RNA–Protein interactions for RNA: ENST00000435201.5

LIMK1-203, Transcript of LIM domain kinase 1, humanhuman

TSL 1 (best)

Gene LIMK1, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-203ENST00000435201 STK4Q13043 487 aa18.71■□□□□ 0.59
LIMK1-203ENST00000435201 AP3B2Q13367 1082 aa18.71■□□□□ 0.59
LIMK1-203ENST00000435201 MB21D1Q8N884 522 aa18.71■□□□□ 0.59
LIMK1-203ENST00000435201 DUSP9Q99956 384 aaKnown RBP18.71■□□□□ 0.59
LIMK1-203ENST00000435201 TDRD3Q9H7E2 651 aaKnown RBP18.71■□□□□ 0.59
LIMK1-203ENST00000435201 SYNPO2Q9UMS6 1093 aa18.71■□□□□ 0.59
LIMK1-203ENST00000435201 ADGRG1Q9Y653 693 aa18.71■□□□□ 0.59
LIMK1-203ENST00000435201 KDM3AQ9Y4C1 1321 aa18.7■□□□□ 0.58
LIMK1-203ENST00000435201 MARCH6O60337 910 aa18.7■□□□□ 0.58
LIMK1-203ENST00000435201 USP11P51784 963 aa18.7■□□□□ 0.58
LIMK1-203ENST00000435201 GNG11P61952 73 aa18.7■□□□□ 0.58
LIMK1-203ENST00000435201 RAD9BQ6WBX8 426 aa18.7■□□□□ 0.58
LIMK1-203ENST00000435201 SIAH1Q8IUQ4 282 aa18.7■□□□□ 0.58
LIMK1-203ENST00000435201 DESI2Q9BSY9 194 aa18.7■□□□□ 0.58
LIMK1-203ENST00000435201 F5H6K3 240 aa18.69■□□□□ 0.58
LIMK1-203ENST00000435201 CASQ1P31415 396 aa18.69■□□□□ 0.58
LIMK1-203ENST00000435201 DNM2P50570 870 aa18.69■□□□□ 0.58
LIMK1-203ENST00000435201 KLRC3Q07444 240 aa18.69■□□□□ 0.58
LIMK1-203ENST00000435201 MCM6Q14566 821 aa18.69■□□□□ 0.58
LIMK1-203ENST00000435201 MTF1Q14872 753 aa18.69■□□□□ 0.58
LIMK1-203ENST00000435201 SHROOM1Q2M3G4 852 aaPredicted RBP18.69■□□□□ 0.58
LIMK1-203ENST00000435201 RBM26Q5T8P6 1007 aaKnown RBP18.69■□□□□ 0.58
LIMK1-203ENST00000435201 MOXD1Q6UVY6 613 aa18.69■□□□□ 0.58
LIMK1-203ENST00000435201 CYP26C1Q6V0L0 522 aa18.69■□□□□ 0.58
LIMK1-203ENST00000435201 ZNF507Q8TCN5 953 aa18.69■□□□□ 0.58
LIMK1-203ENST00000435201 HAS1Q92839 578 aa18.69■□□□□ 0.58
LIMK1-203ENST00000435201 AMNQ9BXJ7 453 aa18.69■□□□□ 0.58
LIMK1-203ENST00000435201 MYMKA6NI61 221 aa18.69■□□□□ 0.58
LIMK1-203ENST00000435201 GDF11O95390 407 aa18.69■□□□□ 0.58
LIMK1-203ENST00000435201 FCER1AP12319 257 aa18.69■□□□□ 0.58
LIMK1-203ENST00000435201 NAA30Q147X3 362 aaPredicted RBP18.69■□□□□ 0.58
LIMK1-203ENST00000435201 KIAA0895Q8NCT3 520 aa18.69■□□□□ 0.58
LIMK1-203ENST00000435201 ANO3Q9BYT9 981 aa18.69■□□□□ 0.58
LIMK1-203ENST00000435201 NT5C3AQ9H0P0 336 aa18.69■□□□□ 0.58
LIMK1-203ENST00000435201 TMOD2Q9NZR1 351 aa18.69■□□□□ 0.58
LIMK1-203ENST00000435201 PCDHA12Q9UN75 941 aa18.69■□□□□ 0.58
LIMK1-203ENST00000435201 CYP3A7-CYP3A51PA0A087WV96 503 aa18.68■□□□□ 0.58
LIMK1-203ENST00000435201 YDJCA8MPS7 323 aa18.68■□□□□ 0.58
LIMK1-203ENST00000435201 CYP3A7P24462 503 aa18.68■□□□□ 0.58
LIMK1-203ENST00000435201 PSMD2Q13200 908 aa18.68■□□□□ 0.58
LIMK1-203ENST00000435201 HYIQ5T013 277 aa18.68■□□□□ 0.58
LIMK1-203ENST00000435201 ANKRD40Q6AI12 368 aa18.68■□□□□ 0.58
LIMK1-203ENST00000435201 PRMT6Q96LA8 375 aaPredicted RBP18.68■□□□□ 0.58
LIMK1-203ENST00000435201 MBOAT7Q96N66 472 aa18.68■□□□□ 0.58
LIMK1-203ENST00000435201 TUBGCP2Q9BSJ2 902 aa18.68■□□□□ 0.58
LIMK1-203ENST00000435201 MRPL44Q9H9J2 332 aaKnown RBP18.68■□□□□ 0.58
LIMK1-203ENST00000435201 HERC5Q9UII4 1024 aaKnown RBP18.68■□□□□ 0.58
LIMK1-203ENST00000435201 USP17L15C9J2P7 530 aa18.67■□□□□ 0.58
LIMK1-203ENST00000435201 USP17L13C9JLJ4 530 aa18.67■□□□□ 0.58
LIMK1-203ENST00000435201 USP17L11C9JVI0 530 aa18.67■□□□□ 0.58
LIMK1-203ENST00000435201 USP17L18D6R9N7 530 aa18.67■□□□□ 0.58
LIMK1-203ENST00000435201 USP17L22D6RA61 530 aa18.67■□□□□ 0.58
LIMK1-203ENST00000435201 USP17L17D6RBQ6 530 aa18.67■□□□□ 0.58
LIMK1-203ENST00000435201 USP17L19D6RCP7 530 aa18.67■□□□□ 0.58
LIMK1-203ENST00000435201 USP17L20D6RJB6 530 aa18.67■□□□□ 0.58
LIMK1-203ENST00000435201 URI1O94763 535 aaPredicted RBP18.67■□□□□ 0.58
LIMK1-203ENST00000435201 NDUFB10O96000 172 aa18.67■□□□□ 0.58
LIMK1-203ENST00000435201 KRT9P35527 623 aa18.67■□□□□ 0.58
LIMK1-203ENST00000435201 USP17L24Q0WX57 530 aa18.67■□□□□ 0.58
LIMK1-203ENST00000435201 CENPPQ6IPU0 288 aa18.67■□□□□ 0.58
LIMK1-203ENST00000435201 USP17L6PQ6QN14 398 aa18.67■□□□□ 0.58
LIMK1-203ENST00000435201 CNOT6LQ96LI5 555 aaKnown RBP18.67■□□□□ 0.58
LIMK1-203ENST00000435201 CSRNP1Q96S65 589 aa18.67■□□□□ 0.58
LIMK1-203ENST00000435201 FANCGO15287 622 aa18.67■□□□□ 0.58
LIMK1-203ENST00000435201 PRKCSHP14314 528 aaPredicted RBP18.67■□□□□ 0.58
LIMK1-203ENST00000435201 EZH2Q15910 746 aaKnown RBP18.67■□□□□ 0.58
LIMK1-203ENST00000435201 SYDE2Q5VT97 1194 aa18.67■□□□□ 0.58
LIMK1-203ENST00000435201 GUF1Q8N442 669 aaKnown RBP18.67■□□□□ 0.58
LIMK1-203ENST00000435201 CAMKK2Q96RR4 588 aa18.67■□□□□ 0.58
LIMK1-203ENST00000435201 NUDT12Q9BQG2 462 aa18.67■□□□□ 0.58
LIMK1-203ENST00000435201 NUP58Q9BVL2 599 aa18.67■□□□□ 0.58
LIMK1-203ENST00000435201 KCNMB3Q9NPA1 279 aa18.67■□□□□ 0.58
LIMK1-203ENST00000435201 PES1O00541 588 aaKnown RBP18.66■□□□□ 0.58
LIMK1-203ENST00000435201 C21orf2O43822 256 aa18.66■□□□□ 0.58
LIMK1-203ENST00000435201 FGFR1OPO95684 399 aaKnown RBP18.66■□□□□ 0.58
LIMK1-203ENST00000435201 GH2P01242 217 aa18.66■□□□□ 0.58
LIMK1-203ENST00000435201 BMP3P12645 472 aa18.66■□□□□ 0.58
LIMK1-203ENST00000435201 RSBN1LQ6PCB5 846 aaPredicted RBP18.66■□□□□ 0.58
LIMK1-203ENST00000435201 FOXR2Q6PJQ5 311 aa18.66■□□□□ 0.58
LIMK1-203ENST00000435201 BTNL9Q6UXG8 535 aa18.66■□□□□ 0.58
LIMK1-203ENST00000435201 FBXO11Q86XK2 927 aa18.66■□□□□ 0.58
LIMK1-203ENST00000435201 SLFN12Q8IYM2 578 aa18.66■□□□□ 0.58
LIMK1-203ENST00000435201 RETREG2Q8NC44 543 aa18.66■□□□□ 0.58
LIMK1-203ENST00000435201 ZNF397Q8NF99 534 aaPredicted RBP18.66■□□□□ 0.58
LIMK1-203ENST00000435201 WDR24Q96S15 920 aa18.66■□□□□ 0.58
LIMK1-203ENST00000435201 SLC39A2Q9NP94 309 aa18.66■□□□□ 0.58
LIMK1-203ENST00000435201 MEIS2O14770 477 aa18.65■□□□□ 0.58
LIMK1-203ENST00000435201 FOSP01100 380 aaPredicted RBP18.65■□□□□ 0.58
LIMK1-203ENST00000435201 ERVK-24P63145 666 aa18.65■□□□□ 0.58
LIMK1-203ENST00000435201 ELF2Q15723 593 aa18.65■□□□□ 0.58
LIMK1-203ENST00000435201 DYMQ7RTS9 669 aa18.65■□□□□ 0.58
LIMK1-203ENST00000435201 RTKN2Q8IZC4 609 aa18.65■□□□□ 0.58
LIMK1-203ENST00000435201 OR8K1Q8NGG5 319 aa18.65■□□□□ 0.58
LIMK1-203ENST00000435201 KIFC2Q96AC6 838 aa18.65■□□□□ 0.58
LIMK1-203ENST00000435201 DNAJC7Q99615 494 aa18.65■□□□□ 0.58
LIMK1-203ENST00000435201 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.65■□□□□ 0.58
LIMK1-203ENST00000435201 HDAC9Q9UKV0 1011 aa18.65■□□□□ 0.58
LIMK1-203ENST00000435201 CAPN11Q9UMQ6 739 aa18.65■□□□□ 0.58
LIMK1-203ENST00000435201 LUC7L2Q9Y383 392 aaKnown RBP18.65■□□□□ 0.58
LIMK1-203ENST00000435201 V9GYY5 206 aaPredicted RBP18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms