RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 PHC3Q8NDX5 983 aa4.58□□□□□ -1.68
HMGB1P12-201ENST00000438594 SVIPQ8NHG7 77 aa4.58□□□□□ -1.68
HMGB1P12-201ENST00000438594 PPM1EQ8WY54 764 aa4.58□□□□□ -1.68
HMGB1P12-201ENST00000438594 SRPK1Q96SB4 655 aaKnown RBP4.58□□□□□ -1.68
HMGB1P12-201ENST00000438594 CEP89Q96ST8 783 aa4.58□□□□□ -1.68
HMGB1P12-201ENST00000438594 PCGF6Q9BYE7 350 aa4.58□□□□□ -1.68
HMGB1P12-201ENST00000438594 HOMER2Q9NSB8 354 aa4.58□□□□□ -1.68
HMGB1P12-201ENST00000438594 TNFRSF10DQ9UBN6 386 aa4.58□□□□□ -1.68
HMGB1P12-201ENST00000438594 NAP1L2Q9ULW6 460 aaPredicted RBP4.58□□□□□ -1.68
HMGB1P12-201ENST00000438594 TSPAN6O43657 245 aa4.57□□□□□ -1.68
HMGB1P12-201ENST00000438594 F13A1P00488 732 aa4.57□□□□□ -1.68
HMGB1P12-201ENST00000438594 FOSP01100 380 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P12-201ENST00000438594 FAM163BP0C2L3 166 aa4.57□□□□□ -1.68
HMGB1P12-201ENST00000438594 MASP1P48740 699 aa4.57□□□□□ -1.68
HMGB1P12-201ENST00000438594 SLURP1P55000 103 aa4.57□□□□□ -1.68
HMGB1P12-201ENST00000438594 FAM193AP78312 1265 aa4.57□□□□□ -1.68
HMGB1P12-201ENST00000438594 SNW1Q13573 536 aaKnown RBP4.57□□□□□ -1.68
HMGB1P12-201ENST00000438594 NFE2Q16621 373 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P12-201ENST00000438594 BBS9Q3SYG4 887 aa4.57□□□□□ -1.68
HMGB1P12-201ENST00000438594 ARSHQ5FYA8 562 aa4.57□□□□□ -1.68
HMGB1P12-201ENST00000438594 NT5DC1Q5TFE4 455 aa4.57□□□□□ -1.68
HMGB1P12-201ENST00000438594 ADGRG2Q8IZP9 1017 aa4.57□□□□□ -1.68
HMGB1P12-201ENST00000438594 PDILTQ8N807 584 aa4.57□□□□□ -1.68
HMGB1P12-201ENST00000438594 LINC00116Q8NCU8 138 aa4.57□□□□□ -1.68
HMGB1P12-201ENST00000438594 FCRL2Q96LA5 508 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P12-201ENST00000438594 CDADC1Q9BWV3 514 aa4.57□□□□□ -1.68
HMGB1P12-201ENST00000438594 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P12-201ENST00000438594 SNTG2Q9NY99 539 aa4.57□□□□□ -1.68
HMGB1P12-201ENST00000438594 ANAPC4Q9UJX5 808 aa4.57□□□□□ -1.68
HMGB1P12-201ENST00000438594 MYRFQ9Y2G1 1151 aa4.57□□□□□ -1.68
HMGB1P12-201ENST00000438594 PCDHA5Q9Y5H7 936 aa4.57□□□□□ -1.68
HMGB1P12-201ENST00000438594 CLSPNQ9HAW4 1339 aa4.56□□□□□ -1.68
HMGB1P12-201ENST00000438594 A0A1B0GTL3 188 aa4.56□□□□□ -1.68
HMGB1P12-201ENST00000438594 FAM221BA6H8Z2 402 aa4.56□□□□□ -1.68
HMGB1P12-201ENST00000438594 FADS2P1A8MWK0 482 aa4.56□□□□□ -1.68
HMGB1P12-201ENST00000438594 FFAR3O14843 346 aa4.56□□□□□ -1.68
HMGB1P12-201ENST00000438594 TIMM44O43615 452 aa4.56□□□□□ -1.68
HMGB1P12-201ENST00000438594 ZRANB2O95218 330 aaKnown RBP eCLIP4.56□□□□□ -1.68
HMGB1P12-201ENST00000438594 PRAMEF1O95521 474 aa4.56□□□□□ -1.68
HMGB1P12-201ENST00000438594 PF4P02776 101 aa4.56□□□□□ -1.68
HMGB1P12-201ENST00000438594 KRT18P05783 430 aaKnown RBP4.56□□□□□ -1.68
HMGB1P12-201ENST00000438594 CTSHP09668 335 aa4.56□□□□□ -1.68
HMGB1P12-201ENST00000438594 RAG1P15918 1043 aa4.56□□□□□ -1.68
HMGB1P12-201ENST00000438594 CDKN1CP49918 316 aaPredicted RBP4.56□□□□□ -1.68
HMGB1P12-201ENST00000438594 ZNF200P98182 395 aaPredicted RBP4.56□□□□□ -1.68
HMGB1P12-201ENST00000438594 EXOSC10Q01780 885 aaKnown RBP4.56□□□□□ -1.68
HMGB1P12-201ENST00000438594 CAMK2GQ13555 558 aaPredicted RBP4.56□□□□□ -1.68
HMGB1P12-201ENST00000438594 MLECQ14165 292 aa4.56□□□□□ -1.68
HMGB1P12-201ENST00000438594 RASA3Q14644 834 aa4.56□□□□□ -1.68
HMGB1P12-201ENST00000438594 BRDTQ58F21 947 aaPredicted RBP4.56□□□□□ -1.68
HMGB1P12-201ENST00000438594 GATAD2BQ8WXI9 593 aa4.56□□□□□ -1.68
HMGB1P12-201ENST00000438594 RUNDC1Q96C34 613 aa4.56□□□□□ -1.68
HMGB1P12-201ENST00000438594 NEUROD6Q96NK8 337 aa4.56□□□□□ -1.68
HMGB1P12-201ENST00000438594 SIRPGQ9P1W8 387 aa4.56□□□□□ -1.68
HMGB1P12-201ENST00000438594 SUSD2Q9UGT4 822 aa4.56□□□□□ -1.68
HMGB1P12-201ENST00000438594 MINPP1Q9UNW1 487 aa4.56□□□□□ -1.68
HMGB1P12-201ENST00000438594 DNAJA2O60884 412 aa4.55□□□□□ -1.68
HMGB1P12-201ENST00000438594 LDHCP07864 332 aa4.55□□□□□ -1.68
HMGB1P12-201ENST00000438594 BRD3Q15059 726 aa4.55□□□□□ -1.68
HMGB1P12-201ENST00000438594 LRRC41Q15345 812 aa4.55□□□□□ -1.68
HMGB1P12-201ENST00000438594 TAF1CQ15572 869 aaPredicted RBP4.55□□□□□ -1.68
HMGB1P12-201ENST00000438594 ZKSCAN2Q63HK3 967 aa4.55□□□□□ -1.68
HMGB1P12-201ENST00000438594 ZC3H14Q6PJT7 736 aaKnown RBP4.55□□□□□ -1.68
HMGB1P12-201ENST00000438594 RPTNQ6XPR3 784 aa4.55□□□□□ -1.68
HMGB1P12-201ENST00000438594 GET4Q7L5D6 327 aaPredicted RBP4.55□□□□□ -1.68
HMGB1P12-201ENST00000438594 CCDC84Q86UT8 332 aaPredicted RBP4.55□□□□□ -1.68
HMGB1P12-201ENST00000438594 JAMLQ86YT9 394 aa4.55□□□□□ -1.68
HMGB1P12-201ENST00000438594 SH3TC2Q8TF17 1288 aa4.55□□□□□ -1.68
HMGB1P12-201ENST00000438594 VWCEQ96DN2 955 aa4.55□□□□□ -1.68
HMGB1P12-201ENST00000438594 SPATA25Q9BR10 227 aa4.55□□□□□ -1.68
HMGB1P12-201ENST00000438594 ZNF700Q9H0M5 742 aa4.55□□□□□ -1.68
HMGB1P12-201ENST00000438594 ZHX3Q9H4I2 956 aa4.55□□□□□ -1.68
HMGB1P12-201ENST00000438594 IMPACTQ9P2X3 320 aa4.55□□□□□ -1.68
HMGB1P12-201ENST00000438594 LZTS1Q9Y250 596 aa4.55□□□□□ -1.68
HMGB1P12-201ENST00000438594 POLR3KQ9Y2Y1 108 aaPredicted RBP4.55□□□□□ -1.68
HMGB1P12-201ENST00000438594 A0A1W2PQJ5 194 aa4.54□□□□□ -1.68
HMGB1P12-201ENST00000438594 ESYT3A0FGR9 886 aa4.54□□□□□ -1.68
HMGB1P12-201ENST00000438594 FAM221AA4D161 298 aa4.54□□□□□ -1.68
HMGB1P12-201ENST00000438594 RGS13O14921 159 aa4.54□□□□□ -1.68
HMGB1P12-201ENST00000438594 TBX3O15119 743 aa4.54□□□□□ -1.68
HMGB1P12-201ENST00000438594 TLR3O15455 904 aaKnown RBP4.54□□□□□ -1.68
HMGB1P12-201ENST00000438594 SUV39H1O43463 412 aa4.54□□□□□ -1.68
HMGB1P12-201ENST00000438594 AKAP8O43823 692 aaKnown RBP4.54□□□□□ -1.68
HMGB1P12-201ENST00000438594 MYL1P05976 194 aa4.54□□□□□ -1.68
HMGB1P12-201ENST00000438594 GBP2P32456 591 aaPredicted RBP4.54□□□□□ -1.68
HMGB1P12-201ENST00000438594 ZXDAP98168 799 aa4.54□□□□□ -1.68
HMGB1P12-201ENST00000438594 LMNB2Q03252 620 aa4.54□□□□□ -1.68
HMGB1P12-201ENST00000438594 FAM160A1Q05DH4 1040 aa4.54□□□□□ -1.68
HMGB1P12-201ENST00000438594 PAK2Q13177 524 aa4.54□□□□□ -1.68
HMGB1P12-201ENST00000438594 RAPGEF1Q13905 1077 aa4.54□□□□□ -1.68
HMGB1P12-201ENST00000438594 KCTD2Q14681 263 aa4.54□□□□□ -1.68
HMGB1P12-201ENST00000438594 PPP2R5AQ15172 486 aa4.54□□□□□ -1.68
HMGB1P12-201ENST00000438594 CCDC96Q2M329 555 aa4.54□□□□□ -1.68
HMGB1P12-201ENST00000438594 NBPF9Q3BBW0 867 aa4.54□□□□□ -1.68
HMGB1P12-201ENST00000438594 TMEM95Q3KNT9 176 aa4.54□□□□□ -1.68
HMGB1P12-201ENST00000438594 PLEKHN1Q494U1 663 aaPredicted RBP4.54□□□□□ -1.68
HMGB1P12-201ENST00000438594 SNAP47Q5SQN1 464 aa4.54□□□□□ -1.68
HMGB1P12-201ENST00000438594 C10orf62Q5T681 223 aaPredicted RBP4.54□□□□□ -1.68
HMGB1P12-201ENST00000438594 CCDC174Q6PII3 467 aa4.54□□□□□ -1.68
HMGB1P12-201ENST00000438594 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms