RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 FGBP02675 491 aa13.72□□□□□ -0.21
TTC28-203ENST00000442232 EDNRBP24530 442 aa13.72□□□□□ -0.21
TTC28-203ENST00000442232 CCL23P55773 120 aa13.72□□□□□ -0.21
TTC28-203ENST00000442232 TRAF1Q13077 416 aa13.72□□□□□ -0.21
TTC28-203ENST00000442232 SART3Q15020 963 aaKnown RBP13.72□□□□□ -0.21
TTC28-203ENST00000442232 QRICH1Q2TAL8 776 aa13.72□□□□□ -0.21
TTC28-203ENST00000442232 TMEM63BQ5T3F8 832 aa13.72□□□□□ -0.21
TTC28-203ENST00000442232 ARHGEF16Q5VV41 709 aa13.72□□□□□ -0.21
TTC28-203ENST00000442232 NSUN6Q8TEA1 469 aaKnown RBP13.72□□□□□ -0.21
TTC28-203ENST00000442232 NOC4LQ9BVI4 516 aaKnown RBP13.72□□□□□ -0.21
TTC28-203ENST00000442232 MSRAQ9UJ68 235 aa13.72□□□□□ -0.21
TTC28-203ENST00000442232 NOD1Q9Y239 953 aa13.72□□□□□ -0.21
TTC28-203ENST00000442232 SCN10AQ9Y5Y9 1956 aa13.72□□□□□ -0.21
TTC28-203ENST00000442232 RAB30Q15771 203 aa13.71□□□□□ -0.21
TTC28-203ENST00000442232 STXBP2Q15833 593 aa13.71□□□□□ -0.21
TTC28-203ENST00000442232 IWS1Q96ST2 819 aa13.71□□□□□ -0.21
TTC28-203ENST00000442232 RMDN3Q96TC7 470 aa13.71□□□□□ -0.21
TTC28-203ENST00000442232 AMNQ9BXJ7 453 aa13.71□□□□□ -0.21
TTC28-203ENST00000442232 GBF1Q92538 1859 aa13.71□□□□□ -0.21
TTC28-203ENST00000442232 TANC1Q9C0D5 1861 aa13.71□□□□□ -0.21
TTC28-203ENST00000442232 GRIN2DO15399 1336 aa13.7□□□□□ -0.22
TTC28-203ENST00000442232 ZBBXA8MT70 800 aa13.7□□□□□ -0.22
TTC28-203ENST00000442232 KLRF2D3W0D1 207 aa13.7□□□□□ -0.22
TTC28-203ENST00000442232 CFBP00751 764 aa13.7□□□□□ -0.22
TTC28-203ENST00000442232 GH1P01241 217 aa13.7□□□□□ -0.22
TTC28-203ENST00000442232 GSPT1P15170 499 aaKnown RBP13.7□□□□□ -0.22
TTC28-203ENST00000442232 PDE4AP27815 886 aa13.7□□□□□ -0.22
TTC28-203ENST00000442232 CHMP4BP1P59074 171 aa13.7□□□□□ -0.22
TTC28-203ENST00000442232 SEPT14Q6ZU15 432 aa13.7□□□□□ -0.22
TTC28-203ENST00000442232 C16orf59Q7L2K0 433 aa13.7□□□□□ -0.22
TTC28-203ENST00000442232 CCDC155Q8N6L0 562 aa13.7□□□□□ -0.22
TTC28-203ENST00000442232 SYTL5Q8TDW5 730 aaPredicted RBP13.7□□□□□ -0.22
TTC28-203ENST00000442232 HERVK_113Q902F9 699 aa13.7□□□□□ -0.22
TTC28-203ENST00000442232 GAS2L1Q99501 681 aaPredicted RBP13.7□□□□□ -0.22
TTC28-203ENST00000442232 ZNF576Q9H609 170 aa13.7□□□□□ -0.22
TTC28-203ENST00000442232 JMJD4Q9H9V9 463 aa13.7□□□□□ -0.22
TTC28-203ENST00000442232 TRMT13Q9NUP7 481 aaKnown RBP13.7□□□□□ -0.22
TTC28-203ENST00000442232 CUL9Q8IWT3 2517 aa13.69□□□□□ -0.22
TTC28-203ENST00000442232 UMODL1Q5DID0 1318 aa13.69□□□□□ -0.22
TTC28-203ENST00000442232 MYH7BA7E2Y1 1941 aa13.69□□□□□ -0.22
TTC28-203ENST00000442232 A6NJR5 290 aa13.69□□□□□ -0.22
TTC28-203ENST00000442232 IFIT3O14879 490 aaKnown RBP13.69□□□□□ -0.22
TTC28-203ENST00000442232 PFKMP08237 780 aa13.69□□□□□ -0.22
TTC28-203ENST00000442232 ACTN1P12814 892 aa13.69□□□□□ -0.22
TTC28-203ENST00000442232 EIF2AK2P19525 551 aaKnown RBP13.69□□□□□ -0.22
TTC28-203ENST00000442232 PTPN11Q06124 597 aaPredicted RBP13.69□□□□□ -0.22
TTC28-203ENST00000442232 NBPF20Q3BBV1 942 aa13.69□□□□□ -0.22
TTC28-203ENST00000442232 RASIP1Q5U651 963 aa13.69□□□□□ -0.22
TTC28-203ENST00000442232 NFRKBQ6P4R8 1299 aa13.69□□□□□ -0.22
TTC28-203ENST00000442232 OTOP2Q7RTS6 562 aa13.69□□□□□ -0.22
TTC28-203ENST00000442232 RETREG2Q8NC44 543 aa13.69□□□□□ -0.22
TTC28-203ENST00000442232 COPS5Q92905 334 aa13.69□□□□□ -0.22
TTC28-203ENST00000442232 TAAR1Q96RJ0 339 aa13.69□□□□□ -0.22
TTC28-203ENST00000442232 PBX4Q9BYU1 374 aa13.69□□□□□ -0.22
TTC28-203ENST00000442232 GRXCR1A8MXD5 290 aa13.68□□□□□ -0.22
TTC28-203ENST00000442232 ZBTB5O15062 677 aa13.68□□□□□ -0.22
TTC28-203ENST00000442232 CYP2C9P11712 490 aa13.68□□□□□ -0.22
TTC28-203ENST00000442232 CHMLP26374 656 aa13.68□□□□□ -0.22
TTC28-203ENST00000442232 RFC2P35250 354 aa13.68□□□□□ -0.22
TTC28-203ENST00000442232 IRX6P78412 446 aaPredicted RBP13.68□□□□□ -0.22
TTC28-203ENST00000442232 WTAPQ15007 396 aa13.68□□□□□ -0.22
TTC28-203ENST00000442232 CYB5R4Q7L1T6 521 aa13.68□□□□□ -0.22
TTC28-203ENST00000442232 CHST3Q7LGC8 479 aa13.68□□□□□ -0.22
TTC28-203ENST00000442232 HOMER1Q86YM7 354 aa13.68□□□□□ -0.22
TTC28-203ENST00000442232 STAG2Q8N3U4 1231 aa13.68□□□□□ -0.22
TTC28-203ENST00000442232 NCOA7Q8NI08 942 aa13.68□□□□□ -0.22
TTC28-203ENST00000442232 SCLYQ96I15 445 aa13.68□□□□□ -0.22
TTC28-203ENST00000442232 WNT8AQ9H1J5 351 aa13.68□□□□□ -0.22
TTC28-203ENST00000442232 PCDHA1Q9Y5I3 950 aa13.68□□□□□ -0.22
TTC28-203ENST00000442232 MRVI1Q9Y6F6 885 aa13.68□□□□□ -0.22
TTC28-203ENST00000442232 SLC4A7Q9Y6M7 1214 aa13.68□□□□□ -0.22
TTC28-203ENST00000442232 MYO9BQ13459 2157 aa13.68□□□□□ -0.22
TTC28-203ENST00000442232 SCN5AQ14524 2016 aa13.68□□□□□ -0.22
TTC28-203ENST00000442232 EIF3JO75822 258 aaKnown RBP13.67□□□□□ -0.22
TTC28-203ENST00000442232 ARIH2O95376 493 aa13.67□□□□□ -0.22
TTC28-203ENST00000442232 MMP3P08254 477 aa13.67□□□□□ -0.22
TTC28-203ENST00000442232 CYP21A2P08686 494 aa13.67□□□□□ -0.22
TTC28-203ENST00000442232 CASTP20810 708 aaKnown RBP13.67□□□□□ -0.22
TTC28-203ENST00000442232 BFSP2Q13515 415 aa13.67□□□□□ -0.22
TTC28-203ENST00000442232 GRM4Q14833 912 aa13.67□□□□□ -0.22
TTC28-203ENST00000442232 GRIN2CQ14957 1233 aa13.67□□□□□ -0.22
TTC28-203ENST00000442232 SEC23AQ15436 765 aa13.67□□□□□ -0.22
TTC28-203ENST00000442232 DGKDQ16760 1214 aa13.67□□□□□ -0.22
TTC28-203ENST00000442232 LY6KQ17RY6 165 aa13.67□□□□□ -0.22
TTC28-203ENST00000442232 CATIPQ7Z7H3 387 aa13.67□□□□□ -0.22
TTC28-203ENST00000442232 SAMD3Q8N6K7 520 aa13.67□□□□□ -0.22
TTC28-203ENST00000442232 AFG1LQ8WV93 481 aa13.67□□□□□ -0.22
TTC28-203ENST00000442232 TBC1D5Q92609 795 aa13.67□□□□□ -0.22
TTC28-203ENST00000442232 KATNAL1Q9BW62 490 aa13.67□□□□□ -0.22
TTC28-203ENST00000442232 IL25Q9H293 177 aa13.67□□□□□ -0.22
TTC28-203ENST00000442232 SLC28A3Q9HAS3 691 aa13.67□□□□□ -0.22
TTC28-203ENST00000442232 PXMP2Q9NR77 195 aa13.67□□□□□ -0.22
TTC28-203ENST00000442232 MAP3K20Q9NYL2 800 aaKnown RBP13.67□□□□□ -0.22
TTC28-203ENST00000442232 MAD2L2Q9UI95 211 aa13.67□□□□□ -0.22
TTC28-203ENST00000442232 E7EWF7 191 aa13.66□□□□□ -0.22
TTC28-203ENST00000442232 PITPNM1O00562 1244 aa13.66□□□□□ -0.22
TTC28-203ENST00000442232 NR3C2P08235 984 aa13.66□□□□□ -0.22
TTC28-203ENST00000442232 MYCLP12524 364 aaPredicted RBP13.66□□□□□ -0.22
TTC28-203ENST00000442232 PBX2P40425 430 aa13.66□□□□□ -0.22
TTC28-203ENST00000442232 HSD17B4P51659 736 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms