RNA–Protein interactions for RNA: ENST00000435039.3

PCOTH-203, Transcript of Pro-X-Gly collagen triple helix like repeat containing, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCOTH, Length 542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOTH-203ENST00000435039 ANKRD23Q86SG2 305 aa12.89□□□□□ -0.35
PCOTH-203ENST00000435039 REM2Q8IYK8 340 aaPredicted RBP12.89□□□□□ -0.35
PCOTH-203ENST00000435039 CPXCR1Q8N123 301 aa12.89□□□□□ -0.35
PCOTH-203ENST00000435039 CRYGNQ8WXF5 182 aa12.89□□□□□ -0.35
PCOTH-203ENST00000435039 SYAP1Q96A49 352 aaPredicted RBP12.89□□□□□ -0.35
PCOTH-203ENST00000435039 FBXO2Q9UK22 296 aaPredicted RBP12.89□□□□□ -0.35
PCOTH-203ENST00000435039 RABGAP1Q9Y3P9 1069 aa12.89□□□□□ -0.35
PCOTH-203ENST00000435039 SRPRBQ9Y5M8 271 aaKnown RBP12.89□□□□□ -0.35
PCOTH-203ENST00000435039 LCTP09848 1927 aa12.89□□□□□ -0.35
PCOTH-203ENST00000435039 CCNT1O60563 726 aaKnown RBP12.88□□□□□ -0.35
PCOTH-203ENST00000435039 MARCKSP29966 332 aaPredicted RBP12.88□□□□□ -0.35
PCOTH-203ENST00000435039 MCM7P33993 719 aa12.88□□□□□ -0.35
PCOTH-203ENST00000435039 PRPHP41219 470 aa12.88□□□□□ -0.35
PCOTH-203ENST00000435039 USP11P51784 963 aa12.88□□□□□ -0.35
PCOTH-203ENST00000435039 ARHGAP4P98171 946 aa12.88□□□□□ -0.35
PCOTH-203ENST00000435039 PTGDRQ13258 359 aa12.88□□□□□ -0.35
PCOTH-203ENST00000435039 ZNF174Q15697 407 aa12.88□□□□□ -0.35
PCOTH-203ENST00000435039 CCDC73Q6ZRK6 1079 aa12.88□□□□□ -0.35
PCOTH-203ENST00000435039 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.88□□□□□ -0.35
PCOTH-203ENST00000435039 ZNF579Q8NAF0 562 aaKnown RBP12.88□□□□□ -0.35
PCOTH-203ENST00000435039 BRI3BPQ8WY22 251 aa12.88□□□□□ -0.35
PCOTH-203ENST00000435039 TRERF1Q96PN7 1200 aa12.88□□□□□ -0.35
PCOTH-203ENST00000435039 P2RX7Q99572 595 aaKnown RBP12.88□□□□□ -0.35
PCOTH-203ENST00000435039 ANP32EQ9BTT0 268 aa12.88□□□□□ -0.35
PCOTH-203ENST00000435039 ACAD9Q9H845 621 aa12.88□□□□□ -0.35
PCOTH-203ENST00000435039 LRRC37A2A6NM11 1700 aa12.88□□□□□ -0.35
PCOTH-203ENST00000435039 RPTORQ8N122 1335 aa12.88□□□□□ -0.35
PCOTH-203ENST00000435039 CYP3A7-CYP3A51PA0A087WV96 503 aa12.87□□□□□ -0.35
PCOTH-203ENST00000435039 FAM237AA0A1B0GTK4 181 aa12.87□□□□□ -0.35
PCOTH-203ENST00000435039 TESPA1A2RU30 521 aaPredicted RBP12.87□□□□□ -0.35
PCOTH-203ENST00000435039 CYP3A4P08684 503 aa12.87□□□□□ -0.35
PCOTH-203ENST00000435039 OR52Z1P0C646 297 aa12.87□□□□□ -0.35
PCOTH-203ENST00000435039 CMA1P23946 247 aa12.87□□□□□ -0.35
PCOTH-203ENST00000435039 CYP3A7P24462 503 aa12.87□□□□□ -0.35
PCOTH-203ENST00000435039 HOXA13P31271 388 aaPredicted RBP12.87□□□□□ -0.35
PCOTH-203ENST00000435039 STAT3P40763 770 aa12.87□□□□□ -0.35
PCOTH-203ENST00000435039 MUM1L1Q5H9M0 696 aa12.87□□□□□ -0.35
PCOTH-203ENST00000435039 RIOX2Q8IUF8 465 aa12.87□□□□□ -0.35
PCOTH-203ENST00000435039 FSIP1Q8NA03 581 aa12.87□□□□□ -0.35
PCOTH-203ENST00000435039 CHST13Q8NET6 341 aa12.87□□□□□ -0.35
PCOTH-203ENST00000435039 MBOAT7Q96N66 472 aa12.87□□□□□ -0.35
PCOTH-203ENST00000435039 SPATC1LQ9H0A9 340 aa12.87□□□□□ -0.35
PCOTH-203ENST00000435039 ZCCHC17Q9NP64 241 aaKnown RBP12.87□□□□□ -0.35
PCOTH-203ENST00000435039 HOMER2Q9NSB8 354 aa12.87□□□□□ -0.35
PCOTH-203ENST00000435039 DDX19AQ9NUU7 478 aaKnown RBP12.87□□□□□ -0.35
PCOTH-203ENST00000435039 FBXO40Q9UH90 709 aa12.87□□□□□ -0.35
PCOTH-203ENST00000435039 ZNF236Q9UL36 1845 aa12.86□□□□□ -0.35
PCOTH-203ENST00000435039 MANSC4A6NHS7 340 aaPredicted RBP12.86□□□□□ -0.35
PCOTH-203ENST00000435039 CNMDO75829 334 aa12.86□□□□□ -0.35
PCOTH-203ENST00000435039 TDP2O95551 362 aa12.86□□□□□ -0.35
PCOTH-203ENST00000435039 CIITAP33076 1130 aa12.86□□□□□ -0.35
PCOTH-203ENST00000435039 FAM160A1Q05DH4 1040 aa12.86□□□□□ -0.35
PCOTH-203ENST00000435039 CCDC183Q5T5S1 534 aa12.86□□□□□ -0.35
PCOTH-203ENST00000435039 RESP18Q5W5W9 173 aa12.86□□□□□ -0.35
PCOTH-203ENST00000435039 CAVIN1Q6NZI2 390 aaKnown RBP12.86□□□□□ -0.35
PCOTH-203ENST00000435039 SLC30A10Q6XR72 485 aa12.86□□□□□ -0.35
PCOTH-203ENST00000435039 CTU1Q7Z7A3 348 aaKnown RBP12.86□□□□□ -0.35
PCOTH-203ENST00000435039 POTEDQ86YR6 584 aa12.86□□□□□ -0.35
PCOTH-203ENST00000435039 CCAR1Q8IX12 1150 aaKnown RBP12.86□□□□□ -0.35
PCOTH-203ENST00000435039 C4orf32Q8N8J7 132 aa12.86□□□□□ -0.35
PCOTH-203ENST00000435039 PARK7Q99497 189 aaKnown RBP12.86□□□□□ -0.35
PCOTH-203ENST00000435039 BTBD7Q9P203 1132 aa12.86□□□□□ -0.35
PCOTH-203ENST00000435039 DDX25Q9UHL0 483 aaKnown RBP12.86□□□□□ -0.35
PCOTH-203ENST00000435039 RIPK3Q9Y572 518 aa12.86□□□□□ -0.35
PCOTH-203ENST00000435039 PFASO15067 1338 aa12.86□□□□□ -0.35
PCOTH-203ENST00000435039 BTBD19C9JJ37 291 aa12.85□□□□□ -0.35
PCOTH-203ENST00000435039 PDHXO00330 501 aa12.85□□□□□ -0.35
PCOTH-203ENST00000435039 SLC37A4O43826 429 aa12.85□□□□□ -0.35
PCOTH-203ENST00000435039 EDIL3O43854 480 aa12.85□□□□□ -0.35
PCOTH-203ENST00000435039 SLC25A27O95847 323 aa12.85□□□□□ -0.35
PCOTH-203ENST00000435039 LIG1P18858 919 aa12.85□□□□□ -0.35
PCOTH-203ENST00000435039 LONP1P36776 959 aaKnown RBP12.85□□□□□ -0.35
PCOTH-203ENST00000435039 SOX10P56693 466 aa12.85□□□□□ -0.35
PCOTH-203ENST00000435039 RPS6P62753 249 aaKnown RBP12.85□□□□□ -0.35
PCOTH-203ENST00000435039 SETQ01105 290 aaPredicted RBP12.85□□□□□ -0.35
PCOTH-203ENST00000435039 MKRN3Q13064 507 aaKnown RBP12.85□□□□□ -0.35
PCOTH-203ENST00000435039 PLS1Q14651 629 aa12.85□□□□□ -0.35
PCOTH-203ENST00000435039 CALCRLQ16602 461 aa12.85□□□□□ -0.35
PCOTH-203ENST00000435039 Q4G0T1 1027 aa12.85□□□□□ -0.35
PCOTH-203ENST00000435039 SHC4Q6S5L8 630 aa12.85□□□□□ -0.35
PCOTH-203ENST00000435039 POTEEQ6S8J3 1075 aa12.85□□□□□ -0.35
PCOTH-203ENST00000435039 RNF207Q6ZRF8 634 aa12.85□□□□□ -0.35
PCOTH-203ENST00000435039 FCHSD1Q86WN1 690 aa12.85□□□□□ -0.35
PCOTH-203ENST00000435039 SYTL5Q8TDW5 730 aaPredicted RBP12.85□□□□□ -0.35
PCOTH-203ENST00000435039 PAGR1Q9BTK6 254 aa12.85□□□□□ -0.35
PCOTH-203ENST00000435039 TMEM60Q9H2L4 133 aa12.85□□□□□ -0.35
PCOTH-203ENST00000435039 GOLPH3LQ9H4A5 285 aa12.85□□□□□ -0.35
PCOTH-203ENST00000435039 HPSEQ9Y251 543 aa12.85□□□□□ -0.35
PCOTH-203ENST00000435039 PLXNB2O15031 1838 aa12.85□□□□□ -0.35
PCOTH-203ENST00000435039 VWA3AA6NCI4 1184 aa12.84□□□□□ -0.35
PCOTH-203ENST00000435039 TBX3O15119 743 aa12.84□□□□□ -0.35
PCOTH-203ENST00000435039 PFKFB1P16118 471 aa12.84□□□□□ -0.35
PCOTH-203ENST00000435039 GCLCP48506 637 aaPredicted RBP12.84□□□□□ -0.35
PCOTH-203ENST00000435039 NSMFQ6X4W1 530 aa12.84□□□□□ -0.35
PCOTH-203ENST00000435039 DTHD1Q6ZMT9 781 aa12.84□□□□□ -0.35
PCOTH-203ENST00000435039 SHCBP1Q8NEM2 672 aa12.84□□□□□ -0.35
PCOTH-203ENST00000435039 ENGASEQ8NFI3 743 aa12.84□□□□□ -0.35
PCOTH-203ENST00000435039 SMCR8Q8TEV9 937 aaPredicted RBP12.84□□□□□ -0.35
PCOTH-203ENST00000435039 TBC1D5Q92609 795 aa12.84□□□□□ -0.35
PCOTH-203ENST00000435039 AK8Q96MA6 479 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms