RNA–Protein interactions for RNA: ENST00000439128.6

NEK1-201, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,653 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-201ENST00000439128 SPECC1LQ69YQ0 1117 aa13.29□□□□□ -0.28
NEK1-201ENST00000439128 FAM149B1Q96BN6 582 aa13.29□□□□□ -0.28
NEK1-201ENST00000439128 CCDC94Q9BW85 323 aaPredicted RBP13.29□□□□□ -0.28
NEK1-201ENST00000439128 RRAGCQ9HB90 399 aa13.29□□□□□ -0.28
NEK1-201ENST00000439128 SLC8A2Q9UPR5 921 aa13.29□□□□□ -0.28
NEK1-201ENST00000439128 IQSEC2Q5JU85 1478 aa13.29□□□□□ -0.28
NEK1-201ENST00000439128 SSH2Q76I76 1423 aa13.29□□□□□ -0.28
NEK1-201ENST00000439128 POLR2BP30876 1174 aaKnown RBP13.28□□□□□ -0.28
NEK1-201ENST00000439128 MCAMP43121 646 aa13.28□□□□□ -0.28
NEK1-201ENST00000439128 CACNB1Q02641 598 aaPredicted RBP13.28□□□□□ -0.28
NEK1-201ENST00000439128 MYO1EQ12965 1108 aa13.28□□□□□ -0.28
NEK1-201ENST00000439128 PTGDRQ13258 359 aa13.28□□□□□ -0.28
NEK1-201ENST00000439128 PDZD4Q76G19 769 aaPredicted RBP13.28□□□□□ -0.28
NEK1-201ENST00000439128 PARD3BQ8TEW8 1205 aa13.28□□□□□ -0.28
NEK1-201ENST00000439128 STMN4Q9H169 189 aaPredicted RBP13.28□□□□□ -0.28
NEK1-201ENST00000439128 ARMCX3Q9UH62 379 aaPredicted RBP13.28□□□□□ -0.28
NEK1-201ENST00000439128 SCAF8Q9UPN6 1271 aaKnown RBP13.28□□□□□ -0.28
NEK1-201ENST00000439128 TET3O43151 1660 aa13.28□□□□□ -0.28
NEK1-201ENST00000439128 CLTCQ00610 1675 aaKnown RBP13.28□□□□□ -0.28
NEK1-201ENST00000439128 KIF28PB7ZC32 967 aa13.28□□□□□ -0.28
NEK1-201ENST00000439128 STAT3P40763 770 aa13.28□□□□□ -0.28
NEK1-201ENST00000439128 CBX1P83916 185 aa13.28□□□□□ -0.28
NEK1-201ENST00000439128 PNOCQ13519 176 aa13.28□□□□□ -0.28
NEK1-201ENST00000439128 C8orf34Q49A92 452 aa13.28□□□□□ -0.28
NEK1-201ENST00000439128 NSUN6Q8TEA1 469 aaKnown RBP13.28□□□□□ -0.28
NEK1-201ENST00000439128 PCDHB4Q9Y5E5 795 aa13.28□□□□□ -0.28
NEK1-201ENST00000439128 BNIP3LO60238 219 aa13.28□□□□□ -0.28
NEK1-201ENST00000439128 MYSM1Q5VVJ2 828 aa13.28□□□□□ -0.28
NEK1-201ENST00000439128 CCDC89Q8N998 374 aa13.28□□□□□ -0.28
NEK1-201ENST00000439128 SKA2Q8WVK7 121 aaPredicted RBP13.28□□□□□ -0.28
NEK1-201ENST00000439128 PPP2R3CQ969Q6 453 aa13.28□□□□□ -0.28
NEK1-201ENST00000439128 ACCSQ96QU6 501 aa13.28□□□□□ -0.28
NEK1-201ENST00000439128 IRAK4Q9NWZ3 460 aa13.28□□□□□ -0.28
NEK1-201ENST00000439128 TLDC2A0PJX2 215 aa13.28□□□□□ -0.28
NEK1-201ENST00000439128 CYP2E1P05181 493 aaPredicted RBP13.28□□□□□ -0.28
NEK1-201ENST00000439128 MTMR1Q13613 665 aa13.28□□□□□ -0.28
NEK1-201ENST00000439128 PDCL2Q8N4E4 241 aa13.28□□□□□ -0.28
NEK1-201ENST00000439128 RPF1Q9H9Y2 349 aaKnown RBP13.28□□□□□ -0.28
NEK1-201ENST00000439128 ADAM9Q13443 819 aa13.28□□□□□ -0.28
NEK1-201ENST00000439128 HADHQ16836 314 aaKnown RBP13.28□□□□□ -0.28
NEK1-201ENST00000439128 RSBN1LQ6PCB5 846 aaPredicted RBP13.28□□□□□ -0.28
NEK1-201ENST00000439128 U2AF1L4Q8WU68 220 aaKnown RBP13.28□□□□□ -0.28
NEK1-201ENST00000439128 DPF3Q92784 378 aa13.28□□□□□ -0.28
NEK1-201ENST00000439128 SPATA33Q96N06 139 aa13.28□□□□□ -0.28
NEK1-201ENST00000439128 ACAD9Q9H845 621 aa13.28□□□□□ -0.28
NEK1-201ENST00000439128 ESYT2A0FGR8 921 aa13.27□□□□□ -0.28
NEK1-201ENST00000439128 CCDC66A2RUB6 948 aa13.27□□□□□ -0.28
NEK1-201ENST00000439128 COPB2P35606 906 aa13.27□□□□□ -0.28
NEK1-201ENST00000439128 FAM26FQ5R3K3 315 aa13.27□□□□□ -0.28
NEK1-201ENST00000439128 C6orf163Q5TEZ5 329 aa13.27□□□□□ -0.28
NEK1-201ENST00000439128 STYK1Q6J9G0 422 aa13.27□□□□□ -0.28
NEK1-201ENST00000439128 TRMT44Q8IYL2 757 aaKnown RBP13.27□□□□□ -0.28
NEK1-201ENST00000439128 TCP11Q8WWU5 503 aa13.27□□□□□ -0.28
NEK1-201ENST00000439128 OSBP2Q969R2 916 aa13.27□□□□□ -0.28
NEK1-201ENST00000439128 PCIF1Q9H4Z3 704 aa13.27□□□□□ -0.28
NEK1-201ENST00000439128 NXF1Q9UBU9 619 aaKnown RBP13.27□□□□□ -0.28
NEK1-201ENST00000439128 PFKFB2O60825 505 aa13.27□□□□□ -0.28
NEK1-201ENST00000439128 GCFC2P16383 781 aaKnown RBP13.27□□□□□ -0.28
NEK1-201ENST00000439128 SAMD7Q7Z3H4 446 aa13.27□□□□□ -0.28
NEK1-201ENST00000439128 CCDC26Q8TAB7 109 aa13.27□□□□□ -0.28
NEK1-201ENST00000439128 ASB14A6NK59 587 aa13.27□□□□□ -0.29
NEK1-201ENST00000439128 STAT1P42224 750 aa13.27□□□□□ -0.29
NEK1-201ENST00000439128 STRIP1Q5VSL9 837 aa13.27□□□□□ -0.29
NEK1-201ENST00000439128 DDX23Q9BUQ8 820 aaKnown RBP13.27□□□□□ -0.29
NEK1-201ENST00000439128 KCNK9Q9NPC2 374 aa13.27□□□□□ -0.29
NEK1-201ENST00000439128 RRAGAQ7L523 313 aa13.27□□□□□ -0.29
NEK1-201ENST00000439128 THEM5Q8N1Q8 247 aa13.27□□□□□ -0.29
NEK1-201ENST00000439128 OR6J1Q8NGC5 347 aa13.27□□□□□ -0.29
NEK1-201ENST00000439128 BAG1Q99933 345 aaPredicted RBP13.27□□□□□ -0.29
NEK1-201ENST00000439128 CPSF3Q9UKF6 684 aaKnown RBP13.27□□□□□ -0.29
NEK1-201ENST00000439128 TULP4Q9NRJ4 1543 aa13.27□□□□□ -0.29
NEK1-201ENST00000439128 POLR3GO15318 223 aaPredicted RBP13.26□□□□□ -0.29
NEK1-201ENST00000439128 CETPP11597 493 aa13.26□□□□□ -0.29
NEK1-201ENST00000439128 GBP6Q6ZN66 633 aa13.26□□□□□ -0.29
NEK1-201ENST00000439128 PLA2R1Q13018 1463 aa13.26□□□□□ -0.29
NEK1-201ENST00000439128 ABCB11O95342 1321 aa13.26□□□□□ -0.29
NEK1-201ENST00000439128 CDHR2Q9BYE9 1310 aa13.26□□□□□ -0.29
NEK1-201ENST00000439128 PDIA3P30101 505 aaKnown RBP13.26□□□□□ -0.29
NEK1-201ENST00000439128 SLC12A2P55011 1212 aa13.26□□□□□ -0.29
NEK1-201ENST00000439128 CTTNQ14247 550 aaKnown RBP13.26□□□□□ -0.29
NEK1-201ENST00000439128 CYP26C1Q6V0L0 522 aa13.26□□□□□ -0.29
NEK1-201ENST00000439128 BBS5Q8N3I7 341 aa13.26□□□□□ -0.29
NEK1-201ENST00000439128 TM6SF1Q9BZW5 370 aa13.26□□□□□ -0.29
NEK1-201ENST00000439128 ABCB4P21439 1286 aa13.26□□□□□ -0.29
NEK1-201ENST00000439128 BFSP1Q12934 665 aa13.26□□□□□ -0.29
NEK1-201ENST00000439128 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.26□□□□□ -0.29
NEK1-201ENST00000439128 RAB20Q9NX57 234 aa13.26□□□□□ -0.29
NEK1-201ENST00000439128 ADCY10Q96PN6 1610 aa13.26□□□□□ -0.29
NEK1-201ENST00000439128 NLRP12P59046 1061 aa13.26□□□□□ -0.29
NEK1-201ENST00000439128 ZBTB16Q05516 673 aa13.26□□□□□ -0.29
NEK1-201ENST00000439128 NEDD9Q14511 834 aa13.26□□□□□ -0.29
NEK1-201ENST00000439128 FAM167AQ96KS9 214 aa13.26□□□□□ -0.29
NEK1-201ENST00000439128 A6NJR5 290 aa13.26□□□□□ -0.29
NEK1-201ENST00000439128 LONP1P36776 959 aaKnown RBP13.26□□□□□ -0.29
NEK1-201ENST00000439128 ZNF589Q86UQ0 364 aaPredicted RBP13.26□□□□□ -0.29
NEK1-201ENST00000439128 RNF139Q8WU17 664 aa13.26□□□□□ -0.29
NEK1-201ENST00000439128 RNF26Q9BY78 433 aaPredicted RBP13.26□□□□□ -0.29
NEK1-201ENST00000439128 LRRC4Q9HBW1 653 aa13.26□□□□□ -0.29
NEK1-201ENST00000439128 FNDC3AQ9Y2H6 1198 aaKnown RBP13.26□□□□□ -0.29
NEK1-201ENST00000439128 UTYO14607 1347 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms