RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 SCN4AP35499 1836 aa9.14□□□□□ -0.95
CCDC39-201ENST00000442201 LOC102724159A0A0B4J2E5 919 aa9.13□□□□□ -0.95
CCDC39-201ENST00000442201 PIK3CDO00329 1044 aa9.13□□□□□ -0.95
CCDC39-201ENST00000442201 OPLAHO14841 1288 aa9.13□□□□□ -0.95
CCDC39-201ENST00000442201 CLSTN1O94985 981 aa9.13□□□□□ -0.95
CCDC39-201ENST00000442201 PRPHP41219 470 aa9.13□□□□□ -0.95
CCDC39-201ENST00000442201 PWP2Q15269 919 aaKnown RBP9.13□□□□□ -0.95
CCDC39-201ENST00000442201 RBM43Q6ZSC3 357 aaKnown RBP9.13□□□□□ -0.95
CCDC39-201ENST00000442201 MOB2Q70IA6 237 aa9.13□□□□□ -0.95
CCDC39-201ENST00000442201 CKAP2LQ8IYA6 745 aa9.13□□□□□ -0.95
CCDC39-201ENST00000442201 CPXCR1Q8N123 301 aa9.13□□□□□ -0.95
CCDC39-201ENST00000442201 WDR90Q96KV7 1748 aa9.13□□□□□ -0.95
CCDC39-201ENST00000442201 MYCBPQ99417 103 aaPredicted RBP9.13□□□□□ -0.95
CCDC39-201ENST00000442201 NCAPGQ9BPX3 1015 aa9.13□□□□□ -0.95
CCDC39-201ENST00000442201 TMEM60Q9H2L4 133 aa9.13□□□□□ -0.95
CCDC39-201ENST00000442201 TSPY26PQ9H489 355 aa9.13□□□□□ -0.95
CCDC39-201ENST00000442201 RRAGCQ9HB90 399 aa9.13□□□□□ -0.95
CCDC39-201ENST00000442201 ZNF536O15090 1300 aa9.13□□□□□ -0.95
CCDC39-201ENST00000442201 SPDYE5A6NIY4 337 aa9.13□□□□□ -0.95
CCDC39-201ENST00000442201 GCOM1H8Y6P7 765 aaPredicted RBP9.13□□□□□ -0.95
CCDC39-201ENST00000442201 CFBP00751 764 aa9.13□□□□□ -0.95
CCDC39-201ENST00000442201 OR52Z1P0C646 297 aa9.13□□□□□ -0.95
CCDC39-201ENST00000442201 POLR2MP0CAP2 368 aa9.13□□□□□ -0.95
CCDC39-201ENST00000442201 GCFC2P16383 781 aaKnown RBP9.13□□□□□ -0.95
CCDC39-201ENST00000442201 LONP1P36776 959 aaKnown RBP9.13□□□□□ -0.95
CCDC39-201ENST00000442201 COG2Q14746 738 aa9.13□□□□□ -0.95
CCDC39-201ENST00000442201 PPP4R3AQ6IN85 833 aa9.13□□□□□ -0.95
CCDC39-201ENST00000442201 PDCL2Q8N4E4 241 aa9.13□□□□□ -0.95
CCDC39-201ENST00000442201 OTUD5Q96G74 571 aa9.13□□□□□ -0.95
CCDC39-201ENST00000442201 CLMNQ96JQ2 1002 aa9.13□□□□□ -0.95
CCDC39-201ENST00000442201 AGBL1Q96MI9 1066 aa9.13□□□□□ -0.95
CCDC39-201ENST00000442201 CCDC192P0DO97 292 aa9.13□□□□□ -0.95
CCDC39-201ENST00000442201 HOXA13P31271 388 aaPredicted RBP9.13□□□□□ -0.95
CCDC39-201ENST00000442201 USP11P51784 963 aa9.13□□□□□ -0.95
CCDC39-201ENST00000442201 ATG4CQ96DT6 458 aa9.13□□□□□ -0.95
CCDC39-201ENST00000442201 RAVER2Q9HCJ3 691 aaKnown RBP9.13□□□□□ -0.95
CCDC39-201ENST00000442201 VWA5AO00534 786 aa9.12□□□□□ -0.95
CCDC39-201ENST00000442201 CXCL11O14625 94 aa9.12□□□□□ -0.95
CCDC39-201ENST00000442201 TDP2O95551 362 aa9.12□□□□□ -0.95
CCDC39-201ENST00000442201 CATSPERGQ6ZRH7 1159 aa9.12□□□□□ -0.95
CCDC39-201ENST00000442201 USP49Q70CQ1 688 aa9.12□□□□□ -0.95
CCDC39-201ENST00000442201 SYMPKQ92797 1274 aaKnown RBP9.12□□□□□ -0.95
CCDC39-201ENST00000442201 EPSTI1Q96J88 318 aa9.12□□□□□ -0.95
CCDC39-201ENST00000442201 ZNF408Q9H9D4 720 aa9.12□□□□□ -0.95
CCDC39-201ENST00000442201 HOXC10Q9NYD6 342 aa9.12□□□□□ -0.95
CCDC39-201ENST00000442201 CEP83Q9Y592 693 aa9.12□□□□□ -0.95
CCDC39-201ENST00000442201 POLR2AP24928 1970 aaKnown RBP9.12□□□□□ -0.95
CCDC39-201ENST00000442201 MYPNQ86TC9 1320 aa9.12□□□□□ -0.95
CCDC39-201ENST00000442201 IRF6O14896 467 aa9.12□□□□□ -0.95
CCDC39-201ENST00000442201 POLR2DO15514 142 aaKnown RBP9.12□□□□□ -0.95
CCDC39-201ENST00000442201 ALAS1P13196 640 aa9.12□□□□□ -0.95
CCDC39-201ENST00000442201 DSG3P32926 999 aa9.12□□□□□ -0.95
CCDC39-201ENST00000442201 TXLNAP40222 546 aa9.12□□□□□ -0.95
CCDC39-201ENST00000442201 ARHGAP4P98171 946 aa9.12□□□□□ -0.95
CCDC39-201ENST00000442201 SATB1Q01826 763 aa9.12□□□□□ -0.95
CCDC39-201ENST00000442201 TERF2Q15554 542 aa9.12□□□□□ -0.95
CCDC39-201ENST00000442201 FCHSD1Q86WN1 690 aa9.12□□□□□ -0.95
CCDC39-201ENST00000442201 MCF2L2Q86YR7 1114 aa9.12□□□□□ -0.95
CCDC39-201ENST00000442201 CNNM3Q8NE01 707 aa9.12□□□□□ -0.95
CCDC39-201ENST00000442201 PLCD4Q9BRC7 762 aa9.12□□□□□ -0.95
CCDC39-201ENST00000442201 TRAF5O00463 557 aa9.11□□□□□ -0.95
CCDC39-201ENST00000442201 EDIL3O43854 480 aa9.11□□□□□ -0.95
CCDC39-201ENST00000442201 SREBF1P36956 1147 aa9.11□□□□□ -0.95
CCDC39-201ENST00000442201 PPIL2Q13356 520 aa9.11□□□□□ -0.95
CCDC39-201ENST00000442201 IL17AQ16552 155 aa9.11□□□□□ -0.95
CCDC39-201ENST00000442201 CALCRLQ16602 461 aa9.11□□□□□ -0.95
CCDC39-201ENST00000442201 LDLRAD1Q5T700 205 aa9.11□□□□□ -0.95
CCDC39-201ENST00000442201 MOXD1Q6UVY6 613 aa9.11□□□□□ -0.95
CCDC39-201ENST00000442201 KRBA2Q6ZNG9 492 aa9.11□□□□□ -0.95
CCDC39-201ENST00000442201 PDILTQ8N807 584 aa9.11□□□□□ -0.95
CCDC39-201ENST00000442201 TBC1D5Q92609 795 aa9.11□□□□□ -0.95
CCDC39-201ENST00000442201 CCDC34Q96HJ3 373 aa9.11□□□□□ -0.95
CCDC39-201ENST00000442201 P2RX7Q99572 595 aaKnown RBP9.11□□□□□ -0.95
CCDC39-201ENST00000442201 EHMT1Q9H9B1 1298 aa9.11□□□□□ -0.95
CCDC39-201ENST00000442201 DDX25Q9UHL0 483 aaKnown RBP9.11□□□□□ -0.95
CCDC39-201ENST00000442201 HOOK1Q9UJC3 728 aaKnown RBP9.11□□□□□ -0.95
CCDC39-201ENST00000442201 OAZ1P54368 228 aa9.11□□□□□ -0.95
CCDC39-201ENST00000442201 LONRF3Q496Y0 759 aa9.11□□□□□ -0.95
CCDC39-201ENST00000442201 CT47A1Q5JQC4 288 aaPredicted RBP9.11□□□□□ -0.95
CCDC39-201ENST00000442201 PROCA1Q8NCQ7 364 aaPredicted RBP9.11□□□□□ -0.95
CCDC39-201ENST00000442201 BANK1Q8NDB2 785 aa9.11□□□□□ -0.95
CCDC39-201ENST00000442201 AK8Q96MA6 479 aa9.11□□□□□ -0.95
CCDC39-201ENST00000442201 PYM1Q9BRP8 204 aaKnown RBP9.11□□□□□ -0.95
CCDC39-201ENST00000442201 FUCA2Q9BTY2 467 aa9.11□□□□□ -0.95
CCDC39-201ENST00000442201 CCDC39Q9UFE4 941 aa9.11□□□□□ -0.95
CCDC39-201ENST00000442201 ADAMTS5Q9UNA0 930 aa9.11□□□□□ -0.95
CCDC39-201ENST00000442201 A0A0G2JLL6 359 aaPredicted RBP9.11□□□□□ -0.95
CCDC39-201ENST00000442201 UNCXA6NJT0 531 aa9.11□□□□□ -0.95
CCDC39-201ENST00000442201 SLC37A4O43826 429 aa9.11□□□□□ -0.95
CCDC39-201ENST00000442201 MARCH6O60337 910 aa9.11□□□□□ -0.95
CCDC39-201ENST00000442201 TYRO3Q06418 890 aa9.11□□□□□ -0.95
CCDC39-201ENST00000442201 GADL1Q6ZQY3 521 aa9.11□□□□□ -0.95
CCDC39-201ENST00000442201 PRRT2Q7Z6L0 340 aaPredicted RBP9.11□□□□□ -0.95
CCDC39-201ENST00000442201 CRYGNQ8WXF5 182 aa9.11□□□□□ -0.95
CCDC39-201ENST00000442201 OPTNQ96CV9 577 aa9.11□□□□□ -0.95
CCDC39-201ENST00000442201 MTMR9Q96QG7 549 aa9.11□□□□□ -0.95
CCDC39-201ENST00000442201 KCNH4Q9UQ05 1017 aa9.11□□□□□ -0.95
CCDC39-201ENST00000442201 CYP3A7-CYP3A51PA0A087WV96 503 aa9.1□□□□□ -0.95
CCDC39-201ENST00000442201 SPDYE4A6NLX3 237 aa9.1□□□□□ -0.95
CCDC39-201ENST00000442201 CTIFO43310 598 aaKnown RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms