RNA–Protein interactions for RNA: ENST00000437201.5

SBDSP1-203, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 1 (best)

Gene SBDSP1, Length 839 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-203ENST00000437201 MTMR10Q9NXD2 777 aa20.38■□□□□ 0.85
SBDSP1-203ENST00000437201 CFBP00751 764 aa20.37■□□□□ 0.85
SBDSP1-203ENST00000437201 SUPT20HL2P0C7V6 817 aa20.37■□□□□ 0.85
SBDSP1-203ENST00000437201 ZNF697Q5TEC3 545 aa20.37■□□□□ 0.85
SBDSP1-203ENST00000437201 TBC1D5Q92609 795 aa20.37■□□□□ 0.85
SBDSP1-203ENST00000437201 MTG1Q9BT17 334 aaPredicted RBP20.37■□□□□ 0.85
SBDSP1-203ENST00000437201 RIOX1Q9H6W3 641 aa20.37■□□□□ 0.85
SBDSP1-203ENST00000437201 A6NJR5 290 aa20.36■□□□□ 0.85
SBDSP1-203ENST00000437201 EIF3JO75822 258 aaKnown RBP20.36■□□□□ 0.85
SBDSP1-203ENST00000437201 MYL3P08590 195 aa20.36■□□□□ 0.85
SBDSP1-203ENST00000437201 PTGS1P23219 599 aa20.36■□□□□ 0.85
SBDSP1-203ENST00000437201 KIF5BP33176 963 aa20.36■□□□□ 0.85
SBDSP1-203ENST00000437201 HSD17B4P51659 736 aa20.36■□□□□ 0.85
SBDSP1-203ENST00000437201 PURAQ00577 322 aaKnown RBP20.36■□□□□ 0.85
SBDSP1-203ENST00000437201 GHRHRQ02643 423 aa20.36■□□□□ 0.85
SBDSP1-203ENST00000437201 TROAPQ12815 778 aa20.36■□□□□ 0.85
SBDSP1-203ENST00000437201 BMP2KLQ5H9B9 411 aa20.36■□□□□ 0.85
SBDSP1-203ENST00000437201 STOX1Q6ZVD7 989 aa20.36■□□□□ 0.85
SBDSP1-203ENST00000437201 CHST3Q7LGC8 479 aa20.36■□□□□ 0.85
SBDSP1-203ENST00000437201 MB21D2Q8IYB1 491 aaPredicted RBP20.36■□□□□ 0.85
SBDSP1-203ENST00000437201 IGDCC4Q8TDY8 1250 aa20.36■□□□□ 0.85
SBDSP1-203ENST00000437201 MAP3K14Q99558 947 aa20.36■□□□□ 0.85
SBDSP1-203ENST00000437201 ESYT1Q9BSJ8 1104 aa20.36■□□□□ 0.85
SBDSP1-203ENST00000437201 HIPK3Q9H422 1215 aa20.36■□□□□ 0.85
SBDSP1-203ENST00000437201 STXBP5LQ9Y2K9 1186 aa20.36■□□□□ 0.85
SBDSP1-203ENST00000437201 GRIN2DO15399 1336 aa20.35■□□□□ 0.85
SBDSP1-203ENST00000437201 PNMA6FA0A0J9YX94 578 aa20.35■□□□□ 0.85
SBDSP1-203ENST00000437201 MCM5P33992 734 aa20.35■□□□□ 0.85
SBDSP1-203ENST00000437201 EPHB4P54760 987 aa20.35■□□□□ 0.85
SBDSP1-203ENST00000437201 PSMC6P62333 389 aa20.35■□□□□ 0.85
SBDSP1-203ENST00000437201 SEPT14Q6ZU15 432 aa20.35■□□□□ 0.85
SBDSP1-203ENST00000437201 HOMER1Q86YM7 354 aa20.35■□□□□ 0.85
SBDSP1-203ENST00000437201 CTCFLQ8NI51 663 aaPredicted RBP20.35■□□□□ 0.85
SBDSP1-203ENST00000437201 PPP1R12CQ9BZL4 782 aa20.35■□□□□ 0.85
SBDSP1-203ENST00000437201 COL20A1Q9P218 1284 aa20.35■□□□□ 0.85
SBDSP1-203ENST00000437201 TAF6LQ9Y6J9 622 aa20.35■□□□□ 0.85
SBDSP1-203ENST00000437201 DDAH1O94760 285 aa20.34■□□□□ 0.85
SBDSP1-203ENST00000437201 NR3C2P08235 984 aa20.34■□□□□ 0.85
SBDSP1-203ENST00000437201 CCDC62Q6P9F0 684 aa20.34■□□□□ 0.85
SBDSP1-203ENST00000437201 PSRC1Q6PGN9 363 aaPredicted RBP20.34■□□□□ 0.85
SBDSP1-203ENST00000437201 TMEM87BQ96K49 555 aa20.34■□□□□ 0.85
SBDSP1-203ENST00000437201 PIGSQ96S52 555 aa20.34■□□□□ 0.85
SBDSP1-203ENST00000437201 LZTS2Q9BRK4 669 aa20.34■□□□□ 0.85
SBDSP1-203ENST00000437201 LSG1Q9H089 658 aaKnown RBP20.34■□□□□ 0.85
SBDSP1-203ENST00000437201 ALDH8A1Q9H2A2 487 aaPredicted RBP20.34■□□□□ 0.85
SBDSP1-203ENST00000437201 PXMP2Q9NR77 195 aa20.34■□□□□ 0.85
SBDSP1-203ENST00000437201 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.33■□□□□ 0.85
SBDSP1-203ENST00000437201 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.33■□□□□ 0.85
SBDSP1-203ENST00000437201 GCOM1H8Y6P7 765 aaPredicted RBP20.33■□□□□ 0.85
SBDSP1-203ENST00000437201 B4GALT4O60513 344 aa20.33■□□□□ 0.85
SBDSP1-203ENST00000437201 GH1P01241 217 aa20.33■□□□□ 0.85
SBDSP1-203ENST00000437201 POLR2MP0CAP2 368 aa20.33■□□□□ 0.85
SBDSP1-203ENST00000437201 CSF2RAP15509 400 aa20.33■□□□□ 0.85
SBDSP1-203ENST00000437201 EIF2AK2P19525 551 aaKnown RBP20.33■□□□□ 0.85
SBDSP1-203ENST00000437201 GNAQP50148 359 aa20.33■□□□□ 0.85
SBDSP1-203ENST00000437201 ANTXR2P58335 489 aa20.33■□□□□ 0.85
SBDSP1-203ENST00000437201 RNF20Q5VTR2 975 aa20.33■□□□□ 0.85
SBDSP1-203ENST00000437201 KCNV1Q6PIU1 500 aa20.33■□□□□ 0.85
SBDSP1-203ENST00000437201 NFXL1Q6ZNB6 911 aa20.33■□□□□ 0.85
SBDSP1-203ENST00000437201 TRPV6Q9H1D0 765 aa20.33■□□□□ 0.85
SBDSP1-203ENST00000437201 MTIF3Q9H2K0 278 aaKnown RBP20.33■□□□□ 0.85
SBDSP1-203ENST00000437201 SENP2Q9HC62 589 aa20.33■□□□□ 0.85
SBDSP1-203ENST00000437201 ANO2Q9NQ90 1003 aa20.33■□□□□ 0.85
SBDSP1-203ENST00000437201 TMEM265A0A087WTH1 108 aa20.32■□□□□ 0.84
SBDSP1-203ENST00000437201 CCDC69A6NI79 296 aa20.32■□□□□ 0.84
SBDSP1-203ENST00000437201 SLC27A2O14975 620 aa20.32■□□□□ 0.84
SBDSP1-203ENST00000437201 PRC1O43663 620 aa20.32■□□□□ 0.84
SBDSP1-203ENST00000437201 PPP1R11O60927 126 aaPredicted RBP20.32■□□□□ 0.84
SBDSP1-203ENST00000437201 SMARCA1P28370 1054 aa20.32■□□□□ 0.84
SBDSP1-203ENST00000437201 CYP2C18P33260 490 aa20.32■□□□□ 0.84
SBDSP1-203ENST00000437201 PTPN11Q06124 597 aaPredicted RBP20.32■□□□□ 0.84
SBDSP1-203ENST00000437201 NFRKBQ6P4R8 1299 aa20.32■□□□□ 0.84
SBDSP1-203ENST00000437201 ZNF654Q8IZM8 581 aa20.32■□□□□ 0.84
SBDSP1-203ENST00000437201 COPS5Q92905 334 aa20.32■□□□□ 0.84
SBDSP1-203ENST00000437201 LY9Q9HBG7 655 aa20.32■□□□□ 0.84
SBDSP1-203ENST00000437201 IL23AQ9NPF7 189 aa20.32■□□□□ 0.84
SBDSP1-203ENST00000437201 LAMA2P24043 3122 aaKnown RBP20.32■□□□□ 0.84
SBDSP1-203ENST00000437201 OPLAHO14841 1288 aa20.31■□□□□ 0.84
SBDSP1-203ENST00000437201 ARIH2O95376 493 aa20.31■□□□□ 0.84
SBDSP1-203ENST00000437201 CALM1P0DP23 149 aa20.31■□□□□ 0.84
SBDSP1-203ENST00000437201 CALM2P0DP24 149 aa20.31■□□□□ 0.84
SBDSP1-203ENST00000437201 CALM3P0DP25 149 aa20.31■□□□□ 0.84
SBDSP1-203ENST00000437201 NECTIN1Q15223 517 aa20.31■□□□□ 0.84
SBDSP1-203ENST00000437201 LY6KQ17RY6 165 aa20.31■□□□□ 0.84
SBDSP1-203ENST00000437201 TMEM240Q5SV17 173 aa20.31■□□□□ 0.84
SBDSP1-203ENST00000437201 CREB3L3Q68CJ9 461 aa20.31■□□□□ 0.84
SBDSP1-203ENST00000437201 RPUSD2Q8IZ73 545 aaKnown RBP20.31■□□□□ 0.84
SBDSP1-203ENST00000437201 RRP36Q96EU6 259 aaKnown RBP20.31■□□□□ 0.84
SBDSP1-203ENST00000437201 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.31■□□□□ 0.84
SBDSP1-203ENST00000437201 NOC4LQ9BVI4 516 aaKnown RBP20.31■□□□□ 0.84
SBDSP1-203ENST00000437201 MRVI1Q9Y6F6 885 aa20.31■□□□□ 0.84
SBDSP1-203ENST00000437201 MYH6P13533 1939 aa20.3■□□□□ 0.84
SBDSP1-203ENST00000437201 CYTH3O43739 400 aa20.3■□□□□ 0.84
SBDSP1-203ENST00000437201 CASTP20810 708 aaKnown RBP20.3■□□□□ 0.84
SBDSP1-203ENST00000437201 LIFRP42702 1097 aa20.3■□□□□ 0.84
SBDSP1-203ENST00000437201 LAMC2Q13753 1193 aa20.3■□□□□ 0.84
SBDSP1-203ENST00000437201 NBPF20Q3BBV1 942 aa20.3■□□□□ 0.84
SBDSP1-203ENST00000437201 FAM47CQ5HY64 1035 aa20.3■□□□□ 0.84
SBDSP1-203ENST00000437201 AFG1LQ8WV93 481 aa20.3■□□□□ 0.84
SBDSP1-203ENST00000437201 EMID1Q96A84 441 aaPredicted RBP20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms