RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 KLHL6Q8WZ60 621 aa4.97□□□□□ -1.61
HMGB1P18-201ENST00000438801 GPRASP2Q96D09 838 aa4.97□□□□□ -1.61
HMGB1P18-201ENST00000438801 TSPAN17Q96FV3 270 aa4.97□□□□□ -1.61
HMGB1P18-201ENST00000438801 FBLN5Q9UBX5 448 aa4.97□□□□□ -1.61
HMGB1P18-201ENST00000438801 CGGBP1Q9UFW8 167 aaPredicted RBP4.97□□□□□ -1.61
HMGB1P18-201ENST00000438801 BACE2Q9Y5Z0 518 aa4.97□□□□□ -1.61
HMGB1P18-201ENST00000438801 A0A1B0GTL3 188 aa4.96□□□□□ -1.62
HMGB1P18-201ENST00000438801 PMLP29590 882 aa4.96□□□□□ -1.62
HMGB1P18-201ENST00000438801 GRB10Q13322 594 aa4.96□□□□□ -1.62
HMGB1P18-201ENST00000438801 PPP2R5EQ16537 467 aa4.96□□□□□ -1.62
HMGB1P18-201ENST00000438801 B3GNT8Q7Z7M8 397 aa4.96□□□□□ -1.62
HMGB1P18-201ENST00000438801 CPNE8Q86YQ8 564 aa4.96□□□□□ -1.62
HMGB1P18-201ENST00000438801 ZNF526Q8TF50 670 aaPredicted RBP4.96□□□□□ -1.62
HMGB1P18-201ENST00000438801 RCC1LQ96I51 464 aaKnown RBP4.96□□□□□ -1.62
HMGB1P18-201ENST00000438801 SPATA25Q9BR10 227 aa4.96□□□□□ -1.62
HMGB1P18-201ENST00000438801 BCAS3Q9H6U6 928 aa4.96□□□□□ -1.62
HMGB1P18-201ENST00000438801 GULP1Q9UBP9 304 aa4.96□□□□□ -1.62
HMGB1P18-201ENST00000438801 NUDT5Q9UKK9 219 aa4.96□□□□□ -1.62
HMGB1P18-201ENST00000438801 SUGT1Q9Y2Z0 365 aa4.96□□□□□ -1.62
HMGB1P18-201ENST00000438801 TRBV23OR9-2A0A075B6M9 112 aa4.95□□□□□ -1.62
HMGB1P18-201ENST00000438801 NPHP3-ACAD11A0A0J9YXS1 232 aa4.95□□□□□ -1.62
HMGB1P18-201ENST00000438801 SH3D21A4FU49 640 aa4.95□□□□□ -1.62
HMGB1P18-201ENST00000438801 PRICKLE3O43900 615 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P18-201ENST00000438801 PPP1R11O60927 126 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P18-201ENST00000438801 PAMP19021 973 aa4.95□□□□□ -1.62
HMGB1P18-201ENST00000438801 PLP2Q04941 152 aa4.95□□□□□ -1.62
HMGB1P18-201ENST00000438801 TRIM26Q12899 539 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P18-201ENST00000438801 SLC9A5Q14940 896 aa4.95□□□□□ -1.62
HMGB1P18-201ENST00000438801 DBX2Q6ZNG2 339 aa4.95□□□□□ -1.62
HMGB1P18-201ENST00000438801 NETO2Q8NC67 525 aa4.95□□□□□ -1.62
HMGB1P18-201ENST00000438801 PEX11GQ96HA9 241 aa4.95□□□□□ -1.62
HMGB1P18-201ENST00000438801 SHDQ96IW2 340 aa4.95□□□□□ -1.62
HMGB1P18-201ENST00000438801 MTA3Q9BTC8 594 aa4.95□□□□□ -1.62
HMGB1P18-201ENST00000438801 JAG2Q9Y219 1238 aa4.95□□□□□ -1.62
HMGB1P18-201ENST00000438801 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P18-201ENST00000438801 NCAPD3P42695 1498 aa4.94□□□□□ -1.62
HMGB1P18-201ENST00000438801 CLASP1Q7Z460 1538 aa4.94□□□□□ -1.62
HMGB1P18-201ENST00000438801 ZNF608Q9ULD9 1512 aaPredicted RBP4.94□□□□□ -1.62
HMGB1P18-201ENST00000438801 GJA8P48165 433 aa4.94□□□□□ -1.62
HMGB1P18-201ENST00000438801 NASPP49321 788 aaPredicted RBP4.94□□□□□ -1.62
HMGB1P18-201ENST00000438801 CASP7P55210 303 aa4.94□□□□□ -1.62
HMGB1P18-201ENST00000438801 KRTAP10-2P60368 255 aa4.94□□□□□ -1.62
HMGB1P18-201ENST00000438801 NFKB2Q00653 900 aa4.94□□□□□ -1.62
HMGB1P18-201ENST00000438801 DLX2Q07687 328 aaPredicted RBP4.94□□□□□ -1.62
HMGB1P18-201ENST00000438801 RTP5Q14D33 572 aa4.94□□□□□ -1.62
HMGB1P18-201ENST00000438801 ZFYVE27Q5T4F4 411 aa4.94□□□□□ -1.62
HMGB1P18-201ENST00000438801 NT5DC1Q5TFE4 455 aa4.94□□□□□ -1.62
HMGB1P18-201ENST00000438801 WWC2Q6AWC2 1192 aa4.94□□□□□ -1.62
HMGB1P18-201ENST00000438801 KIAA1211LQ6NV74 962 aa4.94□□□□□ -1.62
HMGB1P18-201ENST00000438801 NT5DC4Q86YG4 428 aa4.94□□□□□ -1.62
HMGB1P18-201ENST00000438801 USP33Q8TEY7 942 aa4.94□□□□□ -1.62
HMGB1P18-201ENST00000438801 BDH2Q9BUT1 245 aa4.94□□□□□ -1.62
HMGB1P18-201ENST00000438801 USP40Q9NVE5 1235 aa4.94□□□□□ -1.62
HMGB1P18-201ENST00000438801 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.94□□□□□ -1.62
HMGB1P18-201ENST00000438801 AKT3Q9Y243 479 aa4.94□□□□□ -1.62
HMGB1P18-201ENST00000438801 C7orf72A4D263 438 aa4.93□□□□□ -1.62
HMGB1P18-201ENST00000438801 ANKRD34BA5PLL1 514 aa4.93□□□□□ -1.62
HMGB1P18-201ENST00000438801 ZBTB7AO95365 584 aa4.93□□□□□ -1.62
HMGB1P18-201ENST00000438801 ADRB1P08588 477 aa4.93□□□□□ -1.62
HMGB1P18-201ENST00000438801 UBXN11Q5T124 520 aa4.93□□□□□ -1.62
HMGB1P18-201ENST00000438801 VHLLQ6RSH7 139 aa4.93□□□□□ -1.62
HMGB1P18-201ENST00000438801 ZNF513Q8N8E2 541 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P18-201ENST00000438801 SMARCC2Q8TAQ2 1214 aa4.93□□□□□ -1.62
HMGB1P18-201ENST00000438801 CPLX3Q8WVH0 158 aa4.93□□□□□ -1.62
HMGB1P18-201ENST00000438801 CPA5Q8WXQ8 436 aa4.93□□□□□ -1.62
HMGB1P18-201ENST00000438801 NPHS1O60500 1241 aa4.92□□□□□ -1.62
HMGB1P18-201ENST00000438801 KCNH1O95259 989 aa4.92□□□□□ -1.62
HMGB1P18-201ENST00000438801 FUCA1P04066 466 aa4.92□□□□□ -1.62
HMGB1P18-201ENST00000438801 RBM10P98175 930 aaKnown RBP4.92□□□□□ -1.62
HMGB1P18-201ENST00000438801 HDLBPQ00341 1268 aaKnown RBP4.92□□□□□ -1.62
HMGB1P18-201ENST00000438801 CACNB2Q08289 660 aaPredicted RBP4.92□□□□□ -1.62
HMGB1P18-201ENST00000438801 EFEMP1Q12805 493 aa4.92□□□□□ -1.62
HMGB1P18-201ENST00000438801 SPATS1Q496A3 300 aa4.92□□□□□ -1.62
HMGB1P18-201ENST00000438801 C9orf131Q5VYM1 1079 aa4.92□□□□□ -1.62
HMGB1P18-201ENST00000438801 CARFQ8N187 725 aa4.92□□□□□ -1.62
HMGB1P18-201ENST00000438801 COPS5Q92905 334 aa4.92□□□□□ -1.62
HMGB1P18-201ENST00000438801 NOX5Q96PH1 765 aa4.92□□□□□ -1.62
HMGB1P18-201ENST00000438801 CLEC1BQ9P126 229 aa4.92□□□□□ -1.62
HMGB1P18-201ENST00000438801 APEX2Q9UBZ4 518 aa4.92□□□□□ -1.62
HMGB1P18-201ENST00000438801 NTRK1P04629 796 aa4.91□□□□□ -1.62
HMGB1P18-201ENST00000438801 PLS3P13797 630 aa4.91□□□□□ -1.62
HMGB1P18-201ENST00000438801 SCRN1Q12765 414 aa4.91□□□□□ -1.62
HMGB1P18-201ENST00000438801 POMZP3Q6PJE2 187 aa4.91□□□□□ -1.62
HMGB1P18-201ENST00000438801 GGNQ86UU5 652 aa4.91□□□□□ -1.62
HMGB1P18-201ENST00000438801 FERMT3Q86UX7 667 aa4.91□□□□□ -1.62
HMGB1P18-201ENST00000438801 CRACR2BQ8N4Y2 399 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P18-201ENST00000438801 FAM169BQ8N8A8 192 aa4.91□□□□□ -1.62
HMGB1P18-201ENST00000438801 BVESQ8NE79 360 aa4.91□□□□□ -1.62
HMGB1P18-201ENST00000438801 SEC16BQ96JE7 1060 aa4.91□□□□□ -1.62
HMGB1P18-201ENST00000438801 APBA2Q99767 749 aa4.91□□□□□ -1.62
HMGB1P18-201ENST00000438801 GPRC5CQ9NQ84 441 aa4.91□□□□□ -1.62
HMGB1P18-201ENST00000438801 SPATA6Q9NWH7 488 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P18-201ENST00000438801 NTMQ9P121 344 aa4.91□□□□□ -1.62
HMGB1P18-201ENST00000438801 EMC9Q9Y3B6 208 aa4.91□□□□□ -1.62
HMGB1P18-201ENST00000438801 SIT1Q9Y3P8 196 aa4.91□□□□□ -1.62
HMGB1P18-201ENST00000438801 NOBOXO60393 691 aa4.9□□□□□ -1.63
HMGB1P18-201ENST00000438801 SARSP49591 514 aaKnown RBP4.9□□□□□ -1.63
HMGB1P18-201ENST00000438801 MBLAC2Q68D91 279 aa4.9□□□□□ -1.63
HMGB1P18-201ENST00000438801 TTLL7Q6ZT98 887 aa4.9□□□□□ -1.63
HMGB1P18-201ENST00000438801 DCP2Q8IU60 420 aaKnown RBP4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms