RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 SAMD7Q7Z3H4 446 aa28.87■■■□□ 2.21
CPNE1-216ENST00000437340 GPC2Q8N158 579 aa28.87■■■□□ 2.21
CPNE1-216ENST00000437340 GIMAP8Q8ND71 665 aaPredicted RBP28.87■■■□□ 2.21
CPNE1-216ENST00000437340 NELFBQ8WX92 580 aa28.87■■■□□ 2.21
CPNE1-216ENST00000437340 MBOAT7Q96N66 472 aa28.87■■■□□ 2.21
CPNE1-216ENST00000437340 SH2D4AQ9H788 454 aa28.87■■■□□ 2.21
CPNE1-216ENST00000437340 ECE1P42892 770 aa28.86■■■□□ 2.21
CPNE1-216ENST00000437340 SPAG1Q07617 926 aa28.86■■■□□ 2.21
CPNE1-216ENST00000437340 TBX2Q13207 712 aaPredicted RBP28.86■■■□□ 2.21
CPNE1-216ENST00000437340 GRB10Q13322 594 aa28.86■■■□□ 2.21
CPNE1-216ENST00000437340 STIM1Q13586 685 aa28.86■■■□□ 2.21
CPNE1-216ENST00000437340 KRT79Q5XKE5 535 aa28.86■■■□□ 2.21
CPNE1-216ENST00000437340 HAS1Q92839 578 aa28.86■■■□□ 2.21
CPNE1-216ENST00000437340 PRR12Q9ULL5 1215 aa28.86■■■□□ 2.21
CPNE1-216ENST00000437340 GDAQ9Y2T3 454 aa28.86■■■□□ 2.21
CPNE1-216ENST00000437340 SOCS7O14512 581 aa28.85■■■□□ 2.21
CPNE1-216ENST00000437340 CAP2P40123 477 aa28.85■■■□□ 2.21
CPNE1-216ENST00000437340 PRCPP42785 496 aa28.85■■■□□ 2.21
CPNE1-216ENST00000437340 C9orf131Q5VYM1 1079 aa28.85■■■□□ 2.21
CPNE1-216ENST00000437340 CRYGNQ8WXF5 182 aa28.85■■■□□ 2.21
CPNE1-216ENST00000437340 CDK5RAP3Q96JB5 506 aa28.85■■■□□ 2.21
CPNE1-216ENST00000437340 SLC26A4O43511 780 aa28.85■■■□□ 2.21
CPNE1-216ENST00000437340 PLA2G6O60733 806 aa28.85■■■□□ 2.21
CPNE1-216ENST00000437340 PPP1R2P41236 205 aa28.85■■■□□ 2.21
CPNE1-216ENST00000437340 GPR162Q16538 588 aa28.85■■■□□ 2.21
CPNE1-216ENST00000437340 TBC1D10BQ4KMP7 808 aaPredicted RBP28.85■■■□□ 2.21
CPNE1-216ENST00000437340 SV2BQ7L1I2 683 aa28.85■■■□□ 2.21
CPNE1-216ENST00000437340 ACER1Q8TDN7 264 aa28.85■■■□□ 2.21
CPNE1-216ENST00000437340 MYH7BA7E2Y1 1941 aa28.85■■■□□ 2.21
CPNE1-216ENST00000437340 PNMA5Q96PV4 448 aa28.84■■■□□ 2.21
CPNE1-216ENST00000437340 LRRC27Q9C0I9 530 aa28.84■■■□□ 2.21
CPNE1-216ENST00000437340 VCPKMTQ9H867 229 aa28.84■■■□□ 2.21
CPNE1-216ENST00000437340 LRRC10BA6NIK2 292 aa28.83■■■□□ 2.21
CPNE1-216ENST00000437340 H7C1D1 291 aa28.83■■■□□ 2.21
CPNE1-216ENST00000437340 FILIP1LQ4L180 1135 aa28.83■■■□□ 2.21
CPNE1-216ENST00000437340 SPICE1Q8N0Z3 855 aa28.83■■■□□ 2.21
CPNE1-216ENST00000437340 SNX29Q8TEQ0 813 aa28.83■■■□□ 2.21
CPNE1-216ENST00000437340 KCNMB3Q9NPA1 279 aa28.83■■■□□ 2.21
CPNE1-216ENST00000437340 GPRC5DQ9NZD1 345 aa28.83■■■□□ 2.21
CPNE1-216ENST00000437340 ADD3Q9UEY8 706 aaKnown RBP28.83■■■□□ 2.21
CPNE1-216ENST00000437340 LIMA1Q9UHB6 759 aaKnown RBP28.83■■■□□ 2.21
CPNE1-216ENST00000437340 PCDHA12Q9UN75 941 aa28.83■■■□□ 2.21
CPNE1-216ENST00000437340 POTEMA6NI47 508 aa28.83■■■□□ 2.21
CPNE1-216ENST00000437340 MARCH6O60337 910 aa28.83■■■□□ 2.21
CPNE1-216ENST00000437340 KIF4BQ2VIQ3 1234 aa28.83■■■□□ 2.21
CPNE1-216ENST00000437340 TMEM119Q4V9L6 283 aa28.83■■■□□ 2.21
CPNE1-216ENST00000437340 CHURC1Q8WUH1 139 aa28.83■■■□□ 2.21
CPNE1-216ENST00000437340 TMX1Q9H3N1 280 aa28.83■■■□□ 2.21
CPNE1-216ENST00000437340 BLOC1S4Q9NUP1 217 aa28.83■■■□□ 2.21
CPNE1-216ENST00000437340 PIK3CDO00329 1044 aa28.82■■■□□ 2.2
CPNE1-216ENST00000437340 PSMA7O14818 248 aa28.82■■■□□ 2.2
CPNE1-216ENST00000437340 HOXA7P31268 230 aaPredicted RBP28.82■■■□□ 2.2
CPNE1-216ENST00000437340 TNFAIP1Q13829 316 aa28.82■■■□□ 2.2
CPNE1-216ENST00000437340 COBLL1Q53SF7 1204 aa28.82■■■□□ 2.2
CPNE1-216ENST00000437340 SLFN12Q8IYM2 578 aa28.82■■■□□ 2.2
CPNE1-216ENST00000437340 LARP4BQ92615 738 aaKnown RBP28.82■■■□□ 2.2
CPNE1-216ENST00000437340 DHTKD1Q96HY7 919 aaPredicted RBP28.82■■■□□ 2.2
CPNE1-216ENST00000437340 EXOC1Q9NV70 894 aa28.82■■■□□ 2.2
CPNE1-216ENST00000437340 SPDYE3A6NKU9 549 aa28.81■■■□□ 2.2
CPNE1-216ENST00000437340 ASNSP08243 561 aa28.81■■■□□ 2.2
CPNE1-216ENST00000437340 SNAP25P60880 206 aa28.81■■■□□ 2.2
CPNE1-216ENST00000437340 ASIC1P78348 528 aa28.81■■■□□ 2.2
CPNE1-216ENST00000437340 ARHGAP4P98171 946 aa28.81■■■□□ 2.2
CPNE1-216ENST00000437340 USH1GQ495M9 461 aa28.81■■■□□ 2.2
CPNE1-216ENST00000437340 KIAA1755Q5JYT7 1200 aa28.81■■■□□ 2.2
CPNE1-216ENST00000437340 CNNM4Q6P4Q7 775 aa28.81■■■□□ 2.2
CPNE1-216ENST00000437340 MIGA2Q7L4E1 593 aa28.81■■■□□ 2.2
CPNE1-216ENST00000437340 CDAN1Q8IWY9 1227 aa28.81■■■□□ 2.2
CPNE1-216ENST00000437340 CCAR2Q8N163 923 aaKnown RBP28.81■■■□□ 2.2
CPNE1-216ENST00000437340 ANKRD20A12PQ8NF67 263 aa28.81■■■□□ 2.2
CPNE1-216ENST00000437340 ASTN2O75129 1339 aaPredicted RBP28.81■■■□□ 2.2
CPNE1-216ENST00000437340 TBX3O15119 743 aa28.8■■■□□ 2.2
CPNE1-216ENST00000437340 DDNO94850 711 aaPredicted RBP28.8■■■□□ 2.2
CPNE1-216ENST00000437340 SREBF1P36956 1147 aa28.8■■■□□ 2.2
CPNE1-216ENST00000437340 HYIQ5T013 277 aa28.8■■■□□ 2.2
CPNE1-216ENST00000437340 FAM83BQ5T0W9 1011 aa28.8■■■□□ 2.2
CPNE1-216ENST00000437340 FAM160B2Q86V87 743 aa28.8■■■□□ 2.2
CPNE1-216ENST00000437340 KDM3AQ9Y4C1 1321 aa28.8■■■□□ 2.2
CPNE1-216ENST00000437340 PVALEFA0A1B0GWK0 134 aa28.8■■■□□ 2.2
CPNE1-216ENST00000437340 PDE4DQ08499 809 aa28.8■■■□□ 2.2
CPNE1-216ENST00000437340 Q4G0T1 1027 aa28.8■■■□□ 2.2
CPNE1-216ENST00000437340 RAD54LQ92698 747 aa28.8■■■□□ 2.2
CPNE1-216ENST00000437340 SCAF8Q9UPN6 1271 aaKnown RBP28.8■■■□□ 2.2
CPNE1-216ENST00000437340 PBX1P40424 430 aa28.79■■■□□ 2.2
CPNE1-216ENST00000437340 NT5C3AQ9H0P0 336 aa28.79■■■□□ 2.2
CPNE1-216ENST00000437340 RANBP17Q9H2T7 1088 aaKnown RBP28.79■■■□□ 2.2
CPNE1-216ENST00000437340 GINM1Q9NU53 330 aa28.79■■■□□ 2.2
CPNE1-216ENST00000437340 CIITAP33076 1130 aa28.78■■■□□ 2.2
CPNE1-216ENST00000437340 TRPM4Q8TD43 1214 aa28.78■■■□□ 2.2
CPNE1-216ENST00000437340 C16orf45Q96MC5 204 aaPredicted RBP28.78■■■□□ 2.2
CPNE1-216ENST00000437340 MAPK8IP1Q9UQF2 711 aa28.78■■■□□ 2.2
CPNE1-216ENST00000437340 OPLAHO14841 1288 aa28.78■■■□□ 2.2
CPNE1-216ENST00000437340 EPS15P42566 896 aa28.78■■■□□ 2.2
CPNE1-216ENST00000437340 RASA3Q14644 834 aa28.78■■■□□ 2.2
CPNE1-216ENST00000437340 TCP11X2Q5H9J9 407 aa28.78■■■□□ 2.2
CPNE1-216ENST00000437340 NOC3LQ8WTT2 800 aaKnown RBP28.78■■■□□ 2.2
CPNE1-216ENST00000437340 P2RX7Q99572 595 aaKnown RBP28.78■■■□□ 2.2
CPNE1-216ENST00000437340 MCM6Q14566 821 aa28.77■■■□□ 2.2
CPNE1-216ENST00000437340 KRT31Q15323 416 aa28.77■■■□□ 2.2
CPNE1-216ENST00000437340 UNC13DQ70J99 1090 aa28.77■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms