RNA–Protein interactions for RNA: ENST00000438254.1

CUBN-204, Transcript of cubilin, humanhuman

TSL 3

Gene CUBN, Length 599 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBN-204ENST00000438254 TXNRD2Q9NNW7 524 aa11.1□□□□□ -0.63
CUBN-204ENST00000438254 POLR3EQ9NVU0 708 aa11.1□□□□□ -0.63
CUBN-204ENST00000438254 TMEM260Q9NX78 707 aa11.1□□□□□ -0.63
CUBN-204ENST00000438254 RTEL1Q9NZ71 1219 aa11.1□□□□□ -0.63
CUBN-204ENST00000438254 RBPJLQ9UBG7 517 aa11.1□□□□□ -0.63
CUBN-204ENST00000438254 RCOR1Q9UKL0 485 aa11.1□□□□□ -0.63
CUBN-204ENST00000438254 CNPY2Q9Y2B0 182 aa11.1□□□□□ -0.63
CUBN-204ENST00000438254 IGF2BP3O00425 579 aaKnown RBP eCLIP11.09□□□□□ -0.63
CUBN-204ENST00000438254 NFIBO00712 420 aa11.09□□□□□ -0.63
CUBN-204ENST00000438254 PEX10O60683 326 aa11.09□□□□□ -0.63
CUBN-204ENST00000438254 YEATS4O95619 227 aa11.09□□□□□ -0.63
CUBN-204ENST00000438254 OSBPP22059 807 aa11.09□□□□□ -0.63
CUBN-204ENST00000438254 APLP1P51693 650 aa11.09□□□□□ -0.63
CUBN-204ENST00000438254 IRX3P78415 501 aaPredicted RBP11.09□□□□□ -0.63
CUBN-204ENST00000438254 AP3B2Q13367 1082 aa11.09□□□□□ -0.63
CUBN-204ENST00000438254 PTPAQ15257 358 aa11.09□□□□□ -0.63
CUBN-204ENST00000438254 TKFCQ3LXA3 575 aa11.09□□□□□ -0.63
CUBN-204ENST00000438254 FOXD4L6Q3SYB3 417 aaPredicted RBP11.09□□□□□ -0.63
CUBN-204ENST00000438254 USP17L6PQ6QN14 398 aa11.09□□□□□ -0.63
CUBN-204ENST00000438254 FOXD4L3Q6VB84 417 aaPredicted RBP11.09□□□□□ -0.63
CUBN-204ENST00000438254 PIK3AP1Q6ZUJ8 805 aa11.09□□□□□ -0.63
CUBN-204ENST00000438254 RIOX2Q8IUF8 465 aa11.09□□□□□ -0.63
CUBN-204ENST00000438254 CPXCR1Q8N123 301 aa11.09□□□□□ -0.63
CUBN-204ENST00000438254 GTF3C2Q8WUA4 911 aaPredicted RBP11.09□□□□□ -0.63
CUBN-204ENST00000438254 KCTD12Q96CX2 325 aaKnown RBP11.09□□□□□ -0.63
CUBN-204ENST00000438254 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.09□□□□□ -0.63
CUBN-204ENST00000438254 MAP3K20Q9NYL2 800 aaKnown RBP11.09□□□□□ -0.63
CUBN-204ENST00000438254 TFIP11Q9UBB9 837 aaKnown RBP11.09□□□□□ -0.63
CUBN-204ENST00000438254 BIN2Q9UBW5 565 aaPredicted RBP11.09□□□□□ -0.63
CUBN-204ENST00000438254 PNMA3Q9UL41 463 aa11.09□□□□□ -0.63
CUBN-204ENST00000438254 RABGAP1Q9Y3P9 1069 aa11.09□□□□□ -0.63
CUBN-204ENST00000438254 CLIC4Q9Y696 253 aa11.09□□□□□ -0.63
CUBN-204ENST00000438254 ELP1O95163 1332 aa11.09□□□□□ -0.63
CUBN-204ENST00000438254 FRMPD4Q14CM0 1322 aa11.09□□□□□ -0.63
CUBN-204ENST00000438254 CYP2C8P10632 490 aa11.08□□□□□ -0.64
CUBN-204ENST00000438254 ALAS1P13196 640 aa11.08□□□□□ -0.64
CUBN-204ENST00000438254 STAT3P40763 770 aa11.08□□□□□ -0.64
CUBN-204ENST00000438254 TM4SF4P48230 202 aa11.08□□□□□ -0.64
CUBN-204ENST00000438254 GNL2Q13823 731 aaKnown RBP11.08□□□□□ -0.64
CUBN-204ENST00000438254 NBR1Q14596 966 aa11.08□□□□□ -0.64
CUBN-204ENST00000438254 NONOQ15233 471 aaKnown RBP eCLIP11.08□□□□□ -0.64
CUBN-204ENST00000438254 NFKBIBQ15653 356 aa11.08□□□□□ -0.64
CUBN-204ENST00000438254 Q3C1V9 767 aa11.08□□□□□ -0.64
CUBN-204ENST00000438254 JAKMIP3Q5VZ66 844 aa11.08□□□□□ -0.64
CUBN-204ENST00000438254 ANO1Q5XXA6 986 aa11.08□□□□□ -0.64
CUBN-204ENST00000438254 MCTP2Q6DN12 878 aa11.08□□□□□ -0.64
CUBN-204ENST00000438254 SNRNP48Q6IEG0 339 aaKnown RBP11.08□□□□□ -0.64
CUBN-204ENST00000438254 C4orf32Q8N8J7 132 aa11.08□□□□□ -0.64
CUBN-204ENST00000438254 LINC00301Q8NCQ3 95 aa11.08□□□□□ -0.64
CUBN-204ENST00000438254 LEO1Q8WVC0 666 aaPredicted RBP11.08□□□□□ -0.64
CUBN-204ENST00000438254 ZNF396Q96N95 335 aaPredicted RBP11.08□□□□□ -0.64
CUBN-204ENST00000438254 TRERF1Q96PN7 1200 aa11.08□□□□□ -0.64
CUBN-204ENST00000438254 SCAND2PQ9GZW5 306 aaPredicted RBP11.08□□□□□ -0.64
CUBN-204ENST00000438254 SPATC1LQ9H0A9 340 aa11.08□□□□□ -0.64
CUBN-204ENST00000438254 RNF146Q9NTX7 359 aa11.08□□□□□ -0.64
CUBN-204ENST00000438254 LMBRD1Q9NUN5 540 aa11.08□□□□□ -0.64
CUBN-204ENST00000438254 COL20A1Q9P218 1284 aa11.08□□□□□ -0.64
CUBN-204ENST00000438254 MORF4L1Q9UBU8 362 aa11.08□□□□□ -0.64
CUBN-204ENST00000438254 CFAP45Q9UL16 551 aa11.08□□□□□ -0.64
CUBN-204ENST00000438254 ABT1Q9ULW3 272 aaKnown RBP11.08□□□□□ -0.64
CUBN-204ENST00000438254 PCDHB6Q9Y5E3 794 aa11.08□□□□□ -0.64
CUBN-204ENST00000438254 RPTORQ8N122 1335 aa11.08□□□□□ -0.64
CUBN-204ENST00000438254 LCTP09848 1927 aa11.07□□□□□ -0.64
CUBN-204ENST00000438254 THSD7BQ9C0I4 1608 aa11.07□□□□□ -0.64
CUBN-204ENST00000438254 CCDC194A0A1B0GVG4 234 aa11.07□□□□□ -0.64
CUBN-204ENST00000438254 GCOM1H8Y6P7 765 aaPredicted RBP11.07□□□□□ -0.64
CUBN-204ENST00000438254 FOSP01100 380 aaPredicted RBP11.07□□□□□ -0.64
CUBN-204ENST00000438254 POLR2MP0CAP2 368 aa11.07□□□□□ -0.64
CUBN-204ENST00000438254 SREBF1P36956 1147 aa11.07□□□□□ -0.64
CUBN-204ENST00000438254 INHBEP58166 350 aa11.07□□□□□ -0.64
CUBN-204ENST00000438254 SLC39A14Q15043 492 aa11.07□□□□□ -0.64
CUBN-204ENST00000438254 SF3A1Q15459 793 aaKnown RBP11.07□□□□□ -0.64
CUBN-204ENST00000438254 INF2Q27J81 1249 aa11.07□□□□□ -0.64
CUBN-204ENST00000438254 HS6ST3Q8IZP7 471 aa11.07□□□□□ -0.64
CUBN-204ENST00000438254 CHST13Q8NET6 341 aa11.07□□□□□ -0.64
CUBN-204ENST00000438254 TBCKQ8TEA7 893 aa11.07□□□□□ -0.64
CUBN-204ENST00000438254 PGBD1Q96JS3 809 aa11.07□□□□□ -0.64
CUBN-204ENST00000438254 MBOAT7Q96N66 472 aa11.07□□□□□ -0.64
CUBN-204ENST00000438254 ZIC5Q96T25 663 aa11.07□□□□□ -0.64
CUBN-204ENST00000438254 MOV10L1Q9BXT6 1211 aaKnown RBP11.07□□□□□ -0.64
CUBN-204ENST00000438254 ANO3Q9BYT9 981 aa11.07□□□□□ -0.64
CUBN-204ENST00000438254 R3HDMLQ9H3Y0 253 aa11.07□□□□□ -0.64
CUBN-204ENST00000438254 GDPD2Q9HCC8 539 aa11.07□□□□□ -0.64
CUBN-204ENST00000438254 MYH7BA7E2Y1 1941 aa11.06□□□□□ -0.64
CUBN-204ENST00000438254 FIBPO43427 364 aa11.06□□□□□ -0.64
CUBN-204ENST00000438254 CFBP00751 764 aa11.06□□□□□ -0.64
CUBN-204ENST00000438254 CYP3A4P08684 503 aa11.06□□□□□ -0.64
CUBN-204ENST00000438254 HOXA13P31271 388 aaPredicted RBP11.06□□□□□ -0.64
CUBN-204ENST00000438254 CIITAP33076 1130 aa11.06□□□□□ -0.64
CUBN-204ENST00000438254 GCLCP48506 637 aaPredicted RBP11.06□□□□□ -0.64
CUBN-204ENST00000438254 RPS6P62753 249 aaKnown RBP11.06□□□□□ -0.64
CUBN-204ENST00000438254 ERVK-9P63128 1117 aa11.06□□□□□ -0.64
CUBN-204ENST00000438254 ERVK-24P63145 666 aa11.06□□□□□ -0.64
CUBN-204ENST00000438254 ORC2Q13416 577 aaPredicted RBP11.06□□□□□ -0.64
CUBN-204ENST00000438254 TTC38Q5R3I4 469 aa11.06□□□□□ -0.64
CUBN-204ENST00000438254 CYP4F22Q6NT55 531 aa11.06□□□□□ -0.64
CUBN-204ENST00000438254 SLC30A10Q6XR72 485 aa11.06□□□□□ -0.64
CUBN-204ENST00000438254 NEK8Q86SG6 692 aa11.06□□□□□ -0.64
CUBN-204ENST00000438254 MCF2L2Q86YR7 1114 aa11.06□□□□□ -0.64
CUBN-204ENST00000438254 SHCBP1Q8NEM2 672 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms