aaKnown RBP24.39■■□□□ 1.49
CDKN3-204ENST00000442975 SPZ1Q9BXG8 430 aa24.39■■□□□ 1.49
CDKN3-204ENST00000442975 SEC63Q9UGP8 760 aaKnown RBP24.39■■□□□ 1.49
CDKN3-204ENST00000442975 ELP1O95163 1332 aa24.38■■□□□ 1.49
CDKN3-204ENST00000442975 A0A0U1RQG5 324 aaPredicted RBP24.38■■□□□ 1.49
CDKN3-204ENST00000442975 BMP8BP34820 402 aa24.38■■□□□ 1.49
CDKN3-204ENST00000442975 GNAQP50148 359 aa24.38■■□□□ 1.49
CDKN3-204ENST00000442975 HSD17B4P51659 736 aa24.38■■□□□ 1.49
CDKN3-204ENST00000442975 NKX3-2P78367 333 aa24.38■■□□□ 1.49
CDKN3-204ENST00000442975 SYNE3Q6ZMZ3 975 aa24.38■■□□□ 1.49
CDKN3-204ENST00000442975 SH3RF1Q7Z6J0 888 aa24.38■■□□□ 1.49
CDKN3-204ENST00000442975 CMTR1Q8N1G2 835 aaKnown RBP24.38■■□□□ 1.49
CDKN3-204ENST00000442975 LZTS2Q9BRK4 669 aa24.38■■□□□ 1.49
CDKN3-204ENST00000442975 Q9Y3F1 56 aa24.38■■□□□ 1.49
CDKN3-204ENST00000442975 RBM47A0AV96 593 aaKnown RBP24.37■■□□□ 1.49
CDKN3-204ENST00000442975 GCOM1H8Y6P7 765 aaPredicted RBP24.37■■□□□ 1.49
CDKN3-204ENST00000442975 REC8O95072 547 aa24.37■■□□□ 1.49
CDKN3-204ENST00000442975 POLR2MP0CAP2 368 aa24.37■■□□□ 1.49
CDKN3-204ENST00000442975 SEPT14Q6ZU15 432 aa24.37■■□□□ 1.49
CDKN3-204ENST00000442975 DHX32Q7L7V1 743 aaKnown RBP24.37■■□□□ 1.49
CDKN3-204ENST00000442975 PXMP2Q9NR77 195 aa24.37■■□□□ 1.49
CDKN3-204ENST00000442975 TRIM43BA6NCK2 446 aa24.36■■□□□ 1.49
CDKN3-204ENST00000442975 DCDC2CA8MYV0 355 aa24.36■■□□□ 1.49
CDKN3-204ENST00000442975 TXNP10599 105 aaKnown RBP24.36■■□□□ 1.49
CDKN3-204ENST00000442975 FGD1P98174 961 aa24.36■■□□□ 1.49
CDKN3-204ENST00000442975 TTLL4Q14679 1199 aa24.36■■□□□ 1.49
CDKN3-204ENST00000442975 STXBP2Q15833 593 aa24.36■■□□□ 1.49
CDKN3-204ENST00000442975 SGMS1Q86VZ5 419 aa24.36■■□□□ 1.49
CDKN3-204ENST00000442975 FCHSD1Q86WN1 690 aa24.36■■□□□ 1.49
CDKN3-204ENST00000442975 SRBD1Q8N5C6 995 aaKnown RBP24.36■■□□□ 1.49
CDKN3-204ENST00000442975 COPS5Q92905 334 aa24.36■■□□□ 1.49
CDKN3-204ENST00000442975 TRIM43Q96BQ3 446 aaPredicted RBP24.36■■□□□ 1.49
CDKN3-204ENST00000442975 IWS1Q96ST2 819 aa24.36■■□□□ 1.49
CDKN3-204ENST00000442975 TMEM39AQ9NV64 488 aa24.36■■□□□ 1.49
CDKN3-204ENST00000442975 LAMA3Q16787 3333 aa24.36■■□□□ 1.49
CDKN3-204ENST00000442975 MROH7Q68CQ1 1323 aa24.35■■□□□ 1.49
CDKN3-204ENST00000442975 CABYRO75952 493 aa24.35■■□□□ 1.49
CDKN3-204ENST00000442975 CPT1AP50416 773 aa24.35■■□□□ 1.49
CDKN3-204ENST00000442975 GHRHRQ02643 423 aa24.35■■□□□ 1.49
CDKN3-204ENST00000442975 TSGA10IPQ3SY00 556 aa24.35■■□□□ 1.49
CDKN3-204ENST00000442975 ANKRD33Q7Z3H0 272 aa24.35■■□□□ 1.49
CDKN3-204ENST00000442975 TDHQ8IZJ6 230 aa24.35■■□□□ 1.49
CDKN3-204ENST00000442975 CCDC82Q8N4S0 544 aa24.35■■□□□ 1.49
CDKN3-204ENST00000442975 BADQ92934 168 aa24.35■■□□□ 1.49
CDKN3-204ENST00000442975 JAKMIP1Q96N16 626 aaKnown RBP24.35■■□□□ 1.49
CDKN3-204ENST00000442975 NAP1L2Q9ULW6 460 aaPredicted RBP24.35■■□□□ 1.49
CDKN3-204ENST00000442975 ARVCFO00192 962 aa24.34■■□□□ 1.49
CDKN3-204ENST00000442975 NKRFO15226 690 aaKnown RBP eCLIP24.34■■□□□ 1.49
CDKN3-204ENST00000442975 ARIH2O95376 493 aa24.34■■□□□ 1.49
CDKN3-204ENST00000442975 MYL3P08590 195 aa24.34■■□□□ 1.49
CDKN3-204ENST00000442975 HMGB1P09429 215 aaKnown RBP24.34■■□□□ 1.49
CDKN3-204ENST00000442975 MYCLP12524 364 aaPredicted RBP24.34■■□□□ 1.49
CDKN3-204ENST00000442975 CPA1P15085 419 aa24.34■■□□□ 1.49
CDKN3-204ENST00000442975 ERICH6BQ5W0A0 696 aa24.34■■□□□ 1.49
CDKN3-204ENST00000442975 APOA5Q6Q788 366 aa24.34■■□□□ 1.49
CDKN3-204ENST00000442975 TMTC3Q6ZXV5 915 aa24.34■■□□□ 1.49
CDKN3-204ENST00000442975 FANCBQ8NB91 859 aa24.34■■□□□ 1.49
CDKN3-204ENST00000442975 hCG_1642624A0A1W2PR95 340 aa24.33■■□□□ 1.49
CDKN3-204ENST00000442975 NR3C2P08235 984 aa24.33■■□□□ 1.49
CDKN3-204ENST00000442975 HSPA4P34932 840 aa24.33■■□□□ 1.49
CDKN3-204ENST00000442975 PSMC6P62333 389 aa24.33■■□□□ 1.49
CDKN3-204ENST00000442975 EXOSC10Q01780 885 aaKnown RBP24.33■■□□□ 1.49
CDKN3-204ENST00000442975 FAAP100Q0VG06 881 aa24.33■■□□□ 1.49
CDKN3-204ENST00000442975 BRDTQ58F21 947 aaPredicted RBP24.33■■□□□ 1.49
CDKN3-204ENST00000442975 TOX2Q96NM4 488 aa24.33■■□□□ 1.49
CDKN3-204ENST00000442975 PDCD2LQ9BRP1 358 aa24.33■■□□□ 1.49
CDKN3-204ENST00000442975 MAP3K20Q9NYL2 800 aaKnown RBP24.33■■□□□ 1.49
CDKN3-204ENST00000442975 KLF18A0A0U1RQI7 1052 aa24.32■■□□□ 1.48
CDKN3-204ENST00000442975 ZBTB43O43298 467 aa24.32■■□□□ 1.48
CDKN3-204ENST00000442975 EIF3JO75822 258 aaKnown RBP24.32■■□□□ 1.48
CDKN3-204ENST00000442975 RAG1P15918 1043 aa24.32■■□□□ 1.48
CDKN3-204ENST00000442975 SMARCA1P28370 1054 aa24.32■■□□□ 1.48
CDKN3-204ENST00000442975 RTN1Q16799 776 aa24.32■■□□□ 1.48
CDKN3-204ENST00000442975 IL31RAQ8NI17 732 aa24.32■■□□□ 1.48
CDKN3-204ENST00000442975 BRPF3Q9ULD4 1205 aa24.32■■□□□ 1.48
CDKN3-204ENST00000442975 SNX14Q9Y5W7 946 aa24.32■■□□□ 1.48
CDKN3-204ENST00000442975 MRVI1Q9Y6F6 885 aa24.32■■□□□ 1.48
CDKN3-204ENST00000442975 SOX1O00570 391 aaPredicted RBP24.31■■□□□ 1.48
CDKN3-204ENST00000442975 KIAA0355O15063 1070 aa24.31■■□□□ 1.48
CDKN3-204ENST00000442975 TLR3O15455 904 aaKnown RBP24.31■■□□□ 1.48
CDKN3-204ENST00000442975 ITGA7Q13683 1181 aa24.31■■□□□ 1.48
CDKN3-204ENST00000442975 LY6KQ17RY6 165 aa24.31■■□□□ 1.48
CDKN3-204ENST00000442975 SAMD3Q8N6K7 520 aa24.31■■□□□ 1.48
CDKN3-204ENST00000442975 POLR3EQ9NVU0 708 aa24.31■■□□□ 1.48
CDKN3-204ENST00000442975 GOLGA8AA7E2F4 631 aa24.3■■□□□ 1.48
CDKN3-204ENST00000442975 GOLGA8BA8MQT2 603 aa24.3■■□□□ 1.48
CDKN3-204ENST00000442975 ITGB8P26012 769 aa24.3■■□□□ 1.48
CDKN3-204ENST00000442975 CCND2P30279 289 aa24.3■■□□□ 1.48
CDKN3-204ENST00000442975 CDK7P50613 346 aa24.3■■□□□ 1.48
CDKN3-204ENST00000442975 PGM5Q15124 567 aa24.3■■□□□ 1.48
CDKN3-204ENST00000442975 CCDC62Q6P9F0 684 aa24.3■■□□□ 1.48
CDKN3-204ENST00000442975 BLOC1S2Q6QNY1 142 aa24.3■■□□□ 1.48
CDKN3-204ENST00000442975 HEATR3Q7Z4Q2 680 aa24.3■■□□□ 1.48
CDKN3-204ENST00000442975 FAM126BQ8IXS8 530 aa24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms