RNA–Protein interactions for RNA: ENST00000441024.6

CNOT1-202, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNOT1, Length 4,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-202ENST00000441024 RABL6Q3YEC7 729 aaPredicted RBP7.02□□□□□ -1.28
CNOT1-202ENST00000441024 XKR9Q5GH70 373 aa7.02□□□□□ -1.28
CNOT1-202ENST00000441024 RESP18Q5W5W9 173 aa7.02□□□□□ -1.28
CNOT1-202ENST00000441024 KIAA0825Q8IV33 1275 aa7.02□□□□□ -1.28
CNOT1-202ENST00000441024 BBOF1Q8ND07 529 aa7.02□□□□□ -1.28
CNOT1-202ENST00000441024 CCDC97Q96F63 343 aaPredicted RBP7.02□□□□□ -1.28
CNOT1-202ENST00000441024 JPH2Q9BR39 696 aaPredicted RBP7.02□□□□□ -1.28
CNOT1-202ENST00000441024 ASIC3Q9UHC3 531 aa7.02□□□□□ -1.28
CNOT1-202ENST00000441024 TRPC6Q9Y210 931 aa7.02□□□□□ -1.28
CNOT1-202ENST00000441024 PNMA6FA0A0J9YX94 578 aa7.02□□□□□ -1.29
CNOT1-202ENST00000441024 ATP2C2O75185 946 aa7.02□□□□□ -1.29
CNOT1-202ENST00000441024 CCNE1P24864 410 aa7.02□□□□□ -1.29
CNOT1-202ENST00000441024 LIG4P49917 911 aa7.02□□□□□ -1.29
CNOT1-202ENST00000441024 LONRF2Q1L5Z9 754 aa7.02□□□□□ -1.29
CNOT1-202ENST00000441024 EPHA10Q5JZY3 1008 aa7.02□□□□□ -1.29
CNOT1-202ENST00000441024 FAM102BQ5T8I3 360 aa7.02□□□□□ -1.29
CNOT1-202ENST00000441024 MICALL1Q8N3F8 863 aa7.02□□□□□ -1.29
CNOT1-202ENST00000441024 IPO4Q8TEX9 1081 aaKnown RBP7.02□□□□□ -1.29
CNOT1-202ENST00000441024 P3H4Q92791 437 aa7.02□□□□□ -1.29
CNOT1-202ENST00000441024 PANX2Q96RD6 677 aa7.02□□□□□ -1.29
CNOT1-202ENST00000441024 SLC39A2Q9NP94 309 aa7.02□□□□□ -1.29
CNOT1-202ENST00000441024 C1orf112Q9NSG2 853 aa7.02□□□□□ -1.29
CNOT1-202ENST00000441024 HAUS2Q9NVX0 235 aa7.02□□□□□ -1.29
CNOT1-202ENST00000441024 PI4KBQ9UBF8 816 aa7.02□□□□□ -1.29
CNOT1-202ENST00000441024 CDC23Q9UJX2 597 aa7.02□□□□□ -1.29
CNOT1-202ENST00000441024 ZHX1Q9UKY1 873 aaPredicted RBP7.02□□□□□ -1.29
CNOT1-202ENST00000441024 E7EVH7 732 aa7.02□□□□□ -1.29
CNOT1-202ENST00000441024 TNNC2P02585 160 aa7.02□□□□□ -1.29
CNOT1-202ENST00000441024 TNNI1P19237 187 aa7.02□□□□□ -1.29
CNOT1-202ENST00000441024 ARHGAP25P42331 645 aa7.02□□□□□ -1.29
CNOT1-202ENST00000441024 CYP2J2P51589 502 aa7.02□□□□□ -1.29
CNOT1-202ENST00000441024 DMP1Q13316 513 aaPredicted RBP7.02□□□□□ -1.29
CNOT1-202ENST00000441024 ZNF827Q17R98 1081 aa7.02□□□□□ -1.29
CNOT1-202ENST00000441024 PPP4R3CPQ6ZMV5 832 aa7.02□□□□□ -1.29
CNOT1-202ENST00000441024 C11orf57Q6ZUT1 292 aaPredicted RBP7.02□□□□□ -1.29
CNOT1-202ENST00000441024 TMTC3Q6ZXV5 915 aa7.02□□□□□ -1.29
CNOT1-202ENST00000441024 INTS8Q75QN2 995 aaKnown RBP7.02□□□□□ -1.29
CNOT1-202ENST00000441024 SND1Q7KZF4 910 aaKnown RBP eCLIP7.02□□□□□ -1.29
CNOT1-202ENST00000441024 VSTM4Q8IW00 320 aa7.02□□□□□ -1.29
CNOT1-202ENST00000441024 KLHL7Q8IXQ5 586 aa7.02□□□□□ -1.29
CNOT1-202ENST00000441024 CCDC105Q8IYK2 499 aa7.02□□□□□ -1.29
CNOT1-202ENST00000441024 CCDC170Q8IYT3 715 aa7.02□□□□□ -1.29
CNOT1-202ENST00000441024 DCAF4Q8WV16 495 aa7.02□□□□□ -1.29
CNOT1-202ENST00000441024 TRIM11Q96F44 468 aa7.02□□□□□ -1.29
CNOT1-202ENST00000441024 CDHR1Q96JP9 859 aa7.02□□□□□ -1.29
CNOT1-202ENST00000441024 PPP1R13BQ96KQ4 1090 aa7.02□□□□□ -1.29
CNOT1-202ENST00000441024 NACC1Q96RE7 527 aa7.02□□□□□ -1.29
CNOT1-202ENST00000441024 CCPG1Q9ULG6 757 aa7.02□□□□□ -1.29
CNOT1-202ENST00000441024 SMIM23A6NLE4 172 aa7.02□□□□□ -1.29
CNOT1-202ENST00000441024 TCP10L2B9ZVM9 353 aa7.02□□□□□ -1.29
CNOT1-202ENST00000441024 BMP3P12645 472 aa7.02□□□□□ -1.29
CNOT1-202ENST00000441024 PSMC2P35998 433 aaKnown RBP7.02□□□□□ -1.29
CNOT1-202ENST00000441024 RAD51AP2Q09MP3 1159 aa7.02□□□□□ -1.29
CNOT1-202ENST00000441024 ARHGAP44Q17R89 818 aa7.02□□□□□ -1.29
CNOT1-202ENST00000441024 EXOC3L4Q17RC7 722 aa7.02□□□□□ -1.29
CNOT1-202ENST00000441024 MAEAQ7L5Y9 396 aa7.02□□□□□ -1.29
CNOT1-202ENST00000441024 CCDC117Q8IWD4 279 aaPredicted RBP7.02□□□□□ -1.29
CNOT1-202ENST00000441024 ATP6V0A1Q93050 837 aa7.02□□□□□ -1.29
CNOT1-202ENST00000441024 TRERF1Q96PN7 1200 aa7.02□□□□□ -1.29
CNOT1-202ENST00000441024 TMEM206Q9H813 350 aa7.02□□□□□ -1.29
CNOT1-202ENST00000441024 MED4Q9NPJ6 270 aa7.02□□□□□ -1.29
CNOT1-202ENST00000441024 KIAA1024Q9UPX6 916 aa7.02□□□□□ -1.29
CNOT1-202ENST00000441024 CYP19A1P11511 503 aaPredicted RBP7.01□□□□□ -1.29
CNOT1-202ENST00000441024 PDE6CP51160 858 aa7.01□□□□□ -1.29
CNOT1-202ENST00000441024 POLR2FP61218 127 aaKnown RBP7.01□□□□□ -1.29
CNOT1-202ENST00000441024 LACTBP83111 547 aaPredicted RBP7.01□□□□□ -1.29
CNOT1-202ENST00000441024 FKBP3Q00688 224 aaKnown RBP7.01□□□□□ -1.29
CNOT1-202ENST00000441024 AP3B2Q13367 1082 aa7.01□□□□□ -1.29
CNOT1-202ENST00000441024 DPCR1Q3MIW9 517 aa7.01□□□□□ -1.29
CNOT1-202ENST00000441024 TTC31Q49AM3 519 aaPredicted RBP7.01□□□□□ -1.29
CNOT1-202ENST00000441024 SYDE2Q5VT97 1194 aa7.01□□□□□ -1.29
CNOT1-202ENST00000441024 LRCH2Q5VUJ6 765 aa7.01□□□□□ -1.29
CNOT1-202ENST00000441024 SPATS2Q86XZ4 545 aaKnown RBP7.01□□□□□ -1.29
CNOT1-202ENST00000441024 MB21D2Q8IYB1 491 aaPredicted RBP7.01□□□□□ -1.29
CNOT1-202ENST00000441024 TBCKQ8TEA7 893 aa7.01□□□□□ -1.29
CNOT1-202ENST00000441024 TSC1Q92574 1164 aa7.01□□□□□ -1.29
CNOT1-202ENST00000441024 ACCSQ96QU6 501 aa7.01□□□□□ -1.29
CNOT1-202ENST00000441024 TRIM6Q9C030 488 aaPredicted RBP7.01□□□□□ -1.29
CNOT1-202ENST00000441024 MLXIPQ9HAP2 919 aa7.01□□□□□ -1.29
CNOT1-202ENST00000441024 M0QZ92 97 aa7.01□□□□□ -1.29
CNOT1-202ENST00000441024 NDUFAB1O14561 156 aa7.01□□□□□ -1.29
CNOT1-202ENST00000441024 ATF7P17544 494 aaPredicted RBP7.01□□□□□ -1.29
CNOT1-202ENST00000441024 OAS2P29728 719 aaKnown RBP7.01□□□□□ -1.29
CNOT1-202ENST00000441024 MAN1A1P33908 653 aa7.01□□□□□ -1.29
CNOT1-202ENST00000441024 MFAP3P55082 362 aa7.01□□□□□ -1.29
CNOT1-202ENST00000441024 LRMPQ12912 555 aa7.01□□□□□ -1.29
CNOT1-202ENST00000441024 ERCC6LQ2NKX8 1250 aa7.01□□□□□ -1.29
CNOT1-202ENST00000441024 LONRF3Q496Y0 759 aa7.01□□□□□ -1.29
CNOT1-202ENST00000441024 DNAJC21Q5F1R6 531 aaKnown RBP7.01□□□□□ -1.29
CNOT1-202ENST00000441024 CCDC110Q8TBZ0 833 aa7.01□□□□□ -1.29
CNOT1-202ENST00000441024 PIGSQ96S52 555 aa7.01□□□□□ -1.29
CNOT1-202ENST00000441024 TESPA1A2RU30 521 aaPredicted RBP7.01□□□□□ -1.29
CNOT1-202ENST00000441024 DTNBO60941 627 aa7.01□□□□□ -1.29
CNOT1-202ENST00000441024 AFPP02771 609 aaKnown RBP7.01□□□□□ -1.29
CNOT1-202ENST00000441024 VIMP08670 466 aaKnown RBP7.01□□□□□ -1.29
CNOT1-202ENST00000441024 CD19P15391 556 aa7.01□□□□□ -1.29
CNOT1-202ENST00000441024 PTPREP23469 700 aa7.01□□□□□ -1.29
CNOT1-202ENST00000441024 CDK8P49336 464 aa7.01□□□□□ -1.29
CNOT1-202ENST00000441024 LRRC63Q05C16 580 aa7.01□□□□□ -1.29
CNOT1-202ENST00000441024 TFDP1Q14186 410 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms