RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 KINO60870 393 aaKnown RBP13.66□□□□□ -0.22
RTN4-211ENST00000438462 LGR5O75473 907 aa13.66□□□□□ -0.22
RTN4-211ENST00000438462 PARNO95453 639 aaKnown RBP13.66□□□□□ -0.22
RTN4-211ENST00000438462 RB1P06400 928 aa13.66□□□□□ -0.22
RTN4-211ENST00000438462 SP9P0CG40 484 aa13.66□□□□□ -0.22
RTN4-211ENST00000438462 NRIP1P48552 1158 aa13.66□□□□□ -0.22
RTN4-211ENST00000438462 CALD1Q05682 793 aaKnown RBP13.66□□□□□ -0.22
RTN4-211ENST00000438462 CAMK1Q14012 370 aa13.66□□□□□ -0.22
RTN4-211ENST00000438462 SNRNP48Q6IEG0 339 aaKnown RBP13.66□□□□□ -0.22
RTN4-211ENST00000438462 UNQ6494/PRO21346Q6UXR6 183 aa13.66□□□□□ -0.22
RTN4-211ENST00000438462 TBC1D9Q6ZT07 1266 aa13.66□□□□□ -0.22
RTN4-211ENST00000438462 TSR2Q969E8 191 aaKnown RBP13.66□□□□□ -0.22
RTN4-211ENST00000438462 SERPINB13Q9UIV8 391 aa13.66□□□□□ -0.22
RTN4-211ENST00000438462 Q9Y3F1 56 aa13.66□□□□□ -0.22
RTN4-211ENST00000438462 RIPK3Q9Y572 518 aa13.66□□□□□ -0.22
RTN4-211ENST00000438462 WDFY3Q8IZQ1 3526 aa13.65□□□□□ -0.22
RTN4-211ENST00000438462 WDR46O15213 610 aaKnown RBP13.65□□□□□ -0.22
RTN4-211ENST00000438462 UPP2O95045 317 aa13.65□□□□□ -0.22
RTN4-211ENST00000438462 BAG3O95817 575 aa13.65□□□□□ -0.22
RTN4-211ENST00000438462 ASGR2P07307 311 aa13.65□□□□□ -0.22
RTN4-211ENST00000438462 PLCG2P16885 1265 aa13.65□□□□□ -0.22
RTN4-211ENST00000438462 PTGISQ16647 500 aa13.65□□□□□ -0.22
RTN4-211ENST00000438462 RBM23Q86U06 439 aaKnown RBP13.65□□□□□ -0.22
RTN4-211ENST00000438462 DHX38Q92620 1227 aaKnown RBP13.65□□□□□ -0.22
RTN4-211ENST00000438462 CTAGE1Q96RT6 745 aa13.65□□□□□ -0.22
RTN4-211ENST00000438462 TEX13BQ9BXU2 312 aa13.65□□□□□ -0.22
RTN4-211ENST00000438462 EHD4Q9H223 541 aa13.65□□□□□ -0.22
RTN4-211ENST00000438462 PDGFCQ9NRA1 345 aa13.65□□□□□ -0.22
RTN4-211ENST00000438462 NR2E1Q9Y466 385 aa13.65□□□□□ -0.22
RTN4-211ENST00000438462 CEP295Q9C0D2 2601 aa13.65□□□□□ -0.22
RTN4-211ENST00000438462 SLC30A4O14863 429 aa13.64□□□□□ -0.23
RTN4-211ENST00000438462 ALDH1L1O75891 902 aa13.64□□□□□ -0.23
RTN4-211ENST00000438462 LINC00271P0C7V0 271 aa13.64□□□□□ -0.23
RTN4-211ENST00000438462 SHMT1P34896 483 aa13.64□□□□□ -0.23
RTN4-211ENST00000438462 SLC4A3P48751 1232 aa13.64□□□□□ -0.23
RTN4-211ENST00000438462 RBM10P98175 930 aaKnown RBP13.64□□□□□ -0.23
RTN4-211ENST00000438462 PTPN11Q06124 597 aaPredicted RBP13.64□□□□□ -0.23
RTN4-211ENST00000438462 CCDC27Q2M243 656 aa13.64□□□□□ -0.23
RTN4-211ENST00000438462 PI16Q6UXB8 463 aa13.64□□□□□ -0.23
RTN4-211ENST00000438462 FBXO16Q8IX29 292 aaPredicted RBP13.64□□□□□ -0.23
RTN4-211ENST00000438462 GPHNQ9NQX3 736 aaPredicted RBP13.64□□□□□ -0.23
RTN4-211ENST00000438462 PPP1R9AQ9ULJ8 1098 aa13.64□□□□□ -0.23
RTN4-211ENST00000438462 DDX49Q9Y6V7 483 aaKnown RBP13.64□□□□□ -0.23
RTN4-211ENST00000438462 HELZ2Q9BYK8 2649 aaKnown RBP13.63□□□□□ -0.23
RTN4-211ENST00000438462 SRRM3A6NNA2 597 aaPredicted RBP13.63□□□□□ -0.23
RTN4-211ENST00000438462 C2CD4DB7Z1M9 353 aa13.63□□□□□ -0.23
RTN4-211ENST00000438462 MPHOSPH10O00566 681 aaKnown RBP13.63□□□□□ -0.23
RTN4-211ENST00000438462 CKBP12277 381 aa13.63□□□□□ -0.23
RTN4-211ENST00000438462 BMPR1AP36894 532 aa13.63□□□□□ -0.23
RTN4-211ENST00000438462 SOWAHCQ53LP3 525 aaPredicted RBP13.63□□□□□ -0.23
RTN4-211ENST00000438462 N4BP2L1Q5TBK1 243 aaPredicted RBP13.63□□□□□ -0.23
RTN4-211ENST00000438462 CLEC10AQ8IUN9 316 aa13.63□□□□□ -0.23
RTN4-211ENST00000438462 ANKRD35Q8N283 1001 aa13.63□□□□□ -0.23
RTN4-211ENST00000438462 FIBCD1Q8N539 461 aa13.63□□□□□ -0.23
RTN4-211ENST00000438462 KDF1Q8NAX2 398 aaPredicted RBP13.63□□□□□ -0.23
RTN4-211ENST00000438462 KIAA1671Q9BY89 1806 aa13.62□□□□□ -0.23
RTN4-211ENST00000438462 TGM1P22735 817 aa13.62□□□□□ -0.23
RTN4-211ENST00000438462 RFX5P48382 616 aaPredicted RBP13.62□□□□□ -0.23
RTN4-211ENST00000438462 CNTN2Q02246 1040 aa13.62□□□□□ -0.23
RTN4-211ENST00000438462 RBL2Q08999 1139 aa13.62□□□□□ -0.23
RTN4-211ENST00000438462 MBTPS1Q14703 1052 aa13.62□□□□□ -0.23
RTN4-211ENST00000438462 EEPD1Q7L9B9 569 aa13.62□□□□□ -0.23
RTN4-211ENST00000438462 ADGRA1Q86SQ6 560 aa13.62□□□□□ -0.23
RTN4-211ENST00000438462 NETO1Q8TDF5 533 aa13.62□□□□□ -0.23
RTN4-211ENST00000438462 SECISBP2LQ93073 1101 aaKnown RBP13.62□□□□□ -0.23
RTN4-211ENST00000438462 TOP1MTQ969P6 601 aa13.62□□□□□ -0.23
RTN4-211ENST00000438462 VCPKMTQ9H867 229 aa13.62□□□□□ -0.23
RTN4-211ENST00000438462 ERVK-5Q9HDB9 667 aa13.62□□□□□ -0.23
RTN4-211ENST00000438462 DNAJB1P25685 340 aa13.61□□□□□ -0.23
RTN4-211ENST00000438462 CPT1AP50416 773 aa13.61□□□□□ -0.23
RTN4-211ENST00000438462 CHMP4BP1P59074 171 aa13.61□□□□□ -0.23
RTN4-211ENST00000438462 IQSEC1Q6DN90 963 aa13.61□□□□□ -0.23
RTN4-211ENST00000438462 TAPT1Q6NXT6 567 aa13.61□□□□□ -0.23
RTN4-211ENST00000438462 SLC4A10Q6U841 1118 aa13.61□□□□□ -0.23
RTN4-211ENST00000438462 VN1R2Q8NFZ6 395 aa13.61□□□□□ -0.23
RTN4-211ENST00000438462 SRCIN1Q9C0H9 1055 aa13.61□□□□□ -0.23
RTN4-211ENST00000438462 PARD6AQ9NPB6 346 aa13.61□□□□□ -0.23
RTN4-211ENST00000438462 HMG20BQ9P0W2 317 aa13.61□□□□□ -0.23
RTN4-211ENST00000438462 CEP126Q9P2H0 1117 aa13.61□□□□□ -0.23
RTN4-211ENST00000438462 RWDD3Q9Y3V2 267 aa13.61□□□□□ -0.23
RTN4-211ENST00000438462 IGF2RP11717 2491 aa13.61□□□□□ -0.23
RTN4-211ENST00000438462 RBM25P49756 843 aaKnown RBP13.6□□□□□ -0.23
RTN4-211ENST00000438462 PPP4CP60510 307 aa13.6□□□□□ -0.23
RTN4-211ENST00000438462 GDF6Q6KF10 455 aaPredicted RBP13.6□□□□□ -0.23
RTN4-211ENST00000438462 NAA16Q6N069 864 aaPredicted RBP13.6□□□□□ -0.23
RTN4-211ENST00000438462 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.6□□□□□ -0.233e-7■□□□□ 8.1
RTN4-211ENST00000438462 SIX5Q8N196 739 aa13.6□□□□□ -0.23
RTN4-211ENST00000438462 DBF4BQ8NFT6 615 aa13.6□□□□□ -0.23
RTN4-211ENST00000438462 NEK1Q96PY6 1258 aa13.6□□□□□ -0.23
RTN4-211ENST00000438462 APOL5Q9BWW9 433 aa13.6□□□□□ -0.23
RTN4-211ENST00000438462 IFIH1Q9BYX4 1025 aaKnown RBP13.6□□□□□ -0.23
RTN4-211ENST00000438462 MYH8P13535 1937 aa13.59□□□□□ -0.23
RTN4-211ENST00000438462 TRAF7Q6Q0C0 670 aa13.59□□□□□ -0.23
RTN4-211ENST00000438462 S1PR5Q9H228 398 aa13.59□□□□□ -0.23
RTN4-211ENST00000438462 ARHGEF10LQ9HCE6 1279 aa13.59□□□□□ -0.23
RTN4-211ENST00000438462 LRP2BPQ9P2M1 347 aa13.59□□□□□ -0.23
RTN4-211ENST00000438462 CDH22Q9UJ99 828 aa13.59□□□□□ -0.23
RTN4-211ENST00000438462 PLAGL2Q9UPG8 496 aa13.59□□□□□ -0.23
RTN4-211ENST00000438462 SMG5Q9UPR3 1016 aaKnown RBP13.59□□□□□ -0.23
RTN4-211ENST00000438462 TMX2Q9Y320 296 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms