RNA–Protein interactions for RNA: ENST00000440835.6

PTPRR-204, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRR, Length 2,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-204ENST00000440835 FAM13BQ9NYF5 915 aa7.02□□□□□ -1.29
PTPRR-204ENST00000440835 ABCB11O95342 1321 aa7.01□□□□□ -1.29
PTPRR-204ENST00000440835 A6NJR5 290 aa7.01□□□□□ -1.29
PTPRR-204ENST00000440835 KIF28PB7ZC32 967 aa7.01□□□□□ -1.29
PTPRR-204ENST00000440835 DYNC1LI2O43237 492 aaPredicted RBP7.01□□□□□ -1.29
PTPRR-204ENST00000440835 SNHG28P0DPA3 235 aa7.01□□□□□ -1.29
PTPRR-204ENST00000440835 MCM4P33991 863 aa7.01□□□□□ -1.29
PTPRR-204ENST00000440835 PURAQ00577 322 aaKnown RBP7.01□□□□□ -1.29
PTPRR-204ENST00000440835 CXCL17Q6UXB2 119 aa7.01□□□□□ -1.29
PTPRR-204ENST00000440835 MCF2L2Q86YR7 1114 aa7.01□□□□□ -1.29
PTPRR-204ENST00000440835 AFAP1L1Q8TED9 768 aa7.01□□□□□ -1.29
PTPRR-204ENST00000440835 ANKS1AQ92625 1134 aa7.01□□□□□ -1.29
PTPRR-204ENST00000440835 LENG1Q96BZ8 264 aaPredicted RBP7.01□□□□□ -1.29
PTPRR-204ENST00000440835 C1QTNF1Q9BXJ1 281 aa7.01□□□□□ -1.29
PTPRR-204ENST00000440835 IL17RBQ9NRM6 502 aa7.01□□□□□ -1.29
PTPRR-204ENST00000440835 STX8Q9UNK0 236 aa7.01□□□□□ -1.29
PTPRR-204ENST00000440835 KIAA1217Q5T5P2 1943 aa7.01□□□□□ -1.29
PTPRR-204ENST00000440835 GTPBP6O43824 516 aaPredicted RBP7.01□□□□□ -1.29
PTPRR-204ENST00000440835 PRDM1O75626 825 aa7.01□□□□□ -1.29
PTPRR-204ENST00000440835 CYP2C18P33260 490 aa7.01□□□□□ -1.29
PTPRR-204ENST00000440835 PDE4DQ08499 809 aa7.01□□□□□ -1.29
PTPRR-204ENST00000440835 TTLL4Q14679 1199 aa7.01□□□□□ -1.29
PTPRR-204ENST00000440835 MCMDC2Q4G0Z9 681 aa7.01□□□□□ -1.29
PTPRR-204ENST00000440835 KCNV1Q6PIU1 500 aa7.01□□□□□ -1.29
PTPRR-204ENST00000440835 DGKHQ86XP1 1220 aa7.01□□□□□ -1.29
PTPRR-204ENST00000440835 EMID1Q96A84 441 aaPredicted RBP7.01□□□□□ -1.29
PTPRR-204ENST00000440835 WDR11Q9BZH6 1224 aa7.01□□□□□ -1.29
PTPRR-204ENST00000440835 COL4A6Q14031 1691 aa7.01□□□□□ -1.29
PTPRR-204ENST00000440835 GRIN2DO15399 1336 aa7.01□□□□□ -1.29
PTPRR-204ENST00000440835 HIP1O00291 1037 aa7□□□□□ -1.29
PTPRR-204ENST00000440835 B4GALT4O60513 344 aa7□□□□□ -1.29
PTPRR-204ENST00000440835 IGHDP01880 384 aa7□□□□□ -1.29
PTPRR-204ENST00000440835 PPP2R5BQ15173 497 aa7□□□□□ -1.29
PTPRR-204ENST00000440835 CCDC96Q2M329 555 aa7□□□□□ -1.29
PTPRR-204ENST00000440835 KATNAL1Q9BW62 490 aa7□□□□□ -1.29
PTPRR-204ENST00000440835 PPP1R12CQ9BZL4 782 aa7□□□□□ -1.29
PTPRR-204ENST00000440835 HOMER2Q9NSB8 354 aa7□□□□□ -1.29
PTPRR-204ENST00000440835 C11orf97A0A1B0GVM6 126 aaPredicted RBP7□□□□□ -1.29
PTPRR-204ENST00000440835 TRAK2O60296 914 aa7□□□□□ -1.29
PTPRR-204ENST00000440835 RANBP6O60518 1105 aaKnown RBP7□□□□□ -1.29
PTPRR-204ENST00000440835 ATP2A2P16615 1042 aaKnown RBP7□□□□□ -1.29
PTPRR-204ENST00000440835 BEX3Q00994 111 aa7□□□□□ -1.29
PTPRR-204ENST00000440835 GHRHRQ02643 423 aa7□□□□□ -1.29
PTPRR-204ENST00000440835 ZNF543Q08ER8 600 aa7□□□□□ -1.29
PTPRR-204ENST00000440835 MUM1L1Q5H9M0 696 aa7□□□□□ -1.29
PTPRR-204ENST00000440835 TMEM67Q5HYA8 995 aa7□□□□□ -1.29
PTPRR-204ENST00000440835 PPP2R2DQ66LE6 453 aa7□□□□□ -1.29
PTPRR-204ENST00000440835 RNF207Q6ZRF8 634 aa7□□□□□ -1.29
PTPRR-204ENST00000440835 OR6J1Q8NGC5 347 aa7□□□□□ -1.29
PTPRR-204ENST00000440835 WNT8AQ9H1J5 351 aa7□□□□□ -1.29
PTPRR-204ENST00000440835 NKX2-4Q9H2Z4 354 aa7□□□□□ -1.29
PTPRR-204ENST00000440835 CUL9Q8IWT3 2517 aa7□□□□□ -1.29
PTPRR-204ENST00000440835 OFD1O75665 1012 aa7□□□□□ -1.29
PTPRR-204ENST00000440835 CHGBP05060 677 aa7□□□□□ -1.29
PTPRR-204ENST00000440835 BAATQ14032 418 aaPredicted RBP7□□□□□ -1.29
PTPRR-204ENST00000440835 ASPRV1Q53RT3 343 aa7□□□□□ -1.29
PTPRR-204ENST00000440835 NSMFQ6X4W1 530 aa7□□□□□ -1.29
PTPRR-204ENST00000440835 KCTD1Q719H9 257 aa7□□□□□ -1.29
PTPRR-204ENST00000440835 SMC5Q8IY18 1101 aa7□□□□□ -1.29
PTPRR-204ENST00000440835 CLEC4DQ8WXI8 215 aa7□□□□□ -1.29
PTPRR-204ENST00000440835 ESR2Q92731 530 aa7□□□□□ -1.29
PTPRR-204ENST00000440835 TMEM47Q9BQJ4 181 aa7□□□□□ -1.29
PTPRR-204ENST00000440835 ISY1Q9ULR0 285 aaKnown RBP7□□□□□ -1.29
PTPRR-204ENST00000440835 RANBP2P49792 3224 aaKnown RBP6.99□□□□□ -1.29
PTPRR-204ENST00000440835 MAFGO15525 162 aa6.99□□□□□ -1.29
PTPRR-204ENST00000440835 CAND2O75155 1236 aa6.99□□□□□ -1.29
PTPRR-204ENST00000440835 PDHBP11177 359 aa6.99□□□□□ -1.29
PTPRR-204ENST00000440835 DMTNQ08495 405 aa6.99□□□□□ -1.29
PTPRR-204ENST00000440835 MFSD6Q6ZSS7 791 aa6.99□□□□□ -1.29
PTPRR-204ENST00000440835 GAS2L3Q86XJ1 694 aa6.99□□□□□ -1.29
PTPRR-204ENST00000440835 FBXO16Q8IX29 292 aaPredicted RBP6.99□□□□□ -1.29
PTPRR-204ENST00000440835 TRIM44Q96DX7 344 aaPredicted RBP6.99□□□□□ -1.29
PTPRR-204ENST00000440835 SAMD11Q96NU1 681 aa6.99□□□□□ -1.29
PTPRR-204ENST00000440835 PRDM12Q9H4Q4 367 aa6.99□□□□□ -1.29
PTPRR-204ENST00000440835 GH1P01241 217 aa6.99□□□□□ -1.29
PTPRR-204ENST00000440835 ACRP10323 421 aa6.99□□□□□ -1.29
PTPRR-204ENST00000440835 BECN1Q14457 450 aa6.99□□□□□ -1.29
PTPRR-204ENST00000440835 PUS10Q3MIT2 529 aaKnown RBP6.99□□□□□ -1.29
PTPRR-204ENST00000440835 ADAMTS19Q8TE59 1207 aa6.99□□□□□ -1.29
PTPRR-204ENST00000440835 NSUN6Q8TEA1 469 aaKnown RBP6.99□□□□□ -1.29
PTPRR-204ENST00000440835 MAP7D2Q96T17 732 aa6.99□□□□□ -1.29
PTPRR-204ENST00000440835 TRPV6Q9H1D0 765 aa6.99□□□□□ -1.29
PTPRR-204ENST00000440835 PRDM16Q9HAZ2 1276 aa6.99□□□□□ -1.29
PTPRR-204ENST00000440835 MRPL11Q9Y3B7 192 aaKnown RBP6.99□□□□□ -1.29
PTPRR-204ENST00000440835 CCDC171Q6TFL3 1326 aa6.98□□□□□ -1.29
PTPRR-204ENST00000440835 EMSYQ7Z589 1322 aa6.98□□□□□ -1.29
PTPRR-204ENST00000440835 ABHD14A-ACY1A0A1B0GW23 586 aa6.98□□□□□ -1.29
PTPRR-204ENST00000440835 PTPDC1A2A3K4 754 aa6.98□□□□□ -1.29
PTPRR-204ENST00000440835 FOXP2O15409 715 aa6.98□□□□□ -1.29
PTPRR-204ENST00000440835 CXCL10P02778 98 aa6.98□□□□□ -1.29
PTPRR-204ENST00000440835 MYL3P08590 195 aa6.98□□□□□ -1.29
PTPRR-204ENST00000440835 IQCF3P0C7M6 154 aa6.98□□□□□ -1.29
PTPRR-204ENST00000440835 ZSCAN20P17040 1043 aaPredicted RBP6.98□□□□□ -1.29
PTPRR-204ENST00000440835 CASTP20810 708 aaKnown RBP6.98□□□□□ -1.29
PTPRR-204ENST00000440835 PBX2P40425 430 aa6.98□□□□□ -1.29
PTPRR-204ENST00000440835 PDE1AP54750 535 aa6.98□□□□□ -1.29
PTPRR-204ENST00000440835 UTP14CQ5TAP6 766 aaKnown RBP6.98□□□□□ -1.29
PTPRR-204ENST00000440835 CNKSR3Q6P9H4 555 aa6.98□□□□□ -1.29
PTPRR-204ENST00000440835 IQCA1Q86XH1 822 aa6.98□□□□□ -1.29
PTPRR-204ENST00000440835 USP38Q8NB14 1042 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms