RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 POTECB2RU33 542 aa17.38■□□□□ 0.37
SCARF1-203ENST00000434376 PLEKP08567 350 aaPredicted RBP17.38■□□□□ 0.37
SCARF1-203ENST00000434376 SHMT1P34896 483 aa17.38■□□□□ 0.37
SCARF1-203ENST00000434376 ECE1P42892 770 aa17.38■□□□□ 0.37
SCARF1-203ENST00000434376 RNASE9P60153 205 aaKnown RBP17.38■□□□□ 0.37
SCARF1-203ENST00000434376 ERVK-24P63145 666 aa17.38■□□□□ 0.37
SCARF1-203ENST00000434376 PPP2R3AQ06190 1150 aa17.38■□□□□ 0.37
SCARF1-203ENST00000434376 POTEBQ6S5H4 581 aa17.38■□□□□ 0.37
SCARF1-203ENST00000434376 SV2BQ7L1I2 683 aa17.38■□□□□ 0.37
SCARF1-203ENST00000434376 NLGN1Q8N2Q7 840 aa17.38■□□□□ 0.37
SCARF1-203ENST00000434376 TBC1D5Q92609 795 aa17.38■□□□□ 0.37
SCARF1-203ENST00000434376 CNOT6LQ96LI5 555 aaKnown RBP17.38■□□□□ 0.37
SCARF1-203ENST00000434376 CSRNP1Q96S65 589 aa17.38■□□□□ 0.37
SCARF1-203ENST00000434376 L2HGDHQ9H9P8 463 aa17.38■□□□□ 0.37
SCARF1-203ENST00000434376 ZNF277Q9NRM2 450 aaPredicted RBP17.38■□□□□ 0.37
SCARF1-203ENST00000434376 LUC7L2Q9Y383 392 aaKnown RBP17.38■□□□□ 0.37
SCARF1-203ENST00000434376 PSDA5PKW4 1024 aaPredicted RBP17.37■□□□□ 0.37
SCARF1-203ENST00000434376 MYMKA6NI61 221 aa17.37■□□□□ 0.37
SCARF1-203ENST00000434376 MFAP3LO75121 409 aa17.37■□□□□ 0.37
SCARF1-203ENST00000434376 TMEM266Q2M3C6 531 aa17.37■□□□□ 0.37
SCARF1-203ENST00000434376 QRICH1Q2TAL8 776 aa17.37■□□□□ 0.37
SCARF1-203ENST00000434376 COA1Q9GZY4 146 aa17.37■□□□□ 0.37
SCARF1-203ENST00000434376 PABPC4Q13310 644 aaKnown RBP eCLIP17.37■□□□□ 0.37
SCARF1-203ENST00000434376 KIFC2Q96AC6 838 aa17.37■□□□□ 0.37
SCARF1-203ENST00000434376 PRMT6Q96LA8 375 aaPredicted RBP17.37■□□□□ 0.37
SCARF1-203ENST00000434376 TRIM9Q9C026 710 aa17.37■□□□□ 0.37
SCARF1-203ENST00000434376 PCDHA12Q9UN75 941 aa17.37■□□□□ 0.37
SCARF1-203ENST00000434376 CHD4Q14839 1912 aa17.37■□□□□ 0.37
SCARF1-203ENST00000434376 AHDC1Q5TGY3 1603 aaPredicted RBP17.37■□□□□ 0.37
SCARF1-203ENST00000434376 SASH3O75995 380 aa17.37■□□□□ 0.37
SCARF1-203ENST00000434376 TRAPPC10P48553 1259 aa17.37■□□□□ 0.37
SCARF1-203ENST00000434376 DGKZQ13574 1117 aa17.37■□□□□ 0.37
SCARF1-203ENST00000434376 ZSCAN26Q16670 478 aa17.37■□□□□ 0.37
SCARF1-203ENST00000434376 NT5DC1Q5TFE4 455 aa17.37■□□□□ 0.37
SCARF1-203ENST00000434376 SP8Q8IXZ3 490 aa17.37■□□□□ 0.37
SCARF1-203ENST00000434376 CPXCR1Q8N123 301 aa17.37■□□□□ 0.37
SCARF1-203ENST00000434376 ZMYND12Q9H0C1 365 aa17.37■□□□□ 0.37
SCARF1-203ENST00000434376 IKZF4Q9H2S9 585 aa17.37■□□□□ 0.37
SCARF1-203ENST00000434376 DEF6Q9H4E7 631 aa17.37■□□□□ 0.37
SCARF1-203ENST00000434376 RMND1Q9NWS8 449 aa17.37■□□□□ 0.37
SCARF1-203ENST00000434376 VPS18Q9P253 973 aa17.37■□□□□ 0.37
SCARF1-203ENST00000434376 FZD1Q9UP38 647 aa17.37■□□□□ 0.37
SCARF1-203ENST00000434376 IRS2Q9Y4H2 1338 aa17.36■□□□□ 0.37
SCARF1-203ENST00000434376 TRAF5O00463 557 aa17.36■□□□□ 0.37
SCARF1-203ENST00000434376 ECM1Q16610 540 aa17.36■□□□□ 0.37
SCARF1-203ENST00000434376 POTEFA5A3E0 1075 aa17.36■□□□□ 0.37
SCARF1-203ENST00000434376 STX10O60499 249 aa17.36■□□□□ 0.37
SCARF1-203ENST00000434376 POTEIP0CG38 1075 aa17.36■□□□□ 0.37
SCARF1-203ENST00000434376 TDRD12Q587J7 1177 aaKnown RBP17.36■□□□□ 0.37
SCARF1-203ENST00000434376 TCERG1LQ5VWI1 586 aa17.36■□□□□ 0.37
SCARF1-203ENST00000434376 POTEGQ6S5H5 508 aa17.36■□□□□ 0.37
SCARF1-203ENST00000434376 POTEEQ6S8J3 1075 aa17.36■□□□□ 0.37
SCARF1-203ENST00000434376 DEFB132Q7Z7B7 95 aa17.36■□□□□ 0.37
SCARF1-203ENST00000434376 ADGRG1Q9Y653 693 aa17.36■□□□□ 0.37
SCARF1-203ENST00000434376 HERC4Q5GLZ8 1057 aaPredicted RBP17.36■□□□□ 0.37
SCARF1-203ENST00000434376 APTXQ7Z2E3 356 aaKnown RBP17.36■□□□□ 0.37
SCARF1-203ENST00000434376 DDX12PQ92771 950 aa17.36■□□□□ 0.37
SCARF1-203ENST00000434376 FGFBP2Q9BYJ0 223 aa17.36■□□□□ 0.37
SCARF1-203ENST00000434376 RSPH14Q9UHP6 348 aa17.36■□□□□ 0.37
SCARF1-203ENST00000434376 CCP110O43303 1012 aa17.35■□□□□ 0.37
SCARF1-203ENST00000434376 NPR1P16066 1061 aa17.35■□□□□ 0.37
SCARF1-203ENST00000434376 JAG1P78504 1218 aa17.35■□□□□ 0.37
SCARF1-203ENST00000434376 IRF2BP1Q8IU81 584 aa17.35■□□□□ 0.37
SCARF1-203ENST00000434376 DNAJC18Q9H819 358 aa17.35■□□□□ 0.37
SCARF1-203ENST00000434376 SUGCTQ9HAC7 445 aa17.35■□□□□ 0.37
SCARF1-203ENST00000434376 MYO1BO43795 1136 aa17.35■□□□□ 0.37
SCARF1-203ENST00000434376 TADA3O75528 432 aa17.35■□□□□ 0.37
SCARF1-203ENST00000434376 ZNF543Q08ER8 600 aa17.35■□□□□ 0.37
SCARF1-203ENST00000434376 EZH2Q15910 746 aaKnown RBP17.35■□□□□ 0.37
SCARF1-203ENST00000434376 CCDC40Q4G0X9 1142 aa17.35■□□□□ 0.37
SCARF1-203ENST00000434376 CCDC102AQ96A19 550 aa17.35■□□□□ 0.37
SCARF1-203ENST00000434376 CTAGE1Q96RT6 745 aa17.35■□□□□ 0.37
SCARF1-203ENST00000434376 PARD6BQ9BYG5 372 aa17.35■□□□□ 0.37
SCARF1-203ENST00000434376 CXCR5P32302 372 aa17.34■□□□□ 0.37
SCARF1-203ENST00000434376 CDC37Q16543 378 aaPredicted RBP17.34■□□□□ 0.37
SCARF1-203ENST00000434376 PRAMEF18Q5VWM3 479 aa17.34■□□□□ 0.37
SCARF1-203ENST00000434376 ADSSL1Q8N142 457 aa17.34■□□□□ 0.37
SCARF1-203ENST00000434376 TXLNBQ8N3L3 684 aa17.34■□□□□ 0.37
SCARF1-203ENST00000434376 SPATA20Q8TB22 786 aa17.34■□□□□ 0.37
SCARF1-203ENST00000434376 LARP4BQ92615 738 aaKnown RBP17.34■□□□□ 0.37
SCARF1-203ENST00000434376 ABHD10Q9NUJ1 306 aa17.34■□□□□ 0.37
SCARF1-203ENST00000434376 RWDD2AQ9UIY3 292 aa17.34■□□□□ 0.37
SCARF1-203ENST00000434376 SPATA31A6Q5VVP1 1343 aa17.34■□□□□ 0.37
SCARF1-203ENST00000434376 ADRA2BP18089 450 aa17.34■□□□□ 0.37
SCARF1-203ENST00000434376 PRKG1Q13976 671 aa17.34■□□□□ 0.37
SCARF1-203ENST00000434376 CCDC122Q5T0U0 273 aa17.34■□□□□ 0.37
SCARF1-203ENST00000434376 ACER1Q8TDN7 264 aa17.34■□□□□ 0.37
SCARF1-203ENST00000434376 PIGOQ8TEQ8 1089 aa17.34■□□□□ 0.37
SCARF1-203ENST00000434376 MMTAG2Q9BU76 263 aaKnown RBP17.34■□□□□ 0.37
SCARF1-203ENST00000434376 F5H6K3 240 aa17.34■□□□□ 0.37
SCARF1-203ENST00000434376 IPO7O95373 1038 aaKnown RBP17.34■□□□□ 0.37
SCARF1-203ENST00000434376 ALDH1B1P30837 517 aa17.34■□□□□ 0.37
SCARF1-203ENST00000434376 KLRC3Q07444 240 aa17.34■□□□□ 0.37
SCARF1-203ENST00000434376 ARL6IP4Q66PJ3 421 aaKnown RBP17.34■□□□□ 0.37
SCARF1-203ENST00000434376 TMC4Q7Z404 712 aa17.34■□□□□ 0.37
SCARF1-203ENST00000434376 CUL5Q93034 780 aa17.34■□□□□ 0.37
SCARF1-203ENST00000434376 FBXO28Q9NVF7 368 aa17.34■□□□□ 0.37
SCARF1-203ENST00000434376 LTBP4Q8N2S1 1624 aa17.33■□□□□ 0.37
SCARF1-203ENST00000434376 ZBTB39O15060 712 aa17.33■□□□□ 0.37
SCARF1-203ENST00000434376 SP4Q02446 784 aa17.33■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms