RNA–Protein interactions for RNA: ENST00000439775.1

SNRPD3-204, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 3

Gene SNRPD3, Length 640 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-204ENST00000439775 HSD17B4P51659 736 aa18.93■□□□□ 0.62
SNRPD3-204ENST00000439775 TROAPQ12815 778 aa18.93■□□□□ 0.62
SNRPD3-204ENST00000439775 WTAPQ15007 396 aa18.93■□□□□ 0.62
SNRPD3-204ENST00000439775 MB21D2Q8IYB1 491 aaPredicted RBP18.93■□□□□ 0.62
SNRPD3-204ENST00000439775 GUCD1Q96NT3 240 aa18.93■□□□□ 0.62
SNRPD3-204ENST00000439775 TAAR1Q96RJ0 339 aa18.93■□□□□ 0.62
SNRPD3-204ENST00000439775 RMDN3Q96TC7 470 aa18.93■□□□□ 0.62
SNRPD3-204ENST00000439775 PPP1R12CQ9BZL4 782 aa18.93■□□□□ 0.62
SNRPD3-204ENST00000439775 HIPK3Q9H422 1215 aa18.93■□□□□ 0.62
SNRPD3-204ENST00000439775 MAP3K20Q9NYL2 800 aaKnown RBP18.93■□□□□ 0.62
SNRPD3-204ENST00000439775 RBM8AQ9Y5S9 174 aaKnown RBP18.93■□□□□ 0.62
SNRPD3-204ENST00000439775 TMEM265A0A087WTH1 108 aa18.92■□□□□ 0.62
SNRPD3-204ENST00000439775 KPNA6O60684 536 aa18.92■□□□□ 0.62
SNRPD3-204ENST00000439775 PPP1R11O60927 126 aaPredicted RBP18.92■□□□□ 0.62
SNRPD3-204ENST00000439775 ARIH2O95376 493 aa18.92■□□□□ 0.62
SNRPD3-204ENST00000439775 CSF2RAP15509 400 aa18.92■□□□□ 0.62
SNRPD3-204ENST00000439775 TRAF1Q13077 416 aa18.92■□□□□ 0.62
SNRPD3-204ENST00000439775 STXBP2Q15833 593 aa18.92■□□□□ 0.62
SNRPD3-204ENST00000439775 CCDC62Q6P9F0 684 aa18.92■□□□□ 0.62
SNRPD3-204ENST00000439775 PSRC1Q6PGN9 363 aaPredicted RBP18.92■□□□□ 0.62
SNRPD3-204ENST00000439775 SAMD3Q8N6K7 520 aa18.92■□□□□ 0.62
SNRPD3-204ENST00000439775 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.92■□□□□ 0.627e-14■□□□□ 10.1
SNRPD3-204ENST00000439775 MTG1Q9BT17 334 aaPredicted RBP18.92■□□□□ 0.62
SNRPD3-204ENST00000439775 NOC4LQ9BVI4 516 aaKnown RBP18.92■□□□□ 0.62
SNRPD3-204ENST00000439775 ALDH8A1Q9H2A2 487 aaPredicted RBP18.92■□□□□ 0.62
SNRPD3-204ENST00000439775 RIOX1Q9H6W3 641 aa18.92■□□□□ 0.62
SNRPD3-204ENST00000439775 SENP2Q9HC62 589 aa18.92■□□□□ 0.62
SNRPD3-204ENST00000439775 GPHNQ9NQX3 736 aaPredicted RBP18.92■□□□□ 0.62
SNRPD3-204ENST00000439775 CDH23Q9H251 3354 aa18.91■□□□□ 0.62
SNRPD3-204ENST00000439775 CFBP00751 764 aa18.91■□□□□ 0.62
SNRPD3-204ENST00000439775 MYL3P08590 195 aa18.91■□□□□ 0.62
SNRPD3-204ENST00000439775 CYP2C18P33260 490 aa18.91■□□□□ 0.62
SNRPD3-204ENST00000439775 ANTXR2P58335 489 aa18.91■□□□□ 0.62
SNRPD3-204ENST00000439775 SLC35G1Q2M3R5 365 aa18.91■□□□□ 0.62
SNRPD3-204ENST00000439775 TMEM67Q5HYA8 995 aa18.91■□□□□ 0.62
SNRPD3-204ENST00000439775 TMEM240Q5SV17 173 aa18.91■□□□□ 0.62
SNRPD3-204ENST00000439775 C16orf59Q7L2K0 433 aa18.91■□□□□ 0.62
SNRPD3-204ENST00000439775 COPS5Q92905 334 aa18.91■□□□□ 0.62
SNRPD3-204ENST00000439775 MTA3Q9BTC8 594 aa18.91■□□□□ 0.62
SNRPD3-204ENST00000439775 TRPV6Q9H1D0 765 aa18.91■□□□□ 0.62
SNRPD3-204ENST00000439775 PXMP2Q9NR77 195 aa18.91■□□□□ 0.62
SNRPD3-204ENST00000439775 PCDHA1Q9Y5I3 950 aa18.91■□□□□ 0.62
SNRPD3-204ENST00000439775 MYH6P13533 1939 aa18.9■□□□□ 0.62
SNRPD3-204ENST00000439775 RASIP1Q5U651 963 aa18.9■□□□□ 0.62
SNRPD3-204ENST00000439775 ARHGEF16Q5VV41 709 aa18.9■□□□□ 0.62
SNRPD3-204ENST00000439775 CHST3Q7LGC8 479 aa18.9■□□□□ 0.62
SNRPD3-204ENST00000439775 CATIPQ7Z7H3 387 aa18.9■□□□□ 0.62
SNRPD3-204ENST00000439775 IGDCC4Q8TDY8 1250 aa18.9■□□□□ 0.62
SNRPD3-204ENST00000439775 LSG1Q9H089 658 aaKnown RBP18.9■□□□□ 0.62
SNRPD3-204ENST00000439775 SCN10AQ9Y5Y9 1956 aa18.9■□□□□ 0.62
SNRPD3-204ENST00000439775 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.89■□□□□ 0.61
SNRPD3-204ENST00000439775 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.89■□□□□ 0.61
SNRPD3-204ENST00000439775 CYTH3O43739 400 aa18.89■□□□□ 0.61
SNRPD3-204ENST00000439775 EIF3JO75822 258 aaKnown RBP18.89■□□□□ 0.61
SNRPD3-204ENST00000439775 GH1P01241 217 aa18.89■□□□□ 0.61
SNRPD3-204ENST00000439775 SUPT20HL2P0C7V6 817 aa18.89■□□□□ 0.61
SNRPD3-204ENST00000439775 EIF2AK2P19525 551 aaKnown RBP18.89■□□□□ 0.61
SNRPD3-204ENST00000439775 NFRKBQ6P4R8 1299 aa18.89■□□□□ 0.61
SNRPD3-204ENST00000439775 SEPT14Q6ZU15 432 aa18.89■□□□□ 0.61
SNRPD3-204ENST00000439775 CENPQQ7L2Z9 268 aaPredicted RBP18.89■□□□□ 0.61
SNRPD3-204ENST00000439775 HOMER1Q86YM7 354 aa18.89■□□□□ 0.61
SNRPD3-204ENST00000439775 FAM161BQ96MY7 647 aa18.89■□□□□ 0.61
SNRPD3-204ENST00000439775 PIGSQ96S52 555 aa18.89■□□□□ 0.61
SNRPD3-204ENST00000439775 MAP3K14Q99558 947 aa18.89■□□□□ 0.61
SNRPD3-204ENST00000439775 ESYT1Q9BSJ8 1104 aa18.89■□□□□ 0.61
SNRPD3-204ENST00000439775 SEMA6BQ9H3T3 888 aa18.89■□□□□ 0.61
SNRPD3-204ENST00000439775 IL23AQ9NPF7 189 aa18.89■□□□□ 0.61
SNRPD3-204ENST00000439775 UMODL1Q5DID0 1318 aa18.89■□□□□ 0.61
SNRPD3-204ENST00000439775 PNMA6FA0A0J9YX94 578 aa18.88■□□□□ 0.61
SNRPD3-204ENST00000439775 DDAH1O94760 285 aa18.88■□□□□ 0.61
SNRPD3-204ENST00000439775 NR3C2P08235 984 aa18.88■□□□□ 0.61
SNRPD3-204ENST00000439775 PTPN11Q06124 597 aaPredicted RBP18.88■□□□□ 0.61
SNRPD3-204ENST00000439775 ARHGAP1Q07960 439 aa18.88■□□□□ 0.61
SNRPD3-204ENST00000439775 BMP2KLQ5H9B9 411 aa18.88■□□□□ 0.61
SNRPD3-204ENST00000439775 SLC17A8Q8NDX2 589 aa18.88■□□□□ 0.61
SNRPD3-204ENST00000439775 EMID1Q96A84 441 aaPredicted RBP18.88■□□□□ 0.61
SNRPD3-204ENST00000439775 PDCD2LQ9BRP1 358 aa18.88■□□□□ 0.61
SNRPD3-204ENST00000439775 WNT8AQ9H1J5 351 aa18.88■□□□□ 0.61
SNRPD3-204ENST00000439775 TTYH1Q9H313 450 aaPredicted RBP18.88■□□□□ 0.61
SNRPD3-204ENST00000439775 LY9Q9HBG7 655 aa18.88■□□□□ 0.61
SNRPD3-204ENST00000439775 TRMT13Q9NUP7 481 aaKnown RBP18.88■□□□□ 0.61
SNRPD3-204ENST00000439775 MMP3P08254 477 aa18.87■□□□□ 0.61
SNRPD3-204ENST00000439775 ACRP10323 421 aa18.87■□□□□ 0.61
SNRPD3-204ENST00000439775 LY6KQ17RY6 165 aa18.87■□□□□ 0.61
SNRPD3-204ENST00000439775 NBPF20Q3BBV1 942 aa18.87■□□□□ 0.61
SNRPD3-204ENST00000439775 CASC1Q6TDU7 716 aa18.87■□□□□ 0.61
SNRPD3-204ENST00000439775 ZNF365Q70YC5 407 aa18.87■□□□□ 0.61
SNRPD3-204ENST00000439775 ZNF654Q8IZM8 581 aa18.87■□□□□ 0.61
SNRPD3-204ENST00000439775 HERVK_113Q902F9 699 aa18.87■□□□□ 0.61
SNRPD3-204ENST00000439775 GCOM1H8Y6P7 765 aaPredicted RBP18.86■□□□□ 0.61
SNRPD3-204ENST00000439775 POLR2MP0CAP2 368 aa18.86■□□□□ 0.61
SNRPD3-204ENST00000439775 DNAJB2P25686 324 aa18.86■□□□□ 0.61
SNRPD3-204ENST00000439775 MCM5P33992 734 aa18.86■□□□□ 0.61
SNRPD3-204ENST00000439775 CCL23P55773 120 aa18.86■□□□□ 0.61
SNRPD3-204ENST00000439775 AFG1LQ8WV93 481 aa18.86■□□□□ 0.61
SNRPD3-204ENST00000439775 TMEM87BQ96K49 555 aa18.86■□□□□ 0.61
SNRPD3-204ENST00000439775 CDX2Q99626 313 aaPredicted RBP18.86■□□□□ 0.61
SNRPD3-204ENST00000439775 SPZ1Q9BXG8 430 aa18.86■□□□□ 0.61
SNRPD3-204ENST00000439775 MTIF3Q9H2K0 278 aaKnown RBP18.86■□□□□ 0.61
SNRPD3-204ENST00000439775 DDX41Q9UJV9 622 aaKnown RBP18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 112.7 ms