RNA–Protein interactions for RNA: ENST00000435145.6

HLA-DQB2-231, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 2,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-231ENST00000435145 CTAGE6Q86UF2 777 aa17.94■□□□□ 0.46
HLA-DQB2-231ENST00000435145 CTAGE4Q8IX94 777 aa17.94■□□□□ 0.46
HLA-DQB2-231ENST00000435145 LRRC47Q8N1G4 583 aaKnown RBP17.94■□□□□ 0.46
HLA-DQB2-231ENST00000435145 LARP4BQ92615 738 aaKnown RBP17.94■□□□□ 0.46
HLA-DQB2-231ENST00000435145 EIF3CQ99613 913 aaKnown RBP17.94■□□□□ 0.46
HLA-DQB2-231ENST00000435145 DDX4Q9NQI0 724 aaKnown RBP17.94■□□□□ 0.46
HLA-DQB2-231ENST00000435145 SWAP70Q9UH65 585 aa17.94■□□□□ 0.46
HLA-DQB2-231ENST00000435145 GREB1LQ9C091 1923 aaPredicted RBP17.94■□□□□ 0.46
HLA-DQB2-231ENST00000435145 PNMA6FA0A0J9YX94 578 aa17.94■□□□□ 0.46
HLA-DQB2-231ENST00000435145 C6orf229H3BNL8 230 aa17.94■□□□□ 0.46
HLA-DQB2-231ENST00000435145 TTLL1O95922 423 aa17.94■□□□□ 0.46
HLA-DQB2-231ENST00000435145 TRIM21P19474 475 aaKnown RBP17.94■□□□□ 0.46
HLA-DQB2-231ENST00000435145 MTIF2P46199 727 aaKnown RBP17.94■□□□□ 0.46
HLA-DQB2-231ENST00000435145 KLK7P49862 253 aa17.94■□□□□ 0.46
HLA-DQB2-231ENST00000435145 MCM6Q14566 821 aa17.94■□□□□ 0.46
HLA-DQB2-231ENST00000435145 TMEM266Q2M3C6 531 aa17.94■□□□□ 0.46
HLA-DQB2-231ENST00000435145 PAPD7Q5XG87 772 aaKnown RBP17.94■□□□□ 0.46
HLA-DQB2-231ENST00000435145 DPP8Q6V1X1 898 aaPredicted RBP17.94■□□□□ 0.46
HLA-DQB2-231ENST00000435145 GUF1Q8N442 669 aaKnown RBP17.94■□□□□ 0.46
HLA-DQB2-231ENST00000435145 PURBQ96QR8 312 aaKnown RBP17.94■□□□□ 0.46
HLA-DQB2-231ENST00000435145 NOC4LQ9BVI4 516 aaKnown RBP17.94■□□□□ 0.46
HLA-DQB2-231ENST00000435145 JMJD4Q9H9V9 463 aa17.94■□□□□ 0.46
HLA-DQB2-231ENST00000435145 GUCA1BQ9UMX6 200 aa17.94■□□□□ 0.46
HLA-DQB2-231ENST00000435145 PPP1R11O60927 126 aaPredicted RBP17.93■□□□□ 0.46
HLA-DQB2-231ENST00000435145 TUBBP07437 444 aa17.93■□□□□ 0.46
HLA-DQB2-231ENST00000435145 CYLC1P35663 651 aaPredicted RBP17.93■□□□□ 0.46
HLA-DQB2-231ENST00000435145 SMC1AQ14683 1233 aaKnown RBP17.93■□□□□ 0.46
HLA-DQB2-231ENST00000435145 CERS5Q8N5B7 392 aa17.93■□□□□ 0.46
HLA-DQB2-231ENST00000435145 EHBP1Q8NDI1 1231 aa17.93■□□□□ 0.46
HLA-DQB2-231ENST00000435145 RAD54LQ92698 747 aa17.93■□□□□ 0.46
HLA-DQB2-231ENST00000435145 HPS3Q969F9 1004 aa17.93■□□□□ 0.46
HLA-DQB2-231ENST00000435145 MTMR8Q96EF0 704 aa17.93■□□□□ 0.46
HLA-DQB2-231ENST00000435145 RAB34Q9BZG1 259 aa17.93■□□□□ 0.46
HLA-DQB2-231ENST00000435145 ZNHIT6Q9NWK9 470 aaKnown RBP17.93■□□□□ 0.46
HLA-DQB2-231ENST00000435145 UBAP1LF5GYI3 381 aa17.93■□□□□ 0.46
HLA-DQB2-231ENST00000435145 NKRFO15226 690 aaKnown RBP eCLIP17.93■□□□□ 0.46
HLA-DQB2-231ENST00000435145 NHEJ1Q9H9Q4 299 aaPredicted RBP17.93■□□□□ 0.46
HLA-DQB2-231ENST00000435145 SLC39A2Q9NP94 309 aa17.93■□□□□ 0.46
HLA-DQB2-231ENST00000435145 SERPINB13Q9UIV8 391 aa17.93■□□□□ 0.46
HLA-DQB2-231ENST00000435145 SIK3Q9Y2K2 1263 aa17.93■□□□□ 0.46
HLA-DQB2-231ENST00000435145 PPEF1O14829 653 aaPredicted RBP17.92■□□□□ 0.46
HLA-DQB2-231ENST00000435145 CYP2C19P33261 490 aa17.92■□□□□ 0.46
HLA-DQB2-231ENST00000435145 SHMT1P34896 483 aa17.92■□□□□ 0.46
HLA-DQB2-231ENST00000435145 PICALMQ13492 652 aa17.92■□□□□ 0.46
HLA-DQB2-231ENST00000435145 SLC27A3Q5K4L6 730 aa17.92■□□□□ 0.46
HLA-DQB2-231ENST00000435145 CCDC122Q5T0U0 273 aa17.92■□□□□ 0.46
HLA-DQB2-231ENST00000435145 FKBP15Q5T1M5 1219 aa17.92■□□□□ 0.46
HLA-DQB2-231ENST00000435145 CLEC10AQ8IUN9 316 aa17.92■□□□□ 0.46
HLA-DQB2-231ENST00000435145 ADGRF4Q8IZF3 695 aa17.92■□□□□ 0.46
HLA-DQB2-231ENST00000435145 EEF2KMTQ96G04 330 aa17.92■□□□□ 0.46
HLA-DQB2-231ENST00000435145 NUDT12Q9BQG2 462 aa17.92■□□□□ 0.46
HLA-DQB2-231ENST00000435145 ATP6V0A2Q9Y487 856 aa17.92■□□□□ 0.46
HLA-DQB2-231ENST00000435145 RCCD1A6NED2 376 aa17.91■□□□□ 0.46
HLA-DQB2-231ENST00000435145 OAS2P29728 719 aaKnown RBP17.91■□□□□ 0.46
HLA-DQB2-231ENST00000435145 LRRC63Q05C16 580 aa17.91■□□□□ 0.46
HLA-DQB2-231ENST00000435145 VWA3BQ502W6 1294 aa17.91■□□□□ 0.46
HLA-DQB2-231ENST00000435145 LRRC55Q6ZSA7 311 aa17.91■□□□□ 0.46
HLA-DQB2-231ENST00000435145 NOA1Q8NC60 698 aaKnown RBP17.91■□□□□ 0.46
HLA-DQB2-231ENST00000435145 JAKMIP2Q96AA8 810 aa17.91■□□□□ 0.46
HLA-DQB2-231ENST00000435145 LRRC27Q9C0I9 530 aa17.91■□□□□ 0.46
HLA-DQB2-231ENST00000435145 GPCPD1Q9NPB8 672 aa17.91■□□□□ 0.46
HLA-DQB2-231ENST00000435145 L1RE1Q9UN81 338 aa17.91■□□□□ 0.46
HLA-DQB2-231ENST00000435145 POTEMA6NI47 508 aa17.91■□□□□ 0.46
HLA-DQB2-231ENST00000435145 KRT86O43790 486 aa17.91■□□□□ 0.46
HLA-DQB2-231ENST00000435145 PSMD2Q13200 908 aa17.91■□□□□ 0.46
HLA-DQB2-231ENST00000435145 KCNK18Q7Z418 384 aa17.91■□□□□ 0.46
HLA-DQB2-231ENST00000435145 HAS1Q92839 578 aa17.91■□□□□ 0.46
HLA-DQB2-231ENST00000435145 LACRTQ9GZZ8 138 aa17.91■□□□□ 0.46
HLA-DQB2-231ENST00000435145 ERLIN1O75477 346 aa17.9■□□□□ 0.46
HLA-DQB2-231ENST00000435145 FGFR1OPO95684 399 aaKnown RBP17.9■□□□□ 0.46
HLA-DQB2-231ENST00000435145 MAN2A1Q16706 1144 aa17.9■□□□□ 0.46
HLA-DQB2-231ENST00000435145 HYIQ5T013 277 aa17.9■□□□□ 0.46
HLA-DQB2-231ENST00000435145 GPATCH4Q5T3I0 446 aaKnown RBP17.9■□□□□ 0.46
HLA-DQB2-231ENST00000435145 NCAPH2Q6IBW4 605 aa17.9■□□□□ 0.46
HLA-DQB2-231ENST00000435145 WDR93Q6P2C0 686 aa17.9■□□□□ 0.46
HLA-DQB2-231ENST00000435145 KIAA1328Q86T90 577 aa17.9■□□□□ 0.46
HLA-DQB2-231ENST00000435145 SNX29Q8TEQ0 813 aa17.9■□□□□ 0.46
HLA-DQB2-231ENST00000435145 CDK5RAP3Q96JB5 506 aa17.9■□□□□ 0.46
HLA-DQB2-231ENST00000435145 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.9■□□□□ 0.46
HLA-DQB2-231ENST00000435145 PLAGL2Q9UPG8 496 aa17.9■□□□□ 0.46
HLA-DQB2-231ENST00000435145 ANO9A1A5B4 782 aa17.89■□□□□ 0.46
HLA-DQB2-231ENST00000435145 ATP1A1P05023 1023 aaKnown RBP17.89■□□□□ 0.46
HLA-DQB2-231ENST00000435145 GCFC2P16383 781 aaKnown RBP17.89■□□□□ 0.46
HLA-DQB2-231ENST00000435145 TNNI2P48788 182 aa17.89■□□□□ 0.46
HLA-DQB2-231ENST00000435145 EIF6P56537 245 aaKnown RBP17.89■□□□□ 0.46
HLA-DQB2-231ENST00000435145 VSNL1P62760 191 aa17.89■□□□□ 0.46
HLA-DQB2-231ENST00000435145 SEPT2Q15019 361 aa17.89■□□□□ 0.46
HLA-DQB2-231ENST00000435145 KRT79Q5XKE5 535 aa17.89■□□□□ 0.46
HLA-DQB2-231ENST00000435145 SEPT12Q8IYM1 358 aa17.89■□□□□ 0.46
HLA-DQB2-231ENST00000435145 NDST4Q9H3R1 872 aa17.89■□□□□ 0.46
HLA-DQB2-231ENST00000435145 TFR2Q9UP52 801 aa17.89■□□□□ 0.46
HLA-DQB2-231ENST00000435145 ATF5Q9Y2D1 282 aaPredicted RBP17.89■□□□□ 0.46
HLA-DQB2-231ENST00000435145 ANKRD31Q8N7Z5 1873 aa17.89■□□□□ 0.45
HLA-DQB2-231ENST00000435145 ZBTB5O15062 677 aa17.89■□□□□ 0.45
HLA-DQB2-231ENST00000435145 VAV2P52735 878 aa17.89■□□□□ 0.45
HLA-DQB2-231ENST00000435145 UBE2SQ16763 222 aa17.89■□□□□ 0.45
HLA-DQB2-231ENST00000435145 ZCWPW2Q504Y3 356 aa17.89■□□□□ 0.45
HLA-DQB2-231ENST00000435145 TTBK2Q6IQ55 1244 aa17.89■□□□□ 0.45
HLA-DQB2-231ENST00000435145 HDXQ7Z353 690 aa17.89■□□□□ 0.45
HLA-DQB2-231ENST00000435145 DDX12PQ92771 950 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms