RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 TTC38Q5R3I4 469 aa8.29□□□□□ -1.08
HDAC9-214ENST00000441542 TTLL7Q6ZT98 887 aa8.29□□□□□ -1.08
HDAC9-214ENST00000441542 FAM47EQ6ZV65 393 aa8.29□□□□□ -1.08
HDAC9-214ENST00000441542 CCDC50Q8IVM0 306 aa8.29□□□□□ -1.08
HDAC9-214ENST00000441542 ARFGAP2Q8N6H7 521 aa8.29□□□□□ -1.08
HDAC9-214ENST00000441542 PIK3R5Q8WYR1 880 aa8.29□□□□□ -1.08
HDAC9-214ENST00000441542 UIMC1Q96RL1 719 aa8.29□□□□□ -1.08
HDAC9-214ENST00000441542 MTRQ99707 1265 aa8.29□□□□□ -1.08
HDAC9-214ENST00000441542 FBXL5Q9UKA1 691 aa8.29□□□□□ -1.08
HDAC9-214ENST00000441542 PNMA2Q9UL42 364 aa8.29□□□□□ -1.08
HDAC9-214ENST00000441542 ZNF532Q9HCE3 1301 aa8.29□□□□□ -1.08
HDAC9-214ENST00000441542 KCNK3O14649 394 aa8.29□□□□□ -1.08
HDAC9-214ENST00000441542 SMIM24O75264 130 aa8.29□□□□□ -1.08
HDAC9-214ENST00000441542 PALMO75781 387 aa8.29□□□□□ -1.08
HDAC9-214ENST00000441542 TCP1P17987 556 aaKnown RBP8.29□□□□□ -1.08
HDAC9-214ENST00000441542 HSD17B3P37058 310 aa8.29□□□□□ -1.08
HDAC9-214ENST00000441542 DHX9Q08211 1270 aaKnown RBP8.29□□□□□ -1.08
HDAC9-214ENST00000441542 MKRN4PQ13434 485 aaPredicted RBP8.29□□□□□ -1.08
HDAC9-214ENST00000441542 LRRC14Q15048 493 aa8.29□□□□□ -1.08
HDAC9-214ENST00000441542 CCDC38Q502W7 563 aa8.29□□□□□ -1.08
HDAC9-214ENST00000441542 METTL24Q5JXM2 366 aa8.29□□□□□ -1.08
HDAC9-214ENST00000441542 FNBP4Q8N3X1 1017 aaPredicted RBP8.29□□□□□ -1.08
HDAC9-214ENST00000441542 CNOT6LQ96LI5 555 aaKnown RBP8.29□□□□□ -1.08
HDAC9-214ENST00000441542 DDX47Q9H0S4 455 aaKnown RBP8.29□□□□□ -1.08
HDAC9-214ENST00000441542 BABAM1Q9NWV8 329 aa8.29□□□□□ -1.08
HDAC9-214ENST00000441542 CAPN11Q9UMQ6 739 aa8.29□□□□□ -1.08
HDAC9-214ENST00000441542 TRIM33Q9UPN9 1127 aa8.29□□□□□ -1.08
HDAC9-214ENST00000441542 PEAK1Q9H792 1746 aa8.29□□□□□ -1.08
HDAC9-214ENST00000441542 HMGB1P1B2RPK0 211 aaPredicted RBP8.29□□□□□ -1.08
HDAC9-214ENST00000441542 H0Y3Z8 333 aa8.29□□□□□ -1.08
HDAC9-214ENST00000441542 MBD4O95243 580 aa8.29□□□□□ -1.08
HDAC9-214ENST00000441542 ZNF280DQ6N043 979 aa8.29□□□□□ -1.08
HDAC9-214ENST00000441542 TLDC1Q6P9B6 456 aa8.29□□□□□ -1.08
HDAC9-214ENST00000441542 CCDC197Q8NCU1 140 aa8.29□□□□□ -1.08
HDAC9-214ENST00000441542 IGDCC4Q8TDY8 1250 aa8.29□□□□□ -1.08
HDAC9-214ENST00000441542 ETAA1Q9NY74 926 aa8.29□□□□□ -1.08
HDAC9-214ENST00000441542 ATP8A1Q9Y2Q0 1164 aa8.29□□□□□ -1.08
HDAC9-214ENST00000441542 BAZ2BQ9UIF8 2168 aaKnown RBP8.28□□□□□ -1.08
HDAC9-214ENST00000441542 ANO9A1A5B4 782 aa8.28□□□□□ -1.08
HDAC9-214ENST00000441542 PSMA7O14818 248 aa8.28□□□□□ -1.08
HDAC9-214ENST00000441542 TRIM37O94972 964 aa8.28□□□□□ -1.08
HDAC9-214ENST00000441542 PLEKHA8P1O95397 391 aa8.28□□□□□ -1.08
HDAC9-214ENST00000441542 EPB41P11171 864 aaKnown RBP8.28□□□□□ -1.08
HDAC9-214ENST00000441542 PCK1P35558 622 aa8.28□□□□□ -1.08
HDAC9-214ENST00000441542 KRT2P35908 639 aa8.28□□□□□ -1.08
HDAC9-214ENST00000441542 GRIK3Q13003 919 aa8.28□□□□□ -1.08
HDAC9-214ENST00000441542 TAF11Q15544 211 aa8.28□□□□□ -1.08
HDAC9-214ENST00000441542 ZNF790Q6PG37 636 aa8.28□□□□□ -1.08
HDAC9-214ENST00000441542 MFSD6Q6ZSS7 791 aa8.28□□□□□ -1.08
HDAC9-214ENST00000441542 ERICH1Q86X53 443 aa8.28□□□□□ -1.08
HDAC9-214ENST00000441542 SYNE4Q8N205 404 aa8.28□□□□□ -1.08
HDAC9-214ENST00000441542 DYDC1Q8WWB3 177 aa8.28□□□□□ -1.08
HDAC9-214ENST00000441542 TAF4BQ92750 862 aa8.28□□□□□ -1.08
HDAC9-214ENST00000441542 ZNF570Q96NI8 536 aa8.28□□□□□ -1.08
HDAC9-214ENST00000441542 DNAJC7Q99615 494 aa8.28□□□□□ -1.08
HDAC9-214ENST00000441542 TLR10Q9BXR5 811 aa8.28□□□□□ -1.08
HDAC9-214ENST00000441542 PPP1R12CQ9BZL4 782 aa8.28□□□□□ -1.08
HDAC9-214ENST00000441542 SH2D4AQ9H788 454 aa8.28□□□□□ -1.08
HDAC9-214ENST00000441542 ARHGEF10LQ9HCE6 1279 aa8.28□□□□□ -1.08
HDAC9-214ENST00000441542 PIH1D3Q9NQM4 214 aaKnown RBP8.28□□□□□ -1.08
HDAC9-214ENST00000441542 NLRP2Q9NX02 1062 aa8.28□□□□□ -1.08
HDAC9-214ENST00000441542 ARHGAP20Q9P2F6 1191 aa8.28□□□□□ -1.08
HDAC9-214ENST00000441542 C15orf41Q9Y2V0 281 aa8.28□□□□□ -1.08
HDAC9-214ENST00000441542 CPDO75976 1380 aa8.28□□□□□ -1.08
HDAC9-214ENST00000441542 MYH8P13535 1937 aa8.28□□□□□ -1.08
HDAC9-214ENST00000441542 SNUPNO95149 360 aaKnown RBP8.28□□□□□ -1.08
HDAC9-214ENST00000441542 DEXIO95424 95 aa8.28□□□□□ -1.08
HDAC9-214ENST00000441542 PYGLP06737 847 aa8.28□□□□□ -1.08
HDAC9-214ENST00000441542 COPB2P35606 906 aa8.28□□□□□ -1.08
HDAC9-214ENST00000441542 SESN3P58005 492 aa8.28□□□□□ -1.08
HDAC9-214ENST00000441542 NLRP5P59047 1200 aa8.28□□□□□ -1.08
HDAC9-214ENST00000441542 PPP2R2AP63151 447 aa8.28□□□□□ -1.08
HDAC9-214ENST00000441542 USP4Q13107 963 aa8.28□□□□□ -1.08
HDAC9-214ENST00000441542 LLGL1Q15334 1064 aa8.28□□□□□ -1.08
HDAC9-214ENST00000441542 C6orf89Q6UWU4 347 aa8.28□□□□□ -1.08
HDAC9-214ENST00000441542 C3orf20Q8ND61 904 aa8.28□□□□□ -1.08
HDAC9-214ENST00000441542 LPIN2Q92539 896 aa8.28□□□□□ -1.08
HDAC9-214ENST00000441542 BORCS6Q96GS4 357 aa8.28□□□□□ -1.08
HDAC9-214ENST00000441542 NOX5Q96PH1 765 aa8.28□□□□□ -1.08
HDAC9-214ENST00000441542 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.28□□□□□ -1.08
HDAC9-214ENST00000441542 PICK1Q9NRD5 415 aa8.28□□□□□ -1.08
HDAC9-214ENST00000441542 ABCF3Q9NUQ8 709 aa8.28□□□□□ -1.08
HDAC9-214ENST00000441542 AATFQ9NY61 560 aaKnown RBP eCLIP8.28□□□□□ -1.08
HDAC9-214ENST00000441542 ABCF2Q9UG63 623 aa8.28□□□□□ -1.08
HDAC9-214ENST00000441542 LRRC53A6NM62 1247 aa8.27□□□□□ -1.08
HDAC9-214ENST00000441542 KIF3CO14782 793 aa8.27□□□□□ -1.08
HDAC9-214ENST00000441542 DAPK3O43293 454 aa8.27□□□□□ -1.08
HDAC9-214ENST00000441542 SHBGP04278 402 aa8.27□□□□□ -1.08
HDAC9-214ENST00000441542 GNAT1P11488 350 aa8.27□□□□□ -1.08
HDAC9-214ENST00000441542 POLE2P56282 527 aa8.27□□□□□ -1.08
HDAC9-214ENST00000441542 ASIC1P78348 528 aa8.27□□□□□ -1.08
HDAC9-214ENST00000441542 MXRA7P84157 204 aa8.27□□□□□ -1.08
HDAC9-214ENST00000441542 ZBED6P86452 979 aa8.27□□□□□ -1.08
HDAC9-214ENST00000441542 CDC37Q16543 378 aaPredicted RBP8.27□□□□□ -1.08
HDAC9-214ENST00000441542 ZNF658Q5TYW1 1059 aaPredicted RBP8.27□□□□□ -1.08
HDAC9-214ENST00000441542 CRACR2BQ8N4Y2 399 aaPredicted RBP8.27□□□□□ -1.08
HDAC9-214ENST00000441542 CXorf38Q8TB03 319 aa8.27□□□□□ -1.08
HDAC9-214ENST00000441542 FAM89AQ96GI7 184 aa8.27□□□□□ -1.08
HDAC9-214ENST00000441542 OSBPL1AQ9BXW6 950 aa8.27□□□□□ -1.08
HDAC9-214ENST00000441542 CELF4Q9BZC1 486 aaKnown RBP8.27□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms