RNA–Protein interactions for RNA: ENST00000440452.5

PCGF3-207, Transcript of polycomb group ring finger 3, humanhuman

TSL 2

Gene PCGF3, Length 3,609 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-207ENST00000440452 CCDC42Q96M95 316 aa13.76□□□□□ -0.21
PCGF3-207ENST00000440452 NLRC4Q9NPP4 1024 aa13.76□□□□□ -0.21
PCGF3-207ENST00000440452 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.76□□□□□ -0.21
PCGF3-207ENST00000440452 HGSO14964 777 aaPredicted RBP13.75□□□□□ -0.21
PCGF3-207ENST00000440452 SYF2O95926 243 aaKnown RBP13.75□□□□□ -0.21
PCGF3-207ENST00000440452 BTDP43251 543 aa13.75□□□□□ -0.21
PCGF3-207ENST00000440452 SEC24CP53992 1094 aa13.75□□□□□ -0.21
PCGF3-207ENST00000440452 NAA15Q9BXJ9 866 aaKnown RBP13.75□□□□□ -0.21
PCGF3-207ENST00000440452 RAB21Q9UL25 225 aa13.75□□□□□ -0.21
PCGF3-207ENST00000440452 SLC16A2P36021 539 aa13.75□□□□□ -0.21
PCGF3-207ENST00000440452 KIF5AQ12840 1032 aa13.75□□□□□ -0.21
PCGF3-207ENST00000440452 STK4Q13043 487 aa13.75□□□□□ -0.21
PCGF3-207ENST00000440452 CDKAL1Q5VV42 579 aa13.75□□□□□ -0.21
PCGF3-207ENST00000440452 CACNA2D4Q7Z3S7 1137 aa13.75□□□□□ -0.21
PCGF3-207ENST00000440452 PNMA8AQ86V59 439 aaPredicted RBP13.75□□□□□ -0.21
PCGF3-207ENST00000440452 C2CD5Q86YS7 1000 aa13.75□□□□□ -0.21
PCGF3-207ENST00000440452 TBCKQ8TEA7 893 aa13.75□□□□□ -0.21
PCGF3-207ENST00000440452 PSEN1P49768 467 aa13.75□□□□□ -0.21
PCGF3-207ENST00000440452 TUBB2AQ13885 445 aa13.75□□□□□ -0.21
PCGF3-207ENST00000440452 RCSD1Q6JBY9 416 aa13.75□□□□□ -0.21
PCGF3-207ENST00000440452 PDXDC2PQ6P474 469 aa13.75□□□□□ -0.21
PCGF3-207ENST00000440452 NELFCDQ8IXH7 590 aa13.75□□□□□ -0.21
PCGF3-207ENST00000440452 CALML4Q96GE6 196 aa13.75□□□□□ -0.21
PCGF3-207ENST00000440452 CNOT6LQ96LI5 555 aaKnown RBP13.75□□□□□ -0.21
PCGF3-207ENST00000440452 TUBB2BQ9BVA1 445 aa13.75□□□□□ -0.21
PCGF3-207ENST00000440452 A0A1B0GUA9 196 aa13.74□□□□□ -0.21
PCGF3-207ENST00000440452 ESYT3A0FGR9 886 aa13.74□□□□□ -0.21
PCGF3-207ENST00000440452 POTEMA6NI47 508 aa13.74□□□□□ -0.21
PCGF3-207ENST00000440452 KRT18P05783 430 aaKnown RBP13.74□□□□□ -0.21
PCGF3-207ENST00000440452 ELF1P32519 619 aa13.74□□□□□ -0.21
PCGF3-207ENST00000440452 ARHGAP25P42331 645 aa13.74□□□□□ -0.21
PCGF3-207ENST00000440452 SPTY2D1Q68D10 685 aaPredicted RBP13.74□□□□□ -0.21
PCGF3-207ENST00000440452 ANAPC4Q9UJX5 808 aa13.74□□□□□ -0.21
PCGF3-207ENST00000440452 PCDHA6Q9UN73 950 aa13.74□□□□□ -0.21
PCGF3-207ENST00000440452 PCDHA8Q9Y5H6 950 aa13.74□□□□□ -0.21
PCGF3-207ENST00000440452 CYTH3O43739 400 aa13.74□□□□□ -0.21
PCGF3-207ENST00000440452 KRT14P02533 472 aa13.74□□□□□ -0.21
PCGF3-207ENST00000440452 PLEKP08567 350 aaPredicted RBP13.74□□□□□ -0.21
PCGF3-207ENST00000440452 LONP1P36776 959 aaKnown RBP13.74□□□□□ -0.21
PCGF3-207ENST00000440452 APTXQ7Z2E3 356 aaKnown RBP13.74□□□□□ -0.21
PCGF3-207ENST00000440452 MB21D1Q8N884 522 aa13.74□□□□□ -0.21
PCGF3-207ENST00000440452 ANKRD2Q9GZV1 360 aa13.74□□□□□ -0.21
PCGF3-207ENST00000440452 MYH2Q9UKX2 1941 aa13.74□□□□□ -0.21
PCGF3-207ENST00000440452 MYBL2P10244 700 aa13.73□□□□□ -0.21
PCGF3-207ENST00000440452 PAX7P23759 505 aa13.73□□□□□ -0.21
PCGF3-207ENST00000440452 NONOQ15233 471 aaKnown RBP eCLIP13.73□□□□□ -0.212e-6■■■□□ 18.5
PCGF3-207ENST00000440452 EZH2Q15910 746 aaKnown RBP13.73□□□□□ -0.21
PCGF3-207ENST00000440452 MFSD14BQ5SR56 506 aa13.73□□□□□ -0.21
PCGF3-207ENST00000440452 PRPF38AQ8NAV1 312 aaKnown RBP13.73□□□□□ -0.21
PCGF3-207ENST00000440452 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.73□□□□□ -0.21
PCGF3-207ENST00000440452 ADAMTS7Q9UKP4 1686 aa13.73□□□□□ -0.21
PCGF3-207ENST00000440452 H7C1D1 291 aa13.73□□□□□ -0.21
PCGF3-207ENST00000440452 CHUKO15111 745 aa13.73□□□□□ -0.21
PCGF3-207ENST00000440452 VAV2P52735 878 aa13.73□□□□□ -0.21
PCGF3-207ENST00000440452 APBA1Q02410 837 aa13.73□□□□□ -0.21
PCGF3-207ENST00000440452 NNTQ13423 1086 aa13.73□□□□□ -0.21
PCGF3-207ENST00000440452 UBE2SQ16763 222 aa13.73□□□□□ -0.21
PCGF3-207ENST00000440452 CCDC40Q4G0X9 1142 aa13.73□□□□□ -0.21
PCGF3-207ENST00000440452 C8orf74Q6P047 294 aa13.73□□□□□ -0.21
PCGF3-207ENST00000440452 FBXO33Q7Z6M2 555 aa13.73□□□□□ -0.21
PCGF3-207ENST00000440452 ZSCAN29Q8IWY8 852 aaPredicted RBP13.73□□□□□ -0.21
PCGF3-207ENST00000440452 CCDC43Q96MW1 224 aaKnown RBP13.73□□□□□ -0.21
PCGF3-207ENST00000440452 TACO1Q9BSH4 297 aaKnown RBP13.73□□□□□ -0.21
PCGF3-207ENST00000440452 C6orf50Q9HD87 102 aa13.73□□□□□ -0.21
PCGF3-207ENST00000440452 AKAP11Q9UKA4 1901 aa13.73□□□□□ -0.21
PCGF3-207ENST00000440452 NKRFO15226 690 aaKnown RBP eCLIP13.73□□□□□ -0.21
PCGF3-207ENST00000440452 EIF3HO15372 352 aaKnown RBP eCLIP13.73□□□□□ -0.212e-6■■■□□ 18.5
PCGF3-207ENST00000440452 BUB1O43683 1085 aa13.73□□□□□ -0.21
PCGF3-207ENST00000440452 SCNN1DP51172 638 aa13.73□□□□□ -0.21
PCGF3-207ENST00000440452 RBM5P52756 815 aaKnown RBP eCLIP13.73□□□□□ -0.211e-8■■■■■ 31
PCGF3-207ENST00000440452 NAIF1Q69YI7 327 aaPredicted RBP13.73□□□□□ -0.21
PCGF3-207ENST00000440452 ANKRD40Q6AI12 368 aa13.73□□□□□ -0.21
PCGF3-207ENST00000440452 SH3RF1Q7Z6J0 888 aa13.73□□□□□ -0.21
PCGF3-207ENST00000440452 TAX1BP1Q86VP1 789 aa13.73□□□□□ -0.21
PCGF3-207ENST00000440452 CCDC155Q8N6L0 562 aa13.73□□□□□ -0.21
PCGF3-207ENST00000440452 CNBD1Q8NA66 436 aa13.73□□□□□ -0.21
PCGF3-207ENST00000440452 ARL8AQ96BM9 186 aa13.73□□□□□ -0.21
PCGF3-207ENST00000440452 LRWD1Q9UFC0 647 aa13.73□□□□□ -0.21
PCGF3-207ENST00000440452 OR52Z1P0C646 297 aa13.72□□□□□ -0.21
PCGF3-207ENST00000440452 CYLC1P35663 651 aaPredicted RBP13.72□□□□□ -0.21
PCGF3-207ENST00000440452 MSL1Q68DK7 614 aa13.72□□□□□ -0.21
PCGF3-207ENST00000440452 RRAGAQ7L523 313 aa13.72□□□□□ -0.21
PCGF3-207ENST00000440452 SPATA20Q8TB22 786 aa13.72□□□□□ -0.21
PCGF3-207ENST00000440452 NYXQ9GZU5 481 aa13.72□□□□□ -0.21
PCGF3-207ENST00000440452 COL1A1P02452 1464 aaPredicted RBP13.72□□□□□ -0.21
PCGF3-207ENST00000440452 USP17L5A8MUK1 530 aa13.72□□□□□ -0.21
PCGF3-207ENST00000440452 EPS15P42566 896 aa13.72□□□□□ -0.21
PCGF3-207ENST00000440452 C12orf60Q5U649 245 aa13.72□□□□□ -0.21
PCGF3-207ENST00000440452 MICAL1Q8TDZ2 1067 aa13.72□□□□□ -0.21
PCGF3-207ENST00000440452 SPATA31A1Q5TZJ5 1347 aa13.72□□□□□ -0.21
PCGF3-207ENST00000440452 FAM196BA6NMK8 535 aa13.72□□□□□ -0.21
PCGF3-207ENST00000440452 GNAQP50148 359 aa13.72□□□□□ -0.21
PCGF3-207ENST00000440452 GTF2IP78347 998 aa13.72□□□□□ -0.21
PCGF3-207ENST00000440452 SF3B3Q15393 1217 aaKnown RBP13.72□□□□□ -0.21
PCGF3-207ENST00000440452 REXO1Q8N1G1 1221 aaKnown RBP13.72□□□□□ -0.21
PCGF3-207ENST00000440452 ARHGEF1Q92888 912 aaKnown RBP13.72□□□□□ -0.21
PCGF3-207ENST00000440452 CEP95Q96GE4 821 aa13.72□□□□□ -0.21
PCGF3-207ENST00000440452 LACRTQ9GZZ8 138 aa13.72□□□□□ -0.21
PCGF3-207ENST00000440452 CCDC113Q9H0I3 377 aa13.72□□□□□ -0.21
PCGF3-207ENST00000440452 BAZ2AQ9UIF9 1905 aaKnown RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms